RNA–Protein interactions for RNA: YBR028C

YPK3, Transcript of AGC kinase, yeastyeast

Gene YPK3, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPK3YBR028C DRS1P32892 752 aaKnown RBP14.81□□□□□ -0.04
YPK3YBR028C MTC1P47018 478 aaKnown RBP14.55□□□□□ -0.08
YPK3YBR028C BFR2Q06631 534 aaKnown RBP12.89□□□□□ -0.35
YPK3YBR028C DIP2Q12220 943 aaPredicted RBP12.54□□□□□ -0.4
YPK3YBR028C AVT3P36062 692 aa12.46□□□□□ -0.42
YPK3YBR028C TFA1P36100 482 aa12.29□□□□□ -0.44
YPK3YBR028C RSE1Q04693 1361 aaKnown RBP11.76□□□□□ -0.53
YPK3YBR028C ISW2Q08773 1120 aa11.75□□□□□ -0.53
YPK3YBR028C FAP1P53971 965 aa11.66□□□□□ -0.54
YPK3YBR028C RPG1P38249 964 aaKnown RBP11.62□□□□□ -0.55
YPK3YBR028C PRI1P10363 409 aa11.57□□□□□ -0.56
YPK3YBR028C RPL17AP05740 184 aaKnown RBP11.32□□□□□ -0.6
YPK3YBR028C RPL17BP46990 184 aaKnown RBP11.32□□□□□ -0.6
YPK3YBR028C AAD16Q02895 342 aa11.32□□□□□ -0.6
YPK3YBR028C REB1P21538 810 aa11.12□□□□□ -0.63
YPK3YBR028C TSR3Q12094 313 aaKnown RBP11.01□□□□□ -0.65
YPK3YBR028C SPT21P35209 758 aa10.97□□□□□ -0.65
YPK3YBR028C PRY3P47033 881 aa10.92□□□□□ -0.66
YPK3YBR028C RIM101P33400 625 aa10.83□□□□□ -0.68
YPK3YBR028C PTP3P40048 928 aa10.58□□□□□ -0.72
YPK3YBR028C YKR023WP36119 530 aaKnown RBP10.56□□□□□ -0.72
YPK3YBR028C OXP1P28273 1286 aa10.54□□□□□ -0.72
YPK3YBR028C MRPL32P25348 183 aa10.52□□□□□ -0.73
YPK3YBR028C RQC2Q12532 1038 aaKnown RBP10.5□□□□□ -0.73
YPK3YBR028C YCK3P39962 524 aa10.45□□□□□ -0.74
YPK3YBR028C SSP1P38871 571 aa10.43□□□□□ -0.74
YPK3YBR028C YAH1Q12184 172 aaKnown RBP10.36□□□□□ -0.75
YPK3YBR028C HOP09932 586 aa10.33□□□□□ -0.76
YPK3YBR028C TFC8Q12308 588 aa10.33□□□□□ -0.76
YPK3YBR028C CDC27P38042 758 aa10.3□□□□□ -0.76
YPK3YBR028C YIL055CP40523 627 aaKnown RBP10.3□□□□□ -0.76
YPK3YBR028C HAA1Q12753 694 aaKnown RBP10.3□□□□□ -0.76
YPK3YBR028C DCD1P06773 312 aa10.26□□□□□ -0.77
YPK3YBR028C YLR271WQ06152 274 aa10.26□□□□□ -0.77
YPK3YBR028C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.2□□□□□ -0.78 RIP-Chip
YPK3YBR028C DMA1P38823 416 aa10.19□□□□□ -0.78
YPK3YBR028C RSM7P47150 247 aa10.18□□□□□ -0.78
YPK3YBR028C BCH2P36122 765 aa10.05□□□□□ -0.8
YPK3YBR028C MGA2P40578 1113 aa10.03□□□□□ -0.8
YPK3YBR028C AI2P03876 854 aa9.99□□□□□ -0.81
YPK3YBR028C PSD2P53037 1138 aaKnown RBP9.98□□□□□ -0.81
YPK3YBR028C CST9Q06032 482 aa9.97□□□□□ -0.81
YPK3YBR028C EPS1P40557 701 aa9.88□□□□□ -0.83
YPK3YBR028C BBC1P47068 1157 aa9.88□□□□□ -0.83
YPK3YBR028C SCY1P53009 804 aa9.82□□□□□ -0.84
YPK3YBR028C MAP2P38174 421 aaKnown RBP9.81□□□□□ -0.84
YPK3YBR028C BDF1P35817 686 aa9.8□□□□□ -0.84
YPK3YBR028C UBP10P53874 792 aaPredicted RBP9.79□□□□□ -0.84
YPK3YBR028C YGL015CP33199 130 aa9.74□□□□□ -0.85
YPK3YBR028C MRM1P25270 412 aa9.7□□□□□ -0.86
YPK3YBR028C RCR1P38212 213 aa9.64□□□□□ -0.87
YPK3YBR028C RAM2P29703 316 aa9.63□□□□□ -0.87
YPK3YBR028C SAS10Q12136 610 aaPredicted RBP9.6□□□□□ -0.87
YPK3YBR028C SLX5P32828 619 aaKnown RBP9.59□□□□□ -0.87
YPK3YBR028C RTG3P38165 486 aa9.56□□□□□ -0.88
YPK3YBR028C VPS29P38759 282 aa9.48□□□□□ -0.89
YPK3YBR028C SET1P38827 1080 aaKnown RBP9.44□□□□□ -0.9
YPK3YBR028C MAK11P20484 414 aaKnown RBP9.43□□□□□ -0.9
YPK3YBR028C YMR1P47147 688 aaKnown RBP RIP-Chip data9.36□□□□□ -0.91not detected
YPK3YBR028C STS1P38637 319 aa9.35□□□□□ -0.91
YPK3YBR028C TIF4632P39936 914 aaKnown RBP9.34□□□□□ -0.91
YPK3YBR028C YPR148CQ06523 435 aa9.34□□□□□ -0.91
YPK3YBR028C LEU3P08638 886 aa9.33□□□□□ -0.92
YPK3YBR028C COQ8P27697 501 aa9.31□□□□□ -0.92
YPK3YBR028C DBP1P24784 617 aaKnown RBP9.3□□□□□ -0.92
YPK3YBR028C LEO1P38439 464 aa9.29□□□□□ -0.92
YPK3YBR028C TGL3P40308 642 aa9.29□□□□□ -0.92
YPK3YBR028C YFR006WP43590 535 aa9.29□□□□□ -0.92
YPK3YBR028C NSR1P27476 414 aaKnown RBP RIP-Chip data9.29□□□□□ -0.92not detected
YPK3YBR028C VPS70P47161 811 aa9.29□□□□□ -0.92
YPK3YBR028C YOR238WQ08634 303 aa9.29□□□□□ -0.92
YPK3YBR028C IFH1P39520 1085 aa9.26□□□□□ -0.93
YPK3YBR028C EDS1P38073 919 aa9.24□□□□□ -0.93
YPK3YBR028C MIF2P35201 549 aa9.23□□□□□ -0.93
YPK3YBR028C YAP5P40574 245 aa9.22□□□□□ -0.93
YPK3YBR028C CKB1P43639 278 aa9.2□□□□□ -0.94
YPK3YBR028C PIB1Q06651 286 aa9.2□□□□□ -0.94
YPK3YBR028C NOP53Q12080 455 aaKnown RBP9.19□□□□□ -0.94
YPK3YBR028C SPB4P25808 606 aaPredicted RBP9.14□□□□□ -0.95
YPK3YBR028C PTC3P34221 468 aaKnown RBP9.13□□□□□ -0.95
YPK3YBR028C VMA1P17255 1071 aaKnown RBP9.12□□□□□ -0.95
YPK3YBR028C MST1P07236 462 aa9.07□□□□□ -0.96
YPK3YBR028C PBS2P08018 668 aa9.07□□□□□ -0.96
YPK3YBR028C DSF2P38213 736 aa9.07□□□□□ -0.96
YPK3YBR028C RPN1P38764 993 aaKnown RBP9.03□□□□□ -0.96
YPK3YBR028C REF2P42073 533 aaPredicted RBP9.03□□□□□ -0.96
YPK3YBR028C TAF7Q05021 590 aa9.02□□□□□ -0.97
YPK3YBR028C SAM3Q08986 587 aa9.02□□□□□ -0.97
YPK3YBR028C GRE2Q12068 342 aaKnown RBP8.98□□□□□ -0.97
YPK3YBR028C ATH1P48016 1211 aa8.97□□□□□ -0.97
YPK3YBR028C GUT1P32190 709 aa8.95□□□□□ -0.98
YPK3YBR028C GTT3P39996 337 aa8.95□□□□□ -0.98
YPK3YBR028C MAM3Q12296 706 aa8.94□□□□□ -0.98
YPK3YBR028C GYP5Q12344 894 aa8.93□□□□□ -0.98
YPK3YBR028C IES2P40154 320 aa8.91□□□□□ -0.98
YPK3YBR028C UBP14P38237 781 aaKnown RBP8.9□□□□□ -0.98
YPK3YBR028C VHR2P40041 505 aa8.9□□□□□ -0.98
YPK3YBR028C MAK21Q12176 1025 aaKnown RBP8.9□□□□□ -0.98
YPK3YBR028C COX6P00427 148 aa8.9□□□□□ -0.99
YPK3YBR028C SOL3P38858 249 aa8.9□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms