RNA–Protein interactions for RNA: ENST00000641625.1

CASC19-246, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,606 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-246ENST00000641625 RIMBP3BA6NNM3 1639 aa10.91□□□□□ -0.66
CASC19-246ENST00000641625 RIMBP3Q9UFD9 1639 aa10.91□□□□□ -0.66
CASC19-246ENST00000641625 IGF1RP08069 1367 aa10.9□□□□□ -0.66
CASC19-246ENST00000641625 NUP160Q12769 1436 aa10.89□□□□□ -0.67
CASC19-246ENST00000641625 CEP170Q5SW79 1584 aa10.87□□□□□ -0.67
CASC19-246ENST00000641625 CYB5RLQ6IPT4 315 aa10.85□□□□□ -0.67
CASC19-246ENST00000641625 ARAP1Q96P48 1450 aa10.84□□□□□ -0.67
CASC19-246ENST00000641625 CUL7Q14999 1698 aa10.83□□□□□ -0.68
CASC19-246ENST00000641625 CARMIL1Q5VZK9 1371 aa10.83□□□□□ -0.68
CASC19-246ENST00000641625 RUSC2Q8N2Y8 1516 aa10.82□□□□□ -0.68
CASC19-246ENST00000641625 JPH4Q96JJ6 628 aa10.78□□□□□ -0.68
CASC19-246ENST00000641625 SHROOM2Q13796 1616 aa10.78□□□□□ -0.68
CASC19-246ENST00000641625 ERCC6L2Q5T890 1561 aa10.77□□□□□ -0.68
CASC19-246ENST00000641625 KIAA0586Q9BVV6 1533 aa10.77□□□□□ -0.69
CASC19-246ENST00000641625 PRG4Q92954 1404 aaPredicted RBP10.77□□□□□ -0.69
CASC19-246ENST00000641625 RAPGEF2Q9Y4G8 1499 aa10.75□□□□□ -0.69
CASC19-246ENST00000641625 PRXQ9BXM0 1461 aa10.72□□□□□ -0.69
CASC19-246ENST00000641625 IQGAP2Q13576 1575 aa10.7□□□□□ -0.7
CASC19-246ENST00000641625 CSRNP3Q8WYN3 585 aa10.69□□□□□ -0.7
CASC19-246ENST00000641625 EEA1Q15075 1411 aa10.69□□□□□ -0.7
CASC19-246ENST00000641625 SLC24A1O60721 1099 aa10.69□□□□□ -0.7
CASC19-246ENST00000641625 FAM9AQ8IZU1 332 aaPredicted RBP10.67□□□□□ -0.7
CASC19-246ENST00000641625 CARMIL2Q6F5E8 1435 aa10.66□□□□□ -0.7
CASC19-246ENST00000641625 MAPK8IP2Q13387 824 aaPredicted RBP10.66□□□□□ -0.7
CASC19-246ENST00000641625 DMRT2Q9Y5R5 561 aa10.65□□□□□ -0.7
CASC19-246ENST00000641625 UGGT2Q9NYU1 1516 aa10.64□□□□□ -0.71
CASC19-246ENST00000641625 TRHP20396 242 aaPredicted RBP10.64□□□□□ -0.71
CASC19-246ENST00000641625 DISP1Q96F81 1524 aa10.63□□□□□ -0.71
CASC19-246ENST00000641625 CACNB1Q02641 598 aaPredicted RBP10.63□□□□□ -0.71
CASC19-246ENST00000641625 TNIKQ9UKE5 1360 aa10.63□□□□□ -0.71
CASC19-246ENST00000641625 PTPRGP23470 1445 aa10.63□□□□□ -0.71
CASC19-246ENST00000641625 TTBK1Q5TCY1 1321 aaPredicted RBP10.62□□□□□ -0.71
CASC19-246ENST00000641625 KCNA4P22459 653 aa10.61□□□□□ -0.71
CASC19-246ENST00000641625 CTTNBP2Q8WZ74 1663 aa10.61□□□□□ -0.71
CASC19-246ENST00000641625 KIAA0556O60303 1618 aa10.59□□□□□ -0.71
CASC19-246ENST00000641625 ADCY10Q96PN6 1610 aa10.58□□□□□ -0.72
CASC19-246ENST00000641625 GOLGA3Q08378 1498 aa10.58□□□□□ -0.72
CASC19-246ENST00000641625 NPM1P06748 294 aaKnown RBP eCLIP10.57□□□□□ -0.72
CASC19-246ENST00000641625 KIF21BO75037 1637 aa10.56□□□□□ -0.72
CASC19-246ENST00000641625 UACAQ9BZF9 1416 aa10.55□□□□□ -0.72
CASC19-246ENST00000641625 ABCC2Q92887 1545 aa10.54□□□□□ -0.72
CASC19-246ENST00000641625 UHRF1BP1LA0JNW5 1464 aa10.54□□□□□ -0.72
CASC19-246ENST00000641625 MAPKBP1O60336 1514 aa10.54□□□□□ -0.72
CASC19-246ENST00000641625 RANGAP1P46060 587 aaPredicted RBP10.52□□□□□ -0.73
CASC19-246ENST00000641625 P3H3Q8IVL6 736 aa10.52□□□□□ -0.73
CASC19-246ENST00000641625 UBTFP17480 764 aaKnown RBP10.51□□□□□ -0.73
CASC19-246ENST00000641625 PLB1Q6P1J6 1458 aa10.51□□□□□ -0.73
CASC19-246ENST00000641625 SAMD9Q5K651 1589 aa10.5□□□□□ -0.73
CASC19-246ENST00000641625 ABCC10Q5T3U5 1492 aa10.5□□□□□ -0.73
CASC19-246ENST00000641625 FAM69CQ0P6D2 419 aa10.49□□□□□ -0.73
CASC19-246ENST00000641625 KDM5BQ9UGL1 1544 aa10.49□□□□□ -0.73
CASC19-246ENST00000641625 ASXL2Q76L83 1435 aa10.48□□□□□ -0.73
CASC19-246ENST00000641625 ABCA8O94911 1581 aa10.48□□□□□ -0.73
CASC19-246ENST00000641625 DIP2BQ9P265 1576 aa10.47□□□□□ -0.73
CASC19-246ENST00000641625 FHOD3Q2V2M9 1422 aa10.47□□□□□ -0.73
CASC19-246ENST00000641625 EFCAB5A4FU69 1503 aa10.46□□□□□ -0.74
CASC19-246ENST00000641625 KIF13AQ9H1H9 1805 aa10.45□□□□□ -0.74
CASC19-246ENST00000641625 ZCCHC11Q5TAX3 1644 aaKnown RBP10.45□□□□□ -0.74
CASC19-246ENST00000641625 SCAF1Q9H7N4 1312 aaKnown RBP10.44□□□□□ -0.74
CASC19-246ENST00000641625 ARID3CA6NKF2 412 aa10.44□□□□□ -0.74
CASC19-246ENST00000641625 WDR7Q9Y4E6 1490 aa10.42□□□□□ -0.74
CASC19-246ENST00000641625 ARHGAP35Q9NRY4 1499 aa10.41□□□□□ -0.74
CASC19-246ENST00000641625 EPRSP07814 1512 aaKnown RBP10.41□□□□□ -0.74
CASC19-246ENST00000641625 ATP10BO94823 1461 aa10.4□□□□□ -0.74
CASC19-246ENST00000641625 RAPGEF6Q8TEU7 1601 aa10.4□□□□□ -0.74
CASC19-246ENST00000641625 NUP153P49790 1475 aaKnown RBP10.4□□□□□ -0.75
CASC19-246ENST00000641625 GLI2P10070 1586 aa10.39□□□□□ -0.75
CASC19-246ENST00000641625 FMN1Q68DA7 1419 aa10.38□□□□□ -0.75
CASC19-246ENST00000641625 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.37□□□□□ -0.75
CASC19-246ENST00000641625 HNRNPUL2Q1KMD3 747 aaKnown RBP10.37□□□□□ -0.75
CASC19-246ENST00000641625 KCNH8Q96L42 1107 aa10.37□□□□□ -0.75
CASC19-246ENST00000641625 CLIP1P30622 1438 aa10.35□□□□□ -0.75
CASC19-246ENST00000641625 TSPOAP1O95153 1857 aa10.35□□□□□ -0.75
CASC19-246ENST00000641625 MAP3K4Q9Y6R4 1608 aa10.34□□□□□ -0.75
CASC19-246ENST00000641625 ATP1B4Q9UN42 357 aaPredicted RBP10.33□□□□□ -0.76
CASC19-246ENST00000641625 CD109Q6YHK3 1445 aa10.33□□□□□ -0.76
CASC19-246ENST00000641625 PPRC1Q5VV67 1664 aaKnown RBP10.32□□□□□ -0.76
CASC19-246ENST00000641625 PLEKHD1A6NEE1 506 aa10.32□□□□□ -0.76
CASC19-246ENST00000641625 TEX14Q8IWB6 1497 aa10.32□□□□□ -0.76
CASC19-246ENST00000641625 CDK13Q14004 1512 aaKnown RBP10.31□□□□□ -0.76
CASC19-246ENST00000641625 KDM6BO15054 1643 aa10.31□□□□□ -0.76
CASC19-246ENST00000641625 HECW1Q76N89 1606 aa10.31□□□□□ -0.76
CASC19-246ENST00000641625 MAGI3Q5TCQ9 1506 aa10.3□□□□□ -0.76
CASC19-246ENST00000641625 LOC105371045A0A1W2PR82 267 aa10.29□□□□□ -0.76
CASC19-246ENST00000641625 DCAF8L1A6NGE4 600 aa10.29□□□□□ -0.76
CASC19-246ENST00000641625 CEP162Q5TB80 1403 aa10.29□□□□□ -0.76
CASC19-246ENST00000641625 CASKIN1Q8WXD9 1431 aa10.29□□□□□ -0.76
CASC19-246ENST00000641625 CFAP43Q8NDM7 1665 aa10.29□□□□□ -0.76
CASC19-246ENST00000641625 PCF11O94913 1555 aaKnown RBP10.28□□□□□ -0.76
CASC19-246ENST00000641625 COL17A1Q9UMD9 1497 aaPredicted RBP10.28□□□□□ -0.76
CASC19-246ENST00000641625 ABCA9Q8IUA7 1624 aa10.27□□□□□ -0.76
CASC19-246ENST00000641625 SLC4A1APQ9BWU0 796 aaKnown RBP10.27□□□□□ -0.77
CASC19-246ENST00000641625 CDK11AQ9UQ88 783 aaPredicted RBP10.26□□□□□ -0.77
CASC19-246ENST00000641625 FYCO1Q9BQS8 1478 aa10.25□□□□□ -0.77
CASC19-246ENST00000641625 CCDC18Q5T9S5 1454 aa10.25□□□□□ -0.77
CASC19-246ENST00000641625 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.24□□□□□ -0.77
CASC19-246ENST00000641625 TROQ12816 1431 aaPredicted RBP10.24□□□□□ -0.77
CASC19-246ENST00000641625 TTC37Q6PGP7 1564 aa10.23□□□□□ -0.77
CASC19-246ENST00000641625 RNF39Q9H2S5 420 aa10.22□□□□□ -0.77
CASC19-246ENST00000641625 PHLDB1Q86UU1 1377 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms