RNA–Protein interactions for RNA: YCL005W-A

VMA9, Transcript of Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex, yeast

Gene VMA9, Length 222 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA9	YCL005W-A	REF2	P42073	533 aa	Predicted RBP	4.24	□□□□□ -1.73
VMA9	YCL005W-A	YLR326W	Q06170	240 aa	Known RBP	4.24	□□□□□ -1.73
VMA9	YCL005W-A	TRP5	P00931	707 aa	Known RBP	4.23	□□□□□ -1.73
VMA9	YCL005W-A	YDR090C	Q03193	310 aa		4.23	□□□□□ -1.73
VMA9	YCL005W-A	SPP1	Q03012	353 aa		4.22	□□□□□ -1.73
VMA9	YCL005W-A	MSB4	Q12317	492 aa		4.22	□□□□□ -1.73
VMA9	YCL005W-A	HTA1	P04911	132 aa	Known RBP	4.21	□□□□□ -1.74
VMA9	YCL005W-A	HTA2	P04912	132 aa		4.21	□□□□□ -1.74
VMA9	YCL005W-A	KEX1	P09620	729 aa		4.21	□□□□□ -1.74
VMA9	YCL005W-A	BUD31	P25337	157 aa	Predicted RBP	4.21	□□□□□ -1.74
VMA9	YCL005W-A	DSF2	P38213	736 aa		4.21	□□□□□ -1.74
VMA9	YCL005W-A	TIF11	P38912	153 aa	Known RBP	4.21	□□□□□ -1.74
VMA9	YCL005W-A	ULI1	P43604	169 aa		4.21	□□□□□ -1.74
VMA9	YCL005W-A	UBP9	P39967	754 aa		4.2	□□□□□ -1.74
VMA9	YCL005W-A	IES2	P40154	320 aa		4.2	□□□□□ -1.74
VMA9	YCL005W-A	IOC2	Q12072	812 aa		4.2	□□□□□ -1.74
VMA9	YCL005W-A	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
VMA9	YCL005W-A	YEL023C	P39992	682 aa		4.19	□□□□□ -1.74
VMA9	YCL005W-A	DIT2	P21595	489 aa		4.18	□□□□□ -1.74
VMA9	YCL005W-A	NUP42	P49686	430 aa	Known RBP	4.18	□□□□□ -1.74
VMA9	YCL005W-A	MAM3	Q12296	706 aa		4.18	□□□□□ -1.74
VMA9	YCL005W-A	COX6	P00427	148 aa		4.17	□□□□□ -1.74
VMA9	YCL005W-A	MPH3	P0CE00	602 aa		4.17	□□□□□ -1.74
VMA9	YCL005W-A	ABP1	P15891	592 aa	Known RBP	4.17	□□□□□ -1.74
VMA9	YCL005W-A	RAD54	P32863	898 aa		4.16	□□□□□ -1.74
VMA9	YCL005W-A	EAP1	P36041	632 aa	Known RBP	4.16	□□□□□ -1.74
VMA9	YCL005W-A	DAN4	P47179	1161 aa		4.16	□□□□□ -1.74
VMA9	YCL005W-A	LDB19	Q12502	818 aa		4.16	□□□□□ -1.74
VMA9	YCL005W-A	AI4	P03878	556 aa		4.15	□□□□□ -1.75
VMA9	YCL005W-A	GLC3	P32775	704 aa		4.15	□□□□□ -1.75
VMA9	YCL005W-A	SLI15	P38283	698 aa		4.15	□□□□□ -1.75
VMA9	YCL005W-A	RTG1	P32607	177 aa		4.14	□□□□□ -1.75
VMA9	YCL005W-A	LEO1	P38439	464 aa		4.14	□□□□□ -1.75
VMA9	YCL005W-A	PTC4	P38089	393 aa		4.13	□□□□□ -1.75
VMA9	YCL005W-A	MID1	P41821	548 aa		4.13	□□□□□ -1.75
VMA9	YCL005W-A	KIC1	P38692	1080 aa		4.12	□□□□□ -1.75
VMA9	YCL005W-A	RPN1	P38764	993 aa	Known RBP	4.12	□□□□□ -1.75
VMA9	YCL005W-A	ORC6	P38826	435 aa		4.12	□□□□□ -1.75
VMA9	YCL005W-A	YNL035C	P53962	389 aa	Known RBP	4.12	□□□□□ -1.75
VMA9	YCL005W-A	YDR344C	Q05510	147 aa		4.12	□□□□□ -1.75
VMA9	YCL005W-A	CDC73	Q06697	393 aa		4.12	□□□□□ -1.75
VMA9	YCL005W-A	MAK21	Q12176	1025 aa	Known RBP	4.12	□□□□□ -1.75
VMA9	YCL005W-A	YNR021W	P53723	404 aa	Known RBP	4.11	□□□□□ -1.75
VMA9	YCL005W-A	JIP4	Q03361	876 aa		4.11	□□□□□ -1.75
VMA9	YCL005W-A	PML39	Q03760	334 aa		4.11	□□□□□ -1.75
VMA9	YCL005W-A	FKH1	P40466	484 aa		4.1	□□□□□ -1.75
VMA9	YCL005W-A	AIR2	Q12476	344 aa	Known RBP	4.08	□□□□□ -1.76
VMA9	YCL005W-A	KIN1	P13185	1064 aa		4.07	□□□□□ -1.76
VMA9	YCL005W-A	GAP1	P19145	602 aa	Predicted RBP	4.07	□□□□□ -1.76
VMA9	YCL005W-A	MPC54	Q08550	464 aa		4.07	□□□□□ -1.76
VMA9	YCL005W-A	SEC61	P32915	480 aa		4.06	□□□□□ -1.76
VMA9	YCL005W-A	PEX29	Q03370	554 aa		4.06	□□□□□ -1.76
VMA9	YCL005W-A	NCR1	Q12200	1170 aa		4.06	□□□□□ -1.76
VMA9	YCL005W-A	RGR1	P19263	1082 aa		4.05	□□□□□ -1.76
VMA9	YCL005W-A	SIS1	P25294	352 aa	Known RBP	4.05	□□□□□ -1.76
VMA9	YCL005W-A	PSE1	P32337	1089 aa	Known RBP	4.05	□□□□□ -1.76
VMA9	YCL005W-A	MVP1	P40959	511 aa	Known RBP	4.04	□□□□□ -1.76
VMA9	YCL005W-A	DPL1	Q05567	589 aa		4.04	□□□□□ -1.76
VMA9	YCL005W-A	YDL129W	Q07555	291 aa		4.04	□□□□□ -1.76
VMA9	YCL005W-A	SAP30	P38429	201 aa		4.03	□□□□□ -1.76
VMA9	YCL005W-A	ATF2	P53296	535 aa		4.03	□□□□□ -1.76
VMA9	YCL005W-A	DMA2	P53924	522 aa		4.03	□□□□□ -1.76
VMA9	YCL005W-A	YPR109W	Q06104	294 aa		4.03	□□□□□ -1.76
VMA9	YCL005W-A	AIM7	Q12156	149 aa		4.03	□□□□□ -1.76
VMA9	YCL005W-A	PDR1	P12383	1068 aa		4.02	□□□□□ -1.77
VMA9	YCL005W-A	NMA111	P53920	997 aa		4.02	□□□□□ -1.77
VMA9	YCL005W-A	GUA1	P38625	525 aa	Known RBP	4.01	□□□□□ -1.77
VMA9	YCL005W-A	CSC1	Q06538	782 aa		4.01	□□□□□ -1.77
VMA9	YCL005W-A	YRR1	Q12172	810 aa		4.01	□□□□□ -1.77
VMA9	YCL005W-A	TFG1	P41895	735 aa	Predicted RBP	4	□□□□□ -1.77
VMA9	YCL005W-A	TUM1	Q08686	304 aa	Known RBP	4	□□□□□ -1.77
VMA9	YCL005W-A	TYW1	Q08960	810 aa	Known RBP	4	□□□□□ -1.77
VMA9	YCL005W-A	SCJ1	P25303	377 aa		3.99	□□□□□ -1.77
VMA9	YCL005W-A	KTR1	P27810	393 aa	Known RBP	3.99	□□□□□ -1.77
VMA9	YCL005W-A	TEA1	P47988	759 aa		3.99	□□□□□ -1.77
VMA9	YCL005W-A	NIS1	P53939	407 aa		3.99	□□□□□ -1.77
VMA9	YCL005W-A	PEX21	P50091	288 aa		3.98	□□□□□ -1.77
VMA9	YCL005W-A	ERF2	Q06551	359 aa		3.98	□□□□□ -1.77
VMA9	YCL005W-A	TFB4	Q12004	338 aa		3.98	□□□□□ -1.77
VMA9	YCL005W-A	ISU2	Q12056	156 aa		3.98	□□□□□ -1.77
VMA9	YCL005W-A	HAP5	Q02516	242 aa		3.97	□□□□□ -1.77
VMA9	YCL005W-A	YPR015C	Q12531	247 aa		3.97	□□□□□ -1.77
VMA9	YCL005W-A	RPP1B	P10622	106 aa	Known RBP	3.96	□□□□□ -1.78
VMA9	YCL005W-A	ARH1	P48360	493 aa		3.96	□□□□□ -1.78
VMA9	YCL005W-A	FPK1	P53739	893 aa		3.96	□□□□□ -1.78
VMA9	YCL005W-A	ELP4	Q02884	456 aa	Known RBP	3.96	□□□□□ -1.78
VMA9	YCL005W-A	BMT6	Q12291	365 aa		3.96	□□□□□ -1.78
VMA9	YCL005W-A	KEX2	P13134	814 aa		3.95	□□□□□ -1.78
VMA9	YCL005W-A	RAM1	P22007	431 aa		3.95	□□□□□ -1.78
VMA9	YCL005W-A	NUD1	P32336	851 aa		3.95	□□□□□ -1.78
VMA9	YCL005W-A	STR2	P47164	639 aa		3.95	□□□□□ -1.78
VMA9	YCL005W-A	ESS1	P22696	170 aa		3.94	□□□□□ -1.78
VMA9	YCL005W-A	PKC1	P24583	1151 aa		3.94	□□□□□ -1.78
VMA9	YCL005W-A	CSN12	P47130	423 aa		3.94	□□□□□ -1.78
VMA9	YCL005W-A	ISM1	P48526	1002 aa		3.94	□□□□□ -1.78
VMA9	YCL005W-A	TFB3	Q03290	321 aa		3.94	□□□□□ -1.78
VMA9	YCL005W-A	SIT4	P20604	311 aa		3.93	□□□□□ -1.78
VMA9	YCL005W-A	YJU3	P28321	313 aa		3.93	□□□□□ -1.78
VMA9	YCL005W-A	CLB5	P30283	435 aa		3.93	□□□□□ -1.78
VMA9	YCL005W-A	YJL171C	P46992	396 aa		3.93	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms