RNA–Protein interactions for RNA: ENST00000640511.1

SPIN3-241, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,102 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-241ENST00000640511 IRX6P78412 446 aaPredicted RBP16.19■□□□□ 0.18
SPIN3-241ENST00000640511 IPO9Q96P70 1041 aaKnown RBP16.19■□□□□ 0.18
SPIN3-241ENST00000640511 ANP32AP39687 249 aaKnown RBP16.18■□□□□ 0.18
SPIN3-241ENST00000640511 PPP4R2Q9NY27 417 aa16.18■□□□□ 0.18
SPIN3-241ENST00000640511 A0A0U1RQG5 324 aaPredicted RBP16.17■□□□□ 0.18
SPIN3-241ENST00000640511 BAZ1BQ9UIG0 1483 aaKnown RBP16.17■□□□□ 0.18
SPIN3-241ENST00000640511 WASHC2CQ9Y4E1 1318 aa16.16■□□□□ 0.18
SPIN3-241ENST00000640511 PEG3Q9GZU2 1588 aa16.15■□□□□ 0.18
SPIN3-241ENST00000640511 CCER2I3L3R5 266 aa16.14■□□□□ 0.18
SPIN3-241ENST00000640511 USP35Q9P2H5 1018 aa16.14■□□□□ 0.17
SPIN3-241ENST00000640511 DHX57Q6P158 1386 aaKnown RBP16.12■□□□□ 0.17
SPIN3-241ENST00000640511 DDX10Q13206 875 aaKnown RBP16.12■□□□□ 0.17
SPIN3-241ENST00000640511 PDE4CQ08493 712 aa16.1■□□□□ 0.17
SPIN3-241ENST00000640511 CC2D2AQ9P2K1 1620 aa16.09■□□□□ 0.17
SPIN3-241ENST00000640511 TNIKQ9UKE5 1360 aa16.08■□□□□ 0.17
SPIN3-241ENST00000640511 NEFMP07197 916 aa16.07■□□□□ 0.16
SPIN3-241ENST00000640511 FGD1P98174 961 aa16.07■□□□□ 0.16
SPIN3-241ENST00000640511 CCDC88BA6NC98 1476 aa16.06■□□□□ 0.16
SPIN3-241ENST00000640511 RBM10P98175 930 aaKnown RBP16.06■□□□□ 0.16
SPIN3-241ENST00000640511 ANP32CO43423 234 aa16.05■□□□□ 0.16
SPIN3-241ENST00000640511 AAMPQ13685 434 aa16.04■□□□□ 0.16
SPIN3-241ENST00000640511 B4GALNT3Q6L9W6 998 aa16.03■□□□□ 0.16
SPIN3-241ENST00000640511 NCAPD3P42695 1498 aa16.03■□□□□ 0.16
SPIN3-241ENST00000640511 HMGXB3Q12766 1538 aa16■□□□□ 0.15
SPIN3-241ENST00000640511 PPP1R15AO75807 674 aaPredicted RBP15.98■□□□□ 0.15
SPIN3-241ENST00000640511 PDIA4P13667 645 aaKnown RBP15.98■□□□□ 0.15
SPIN3-241ENST00000640511 GSE1Q14687 1217 aa15.97■□□□□ 0.15
SPIN3-241ENST00000640511 HNRNPUQ00839 825 aaKnown RBP eCLIP15.97■□□□□ 0.15
SPIN3-241ENST00000640511 FAM43AQ8N2R8 423 aa15.97■□□□□ 0.15
SPIN3-241ENST00000640511 UBTFP17480 764 aaKnown RBP15.97■□□□□ 0.15
SPIN3-241ENST00000640511 PPM1GO15355 546 aaPredicted RBP15.95■□□□□ 0.14
SPIN3-241ENST00000640511 LAS1LQ9Y4W2 734 aaKnown RBP15.95■□□□□ 0.14
SPIN3-241ENST00000640511 EEA1Q15075 1411 aa15.93■□□□□ 0.14
SPIN3-241ENST00000640511 HSP90AA2PQ14568 343 aaPredicted RBP15.93■□□□□ 0.14
SPIN3-241ENST00000640511 BCL11BQ9C0K0 894 aaPredicted RBP15.91■□□□□ 0.14
SPIN3-241ENST00000640511 RRP9O43818 475 aaKnown RBP15.88■□□□□ 0.13
SPIN3-241ENST00000640511 FRAT1Q92837 279 aaPredicted RBP15.82■□□□□ 0.12
SPIN3-241ENST00000640511 NPM2Q86SE8 214 aaKnown RBP15.81■□□□□ 0.12
SPIN3-241ENST00000640511 HSP90AA1P07900 732 aaKnown RBP15.8■□□□□ 0.12
SPIN3-241ENST00000640511 AEBP2Q6ZN18 517 aaPredicted RBP15.8■□□□□ 0.12
SPIN3-241ENST00000640511 DNAJC5BQ9UF47 199 aa15.8■□□□□ 0.12
SPIN3-241ENST00000640511 ABCC8Q09428 1581 aa15.77■□□□□ 0.12
SPIN3-241ENST00000640511 NAP1L5Q96NT1 182 aaPredicted RBP15.75■□□□□ 0.11
SPIN3-241ENST00000640511 GOLGA3Q08378 1498 aa15.74■□□□□ 0.11
SPIN3-241ENST00000640511 HIRIP3Q9BW71 556 aaPredicted RBP15.73■□□□□ 0.11
SPIN3-241ENST00000640511 NFKBIBQ15653 356 aa15.73■□□□□ 0.11
SPIN3-241ENST00000640511 VPS8Q8N3P4 1428 aa15.73■□□□□ 0.11
SPIN3-241ENST00000640511 DCAF11Q8TEB1 546 aa15.72■□□□□ 0.11
SPIN3-241ENST00000640511 RRAGDQ9NQL2 400 aaPredicted RBP15.72■□□□□ 0.11
SPIN3-241ENST00000640511 CLIP1P30622 1438 aa15.72■□□□□ 0.11
SPIN3-241ENST00000640511 SOGA1O94964 1423 aa15.72■□□□□ 0.11
SPIN3-241ENST00000640511 SIN3AQ96ST3 1273 aa15.7■□□□□ 0.1
SPIN3-241ENST00000640511 WDR97A6NE52 1622 aa15.7■□□□□ 0.1
SPIN3-241ENST00000640511 CADPSQ9ULU8 1353 aa15.68■□□□□ 0.1
SPIN3-241ENST00000640511 CFTRP13569 1480 aa15.67■□□□□ 0.1
SPIN3-241ENST00000640511 PRDM4Q9UKN5 801 aa15.67■□□□□ 0.1
SPIN3-241ENST00000640511 TAF7LQ5H9L4 462 aa15.66■□□□□ 0.1
SPIN3-241ENST00000640511 DDRGK1Q96HY6 314 aa15.65■□□□□ 0.1
SPIN3-241ENST00000640511 CUX2O14529 1486 aa15.64■□□□□ 0.09
SPIN3-241ENST00000640511 RGS3P49796 1198 aa15.63■□□□□ 0.09
SPIN3-241ENST00000640511 NESP48681 1621 aa15.63■□□□□ 0.09
SPIN3-241ENST00000640511 CALD1Q05682 793 aaKnown RBP15.63■□□□□ 0.09
SPIN3-241ENST00000640511 PNNQ9H307 717 aaKnown RBP15.63■□□□□ 0.09
SPIN3-241ENST00000640511 PDE4AP27815 886 aa15.62■□□□□ 0.09
SPIN3-241ENST00000640511 TCERG1O14776 1098 aaKnown RBP15.61■□□□□ 0.09
SPIN3-241ENST00000640511 ZBED9Q6R2W3 1325 aa15.61■□□□□ 0.09
SPIN3-241ENST00000640511 CEP164Q9UPV0 1460 aa15.61■□□□□ 0.09
SPIN3-241ENST00000640511 MAPKBP1O60336 1514 aa15.6■□□□□ 0.09
SPIN3-241ENST00000640511 KLHL34Q8N239 644 aa15.59■□□□□ 0.09
SPIN3-241ENST00000640511 PRDM2Q13029 1718 aa15.59■□□□□ 0.09
SPIN3-241ENST00000640511 BACH2Q9BYV9 841 aa15.58■□□□□ 0.08
SPIN3-241ENST00000640511 RUSC2Q8N2Y8 1516 aa15.56■□□□□ 0.08
SPIN3-241ENST00000640511 SYNJ1O43426 1573 aa15.56■□□□□ 0.08
SPIN3-241ENST00000640511 BBXQ8WY36 941 aaPredicted RBP15.55■□□□□ 0.08
SPIN3-241ENST00000640511 NAP1L2Q9ULW6 460 aaPredicted RBP15.55■□□□□ 0.08
SPIN3-241ENST00000640511 FAM9BQ8IZU0 186 aa15.54■□□□□ 0.08
SPIN3-241ENST00000640511 CENPJQ9HC77 1338 aaPredicted RBP15.54■□□□□ 0.08
SPIN3-241ENST00000640511 RAB3GAP2Q9H2M9 1393 aa15.53■□□□□ 0.08
SPIN3-241ENST00000640511 RRBP1Q9P2E9 1410 aaKnown RBP15.53■□□□□ 0.08
SPIN3-241ENST00000640511 FANCD2Q9BXW9 1451 aa15.53■□□□□ 0.08
SPIN3-241ENST00000640511 LAMC3Q9Y6N6 1575 aa15.53■□□□□ 0.08
SPIN3-241ENST00000640511 MS4A1P11836 297 aa15.52■□□□□ 0.08
SPIN3-241ENST00000640511 CLCN1P35523 988 aa15.52■□□□□ 0.08
SPIN3-241ENST00000640511 PDCL3Q9H2J4 239 aa15.52■□□□□ 0.07
SPIN3-241ENST00000640511 FRAT2O75474 233 aaPredicted RBP15.5■□□□□ 0.07
SPIN3-241ENST00000640511 RNF123Q5XPI4 1314 aa15.5■□□□□ 0.07
SPIN3-241ENST00000640511 AKNAQ7Z591 1439 aa15.5■□□□□ 0.07
SPIN3-241ENST00000640511 L1TD1Q5T7N2 865 aaKnown RBP15.5■□□□□ 0.07
SPIN3-241ENST00000640511 CHMP4BQ9H444 224 aaKnown RBP15.49■□□□□ 0.07
SPIN3-241ENST00000640511 PAXIP1Q6ZW49 1069 aaPredicted RBP15.49■□□□□ 0.07
SPIN3-241ENST00000640511 ARID4BQ4LE39 1312 aaPredicted RBP15.48■□□□□ 0.07
SPIN3-241ENST00000640511 CCDC184Q52MB2 194 aa15.48■□□□□ 0.07
SPIN3-241ENST00000640511 GTF2E1P29083 439 aaPredicted RBP15.47■□□□□ 0.07
SPIN3-241ENST00000640511 SMG6Q86US8 1419 aaKnown RBP15.47■□□□□ 0.07
SPIN3-241ENST00000640511 CCNB3Q8WWL7 1395 aa15.47■□□□□ 0.07
SPIN3-241ENST00000640511 PDS5BQ9NTI5 1447 aa15.46■□□□□ 0.07
SPIN3-241ENST00000640511 RANGAP1P46060 587 aaPredicted RBP15.46■□□□□ 0.07
SPIN3-241ENST00000640511 SLC4A3P48751 1232 aa15.46■□□□□ 0.07
SPIN3-241ENST00000640511 CUX1P39880 1505 aa15.46■□□□□ 0.07
SPIN3-241ENST00000640511 TOP2BQ02880 1626 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms