RNA–Protein interactions for RNA: YBR028C

YPK3, Transcript of AGC kinase, yeastyeast

Gene YPK3, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPK3YBR028C YOL036WQ08206 761 aa8.9□□□□□ -0.99
YPK3YBR028C NUP42P49686 430 aaKnown RBP8.89□□□□□ -0.99
YPK3YBR028C YGR273CP53329 174 aa8.89□□□□□ -0.99
YPK3YBR028C YDR090CQ03193 310 aa8.89□□□□□ -0.99
YPK3YBR028C YNR021WP53723 404 aaKnown RBP8.88□□□□□ -0.99
YPK3YBR028C YLR326WQ06170 240 aaKnown RBP8.87□□□□□ -0.99
YPK3YBR028C DIT2P21595 489 aa8.86□□□□□ -0.99
YPK3YBR028C SET4P42948 560 aa8.86□□□□□ -0.99
YPK3YBR028C NST1P53935 1240 aa8.85□□□□□ -0.99
YPK3YBR028C DCW1P36091 449 aa8.84□□□□□ -0.99
YPK3YBR028C GLC3P32775 704 aa8.83□□□□□ -1
YPK3YBR028C ABP1P15891 592 aaKnown RBP8.82□□□□□ -1
YPK3YBR028C KEX1P09620 729 aa8.81□□□□□ -1
YPK3YBR028C MSB4Q12317 492 aa8.8□□□□□ -1
YPK3YBR028C KIN1P13185 1064 aa8.79□□□□□ -1
YPK3YBR028C WSC3Q12215 556 aa8.79□□□□□ -1
YPK3YBR028C DMA2P53924 522 aa8.78□□□□□ -1
YPK3YBR028C HTA1P04911 132 aaKnown RBP8.78□□□□□ -1
YPK3YBR028C HTA2P04912 132 aa8.78□□□□□ -1
YPK3YBR028C PCS60P38137 543 aaKnown RBP RIP-Chip data8.78□□□□□ -1 RIP-Chip
YPK3YBR028C AIM7Q12156 149 aa8.78□□□□□ -1
YPK3YBR028C RAD54P32863 898 aa8.76□□□□□ -1.01
YPK3YBR028C ILV3P39522 585 aaKnown RBP8.76□□□□□ -1.01
YPK3YBR028C YBL029C-AQ3E756 94 aa8.74□□□□□ -1.01
YPK3YBR028C KIC1P38692 1080 aa8.73□□□□□ -1.01
YPK3YBR028C MPH3P0CE00 602 aa8.73□□□□□ -1.01
YPK3YBR028C AI4P03878 556 aa8.71□□□□□ -1.02
YPK3YBR028C YEL023CP39992 682 aa8.7□□□□□ -1.02
YPK3YBR028C VNX1P42839 908 aa8.7□□□□□ -1.02
YPK3YBR028C TRP5P00931 707 aaKnown RBP8.69□□□□□ -1.02
YPK3YBR028C EAP1P36041 632 aaKnown RBP8.68□□□□□ -1.02
YPK3YBR028C ORC6P38826 435 aa8.68□□□□□ -1.02
YPK3YBR028C ATF2P53296 535 aa8.68□□□□□ -1.02
YPK3YBR028C PSE1P32337 1089 aaKnown RBP8.65□□□□□ -1.02
YPK3YBR028C DAN4P47179 1161 aa8.65□□□□□ -1.02
YPK3YBR028C TIF11P38912 153 aaKnown RBP8.64□□□□□ -1.03
YPK3YBR028C PTC4P38089 393 aa8.63□□□□□ -1.03
YPK3YBR028C SLI15P38283 698 aa8.63□□□□□ -1.03
YPK3YBR028C GUA1P38625 525 aaKnown RBP8.62□□□□□ -1.03
YPK3YBR028C ULI1P43604 169 aa8.62□□□□□ -1.03
YPK3YBR028C SPP1Q03012 353 aa8.61□□□□□ -1.03
YPK3YBR028C UBP9P39967 754 aa8.6□□□□□ -1.03
YPK3YBR028C IOC2Q12072 812 aa8.6□□□□□ -1.03
YPK3YBR028C JIP4Q03361 876 aa8.59□□□□□ -1.03
YPK3YBR028C GAP1P19145 602 aaPredicted RBP8.57□□□□□ -1.04
YPK3YBR028C RGR1P19263 1082 aa8.57□□□□□ -1.04
YPK3YBR028C MVP1P40959 511 aaKnown RBP8.55□□□□□ -1.04
YPK3YBR028C CDC73Q06697 393 aa8.54□□□□□ -1.04
YPK3YBR028C YNL035CP53962 389 aaKnown RBP8.52□□□□□ -1.04
YPK3YBR028C TEA1P47988 759 aa8.52□□□□□ -1.05
YPK3YBR028C MID1P41821 548 aa8.51□□□□□ -1.05
YPK3YBR028C HPC2Q01448 625 aa8.51□□□□□ -1.05
YPK3YBR028C CSC1Q06538 782 aa8.51□□□□□ -1.05
YPK3YBR028C LDB19Q12502 818 aa8.5□□□□□ -1.05
YPK3YBR028C PML39Q03760 334 aa8.49□□□□□ -1.05
YPK3YBR028C RPP1BP10622 106 aaKnown RBP8.48□□□□□ -1.05
YPK3YBR028C RTG1P32607 177 aa8.48□□□□□ -1.05
YPK3YBR028C CLB5P30283 435 aa8.47□□□□□ -1.05
YPK3YBR028C CSN12P47130 423 aa8.47□□□□□ -1.05
YPK3YBR028C KTR1P27810 393 aaKnown RBP8.46□□□□□ -1.06
YPK3YBR028C TFB3Q03290 321 aa8.46□□□□□ -1.06
YPK3YBR028C YPR109WQ06104 294 aa8.46□□□□□ -1.06
YPK3YBR028C MPC54Q08550 464 aa8.46□□□□□ -1.06
YPK3YBR028C TFB4Q12004 338 aa8.46□□□□□ -1.06
YPK3YBR028C SEC61P32915 480 aa8.44□□□□□ -1.06
YPK3YBR028C NIS1P53939 407 aa8.44□□□□□ -1.06
YPK3YBR028C DPL1Q05567 589 aa8.44□□□□□ -1.06
YPK3YBR028C HGH1P48362 394 aaKnown RBP8.44□□□□□ -1.06
YPK3YBR028C RLF2Q12495 606 aa8.44□□□□□ -1.06
YPK3YBR028C SSA2P10592 639 aaKnown RBP8.42□□□□□ -1.06
YPK3YBR028C TYW1Q08960 810 aaKnown RBP8.42□□□□□ -1.06
YPK3YBR028C TUM1Q08686 304 aaKnown RBP8.41□□□□□ -1.06
YPK3YBR028C BUD31P25337 157 aaPredicted RBP8.4□□□□□ -1.06
YPK3YBR028C PEX21P50091 288 aa8.4□□□□□ -1.06
YPK3YBR028C FPK1P53739 893 aa8.4□□□□□ -1.06
YPK3YBR028C PKC1P24583 1151 aa8.39□□□□□ -1.07
YPK3YBR028C PEX29Q03370 554 aa8.39□□□□□ -1.07
YPK3YBR028C BRL1P38770 471 aa8.38□□□□□ -1.07
YPK3YBR028C NCR1Q12200 1170 aa8.38□□□□□ -1.07
YPK3YBR028C HST2P53686 357 aa8.37□□□□□ -1.07
YPK3YBR028C YDL129WQ07555 291 aa8.36□□□□□ -1.07
YPK3YBR028C ISU2Q12056 156 aa8.36□□□□□ -1.07
YPK3YBR028C YRR1Q12172 810 aa8.36□□□□□ -1.07
YPK3YBR028C SIT4P20604 311 aa8.35□□□□□ -1.07
YPK3YBR028C NMA111P53920 997 aa8.35□□□□□ -1.07
YPK3YBR028C YMR196WQ04336 1088 aa8.35□□□□□ -1.07
YPK3YBR028C SCJ1P25303 377 aa8.35□□□□□ -1.07
YPK3YBR028C GLN1P32288 370 aaKnown RBP8.35□□□□□ -1.07
YPK3YBR028C FKH1P40466 484 aa8.35□□□□□ -1.07
YPK3YBR028C TFG1P41895 735 aaPredicted RBP8.33□□□□□ -1.08
YPK3YBR028C ESS1P22696 170 aa8.32□□□□□ -1.08
YPK3YBR028C MMP1Q12372 583 aa8.32□□□□□ -1.08
YPK3YBR028C YDR344CQ05510 147 aa8.31□□□□□ -1.08
YPK3YBR028C PKH3Q03306 898 aaPredicted RBP8.29□□□□□ -1.08
YPK3YBR028C PDR1P12383 1068 aa8.28□□□□□ -1.08
YPK3YBR028C YJU3P28321 313 aa8.28□□□□□ -1.08
YPK3YBR028C SAP30P38429 201 aa8.28□□□□□ -1.08
YPK3YBR028C AIR2Q12476 344 aaKnown RBP8.27□□□□□ -1.09
YPK3YBR028C NUD1P32336 851 aa8.27□□□□□ -1.09
YPK3YBR028C ARH1P48360 493 aa8.27□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms