RNA–Protein interactions for RNA: YCR028C-A

RIM1, Transcript of ssDNA-binding protein essential for mitochondrial genome maintenance, yeastyeast

Gene RIM1, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIM1YCR028C-A CHL1P22516 861 aaPredicted RBP7.59□□□□□ -1.19
RIM1YCR028C-A COQ8P27697 501 aa7.59□□□□□ -1.19
RIM1YCR028C-A YDL129WQ07555 291 aa7.57□□□□□ -1.2
RIM1YCR028C-A PRE3P38624 215 aa7.56□□□□□ -1.2
RIM1YCR028C-A EDS1P38073 919 aa7.55□□□□□ -1.2
RIM1YCR028C-A JIP4Q03361 876 aa7.53□□□□□ -1.2
RIM1YCR028C-A PTC3P34221 468 aaKnown RBP7.51□□□□□ -1.21
RIM1YCR028C-A DCW1P36091 449 aa7.51□□□□□ -1.21
RIM1YCR028C-A YDR344CQ05510 147 aa7.51□□□□□ -1.21
RIM1YCR028C-A GYP5Q12344 894 aa7.51□□□□□ -1.21
RIM1YCR028C-A NOP53Q12080 455 aaKnown RBP7.49□□□□□ -1.21
RIM1YCR028C-A VRP1P37370 817 aa7.48□□□□□ -1.21
RIM1YCR028C-A HTA1P04911 132 aaKnown RBP7.47□□□□□ -1.21
RIM1YCR028C-A HTA2P04912 132 aa7.47□□□□□ -1.21
RIM1YCR028C-A YEL023CP39992 682 aa7.47□□□□□ -1.21
RIM1YCR028C-A GRE2Q12068 342 aaKnown RBP7.45□□□□□ -1.22
RIM1YCR028C-A PTC4P38089 393 aa7.44□□□□□ -1.22
RIM1YCR028C-A SAS10Q12136 610 aaPredicted RBP7.44□□□□□ -1.22
RIM1YCR028C-A IFH1P39520 1085 aa7.43□□□□□ -1.22
RIM1YCR028C-A ATH1P48016 1211 aa7.43□□□□□ -1.22
RIM1YCR028C-A VPS70P47161 811 aa7.42□□□□□ -1.22
RIM1YCR028C-A ABP1P15891 592 aaKnown RBP7.41□□□□□ -1.22
RIM1YCR028C-A GUT1P32190 709 aa7.41□□□□□ -1.22
RIM1YCR028C-A XDJ1P39102 459 aa7.41□□□□□ -1.22
RIM1YCR028C-A YPR148CQ06523 435 aa7.39□□□□□ -1.23
RIM1YCR028C-A DPS1P04802 557 aaKnown RBP7.37□□□□□ -1.23
RIM1YCR028C-A ELP4Q02884 456 aaKnown RBP7.37□□□□□ -1.23
RIM1YCR028C-A PML39Q03760 334 aa7.37□□□□□ -1.23
RIM1YCR028C-A CKB1P43639 278 aa7.32□□□□□ -1.24
RIM1YCR028C-A SOL3P38858 249 aa7.31□□□□□ -1.24
RIM1YCR028C-A YGR273CP53329 174 aa7.29□□□□□ -1.24
RIM1YCR028C-A REF2P42073 533 aaPredicted RBP7.28□□□□□ -1.24
RIM1YCR028C-A SPB4P25808 606 aaPredicted RBP7.27□□□□□ -1.25
RIM1YCR028C-A MID1P41821 548 aa7.26□□□□□ -1.25
RIM1YCR028C-A RGA2Q06407 1009 aa7.26□□□□□ -1.25
RIM1YCR028C-A VHR2P40041 505 aa7.25□□□□□ -1.25
RIM1YCR028C-A NST1P53935 1240 aa7.25□□□□□ -1.25
RIM1YCR028C-A UBP14P38237 781 aaKnown RBP7.24□□□□□ -1.25
RIM1YCR028C-A PBS2P08018 668 aa7.22□□□□□ -1.25
RIM1YCR028C-A SRC1Q03707 834 aa7.22□□□□□ -1.25
RIM1YCR028C-A MPH3P0CE00 602 aa7.21□□□□□ -1.26
RIM1YCR028C-A YLR326WQ06170 240 aaKnown RBP7.21□□□□□ -1.26
RIM1YCR028C-A AI4P03878 556 aa7.2□□□□□ -1.26
RIM1YCR028C-A KEX1P09620 729 aa7.2□□□□□ -1.26
RIM1YCR028C-A ARH1P48360 493 aa7.2□□□□□ -1.26
RIM1YCR028C-A COX6P00427 148 aa7.17□□□□□ -1.26
RIM1YCR028C-A YDR090CQ03193 310 aa7.17□□□□□ -1.26
RIM1YCR028C-A KIC1P38692 1080 aa7.16□□□□□ -1.26
RIM1YCR028C-A ILV3P39522 585 aaKnown RBP7.16□□□□□ -1.26
RIM1YCR028C-A RAD54P32863 898 aa7.15□□□□□ -1.26
RIM1YCR028C-A PCS60P38137 543 aaKnown RBP RIP-Chip data7.15□□□□□ -1.26not detected
RIM1YCR028C-A DSF2P38213 736 aa7.15□□□□□ -1.26
RIM1YCR028C-A PEX29Q03370 554 aa7.15□□□□□ -1.26
RIM1YCR028C-A MAK21Q12176 1025 aaKnown RBP7.15□□□□□ -1.26
RIM1YCR028C-A SPT23P35210 1082 aa7.13□□□□□ -1.27
RIM1YCR028C-A RGA1P39083 1007 aa7.12□□□□□ -1.27
RIM1YCR028C-A MAM3Q12296 706 aa7.12□□□□□ -1.27
RIM1YCR028C-A SLI15P38283 698 aa7.11□□□□□ -1.27
RIM1YCR028C-A LEU3P08638 886 aa7.07□□□□□ -1.28
RIM1YCR028C-A HAP5Q02516 242 aa7.07□□□□□ -1.28
RIM1YCR028C-A IES2P40154 320 aa7.06□□□□□ -1.28
RIM1YCR028C-A CDC73Q06697 393 aa7.04□□□□□ -1.28
RIM1YCR028C-A DIT2P21595 489 aa7.03□□□□□ -1.28
RIM1YCR028C-A NUP42P49686 430 aaKnown RBP7.03□□□□□ -1.28
RIM1YCR028C-A RAS1P01119 309 aa7.02□□□□□ -1.29
RIM1YCR028C-A PTC2P39966 464 aaKnown RBP7.02□□□□□ -1.29
RIM1YCR028C-A RPP1BP10622 106 aaKnown RBP7.01□□□□□ -1.29
RIM1YCR028C-A MPC54Q08550 464 aa7.01□□□□□ -1.29
RIM1YCR028C-A BNI4P53858 892 aa7□□□□□ -1.29
RIM1YCR028C-A DPL1Q05567 589 aa7□□□□□ -1.29
RIM1YCR028C-A ORC6P38826 435 aa6.98□□□□□ -1.29
RIM1YCR028C-A NMA111P53920 997 aa6.98□□□□□ -1.29
RIM1YCR028C-A YML082WQ04533 649 aaKnown RBP6.98□□□□□ -1.29
RIM1YCR028C-A YNR021WP53723 404 aaKnown RBP6.97□□□□□ -1.29
RIM1YCR028C-A RPN1P38764 993 aaKnown RBP6.96□□□□□ -1.3
RIM1YCR028C-A CSC1Q06538 782 aa6.96□□□□□ -1.3
RIM1YCR028C-A ISU2Q12056 156 aa6.96□□□□□ -1.3
RIM1YCR028C-A PSE1P32337 1089 aaKnown RBP6.95□□□□□ -1.3
RIM1YCR028C-A PEX21P50091 288 aa6.95□□□□□ -1.3
RIM1YCR028C-A GAP1P19145 602 aaPredicted RBP6.94□□□□□ -1.3
RIM1YCR028C-A RGR1P19263 1082 aa6.94□□□□□ -1.3
RIM1YCR028C-A MVP1P40959 511 aaKnown RBP6.94□□□□□ -1.3
RIM1YCR028C-A LEO1P38439 464 aa6.93□□□□□ -1.3
RIM1YCR028C-A ATF2P53296 535 aa6.93□□□□□ -1.3
RIM1YCR028C-A GLC3P32775 704 aa6.92□□□□□ -1.3
RIM1YCR028C-A YPR109WQ06104 294 aa6.91□□□□□ -1.3
RIM1YCR028C-A TFB4Q12004 338 aa6.91□□□□□ -1.3
RIM1YCR028C-A YPR015CQ12531 247 aa6.91□□□□□ -1.3
RIM1YCR028C-A TUM1Q08686 304 aaKnown RBP6.9□□□□□ -1.3
RIM1YCR028C-A YRR1Q12172 810 aa6.9□□□□□ -1.3
RIM1YCR028C-A TEA1P47988 759 aa6.87□□□□□ -1.31
RIM1YCR028C-A AIM7Q12156 149 aa6.85□□□□□ -1.31
RIM1YCR028C-A PDR1P12383 1068 aa6.84□□□□□ -1.31
RIM1YCR028C-A KIN1P13185 1064 aa6.83□□□□□ -1.32
RIM1YCR028C-A TRK1P12685 1235 aa6.82□□□□□ -1.32
RIM1YCR028C-A CLB5P30283 435 aa6.82□□□□□ -1.32
RIM1YCR028C-A GYP1Q08484 637 aa6.8□□□□□ -1.32
RIM1YCR028C-A RAM1P22007 431 aa6.79□□□□□ -1.32
RIM1YCR028C-A AMS1P22855 1083 aa6.79□□□□□ -1.32
RIM1YCR028C-A NUD1P32336 851 aa6.78□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms