RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeastyeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN4YDL020C RPN1P38764 993 aaKnown RBP7.64□□□□□ -1.19
RPN4YDL020C DSF2P38213 736 aa7.63□□□□□ -1.19
RPN4YDL020C MSB4Q12317 492 aa7.63□□□□□ -1.19
RPN4YDL020C RTG1P32607 177 aa7.61□□□□□ -1.19
RPN4YDL020C REF2P42073 533 aaPredicted RBP7.61□□□□□ -1.19
RPN4YDL020C EAP1P36041 632 aaKnown RBP7.59□□□□□ -1.19
RPN4YDL020C NCR1Q12200 1170 aa7.58□□□□□ -1.2
RPN4YDL020C ATH1P48016 1211 aa7.56□□□□□ -1.2
RPN4YDL020C SAM3Q08986 587 aa7.56□□□□□ -1.2
RPN4YDL020C GRE2Q12068 342 aaKnown RBP7.56□□□□□ -1.2
RPN4YDL020C TRP5P00931 707 aaKnown RBP7.55□□□□□ -1.2
RPN4YDL020C MAM3Q12296 706 aa7.54□□□□□ -1.2
RPN4YDL020C GUT1P32190 709 aa7.54□□□□□ -1.2
RPN4YDL020C YOL036WQ08206 761 aa7.53□□□□□ -1.2
RPN4YDL020C SET4P42948 560 aa7.52□□□□□ -1.21
RPN4YDL020C MAK21Q12176 1025 aaKnown RBP7.52□□□□□ -1.21
RPN4YDL020C GYP5Q12344 894 aa7.51□□□□□ -1.21
RPN4YDL020C SEC61P32915 480 aa7.5□□□□□ -1.21
RPN4YDL020C IES2P40154 320 aa7.5□□□□□ -1.21
RPN4YDL020C YNL035CP53962 389 aaKnown RBP7.5□□□□□ -1.21
RPN4YDL020C COX6P00427 148 aa7.5□□□□□ -1.21
RPN4YDL020C VHR2P40041 505 aa7.49□□□□□ -1.21
RPN4YDL020C YNR021WP53723 404 aaKnown RBP7.49□□□□□ -1.21
RPN4YDL020C UBP14P38237 781 aaKnown RBP7.47□□□□□ -1.21
RPN4YDL020C YGR273CP53329 174 aa7.46□□□□□ -1.21
RPN4YDL020C NUP42P49686 430 aaKnown RBP7.46□□□□□ -1.22
RPN4YDL020C DIT2P21595 489 aa7.45□□□□□ -1.22
RPN4YDL020C BCK2P33306 851 aa7.45□□□□□ -1.22
RPN4YDL020C YDR090CQ03193 310 aa7.45□□□□□ -1.22
RPN4YDL020C DCW1P36091 449 aa7.44□□□□□ -1.22
RPN4YDL020C YLR326WQ06170 240 aaKnown RBP7.44□□□□□ -1.22
RPN4YDL020C ABP1P15891 592 aaKnown RBP7.43□□□□□ -1.22
RPN4YDL020C GLC3P32775 704 aa7.43□□□□□ -1.22
RPN4YDL020C SOL3P38858 249 aa7.43□□□□□ -1.22
RPN4YDL020C KIN1P13185 1064 aa7.41□□□□□ -1.22
RPN4YDL020C DMA2P53924 522 aa7.41□□□□□ -1.22
RPN4YDL020C KEX1P09620 729 aa7.4□□□□□ -1.22
RPN4YDL020C KIC1P38692 1080 aa7.4□□□□□ -1.22
RPN4YDL020C AIM7Q12156 149 aa7.4□□□□□ -1.22
RPN4YDL020C HTA1P04911 132 aaKnown RBP7.39□□□□□ -1.23
RPN4YDL020C HTA2P04912 132 aa7.39□□□□□ -1.23
RPN4YDL020C RAD54P32863 898 aa7.38□□□□□ -1.23
RPN4YDL020C SAP30P38429 201 aa7.38□□□□□ -1.23
RPN4YDL020C PCS60P38137 543 aaKnown RBP RIP-Chip data7.37□□□□□ -1.23 RIP-Chip
RPN4YDL020C NST1P53935 1240 aa7.37□□□□□ -1.23
RPN4YDL020C TFG1P41895 735 aaPredicted RBP7.37□□□□□ -1.23
RPN4YDL020C CHL1P22516 861 aaPredicted RBP7.35□□□□□ -1.23
RPN4YDL020C ATF2P53296 535 aa7.35□□□□□ -1.23
RPN4YDL020C DAN4P47179 1161 aa7.34□□□□□ -1.23
RPN4YDL020C AI4P03878 556 aa7.33□□□□□ -1.24
RPN4YDL020C MPH3P0CE00 602 aa7.33□□□□□ -1.24
RPN4YDL020C ILV3P39522 585 aaKnown RBP7.31□□□□□ -1.24
RPN4YDL020C YEL023CP39992 682 aa7.31□□□□□ -1.24
RPN4YDL020C PRE3P38624 215 aa7.3□□□□□ -1.24
RPN4YDL020C YDL129WQ07555 291 aa7.3□□□□□ -1.24
RPN4YDL020C PSE1P32337 1089 aaKnown RBP7.29□□□□□ -1.24
RPN4YDL020C ORC6P38826 435 aa7.28□□□□□ -1.24
RPN4YDL020C JIP4Q03361 876 aa7.28□□□□□ -1.24
RPN4YDL020C PTC4P38089 393 aa7.26□□□□□ -1.25
RPN4YDL020C GUA1P38625 525 aaKnown RBP7.25□□□□□ -1.25
RPN4YDL020C RGA2Q06407 1009 aa7.25□□□□□ -1.25
RPN4YDL020C SLI15P38283 698 aa7.24□□□□□ -1.25
RPN4YDL020C XDJ1P39102 459 aa7.21□□□□□ -1.25
RPN4YDL020C HGH1P48362 394 aaKnown RBP7.21□□□□□ -1.25
RPN4YDL020C RPP1BP10622 106 aaKnown RBP7.2□□□□□ -1.26
RPN4YDL020C RGR1P19263 1082 aa7.2□□□□□ -1.26
RPN4YDL020C MVP1P40959 511 aaKnown RBP7.19□□□□□ -1.26
RPN4YDL020C TEA1P47988 759 aa7.19□□□□□ -1.26
RPN4YDL020C GAP1P19145 602 aaPredicted RBP7.18□□□□□ -1.26
RPN4YDL020C HPC2Q01448 625 aa7.18□□□□□ -1.26
RPN4YDL020C VRP1P37370 817 aa7.17□□□□□ -1.26
RPN4YDL020C CSC1Q06538 782 aa7.17□□□□□ -1.26
RPN4YDL020C CDC73Q06697 393 aa7.17□□□□□ -1.26
RPN4YDL020C CLB5P30283 435 aa7.16□□□□□ -1.26
RPN4YDL020C CSN12P47130 423 aa7.15□□□□□ -1.27
RPN4YDL020C YDR344CQ05510 147 aa7.15□□□□□ -1.27
RPN4YDL020C PML39Q03760 334 aa7.14□□□□□ -1.27
RPN4YDL020C RLF2Q12495 606 aa7.14□□□□□ -1.27
RPN4YDL020C SSA2P10592 639 aaKnown RBP7.13□□□□□ -1.27
RPN4YDL020C MID1P41821 548 aa7.13□□□□□ -1.27
RPN4YDL020C TFB3Q03290 321 aa7.12□□□□□ -1.27
RPN4YDL020C YPR109WQ06104 294 aa7.12□□□□□ -1.27
RPN4YDL020C TFB4Q12004 338 aa7.12□□□□□ -1.27
RPN4YDL020C DPS1P04802 557 aaKnown RBP7.12□□□□□ -1.27
RPN4YDL020C PEX21P50091 288 aa7.12□□□□□ -1.27
RPN4YDL020C BRL1P38770 471 aa7.11□□□□□ -1.27
RPN4YDL020C DPL1Q05567 589 aa7.11□□□□□ -1.27
RPN4YDL020C MPC54Q08550 464 aa7.1□□□□□ -1.27
RPN4YDL020C NIS1P53939 407 aa7.09□□□□□ -1.27
RPN4YDL020C KTR1P27810 393 aaKnown RBP7.08□□□□□ -1.28
RPN4YDL020C TUM1Q08686 304 aaKnown RBP7.08□□□□□ -1.28
RPN4YDL020C TYW1Q08960 810 aaKnown RBP7.08□□□□□ -1.28
RPN4YDL020C FPK1P53739 893 aa7.07□□□□□ -1.28
RPN4YDL020C PEX29Q03370 554 aa7.07□□□□□ -1.28
RPN4YDL020C YMR196WQ04336 1088 aa7.07□□□□□ -1.28
RPN4YDL020C PKC1P24583 1151 aa7.05□□□□□ -1.28
RPN4YDL020C HST2P53686 357 aa7.05□□□□□ -1.28
RPN4YDL020C GLN1P32288 370 aaKnown RBP7.04□□□□□ -1.28
RPN4YDL020C ISU2Q12056 156 aa7.04□□□□□ -1.28
RPN4YDL020C YRR1Q12172 810 aa7.04□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms