RNA–Protein interactions for RNA: ENST00000640511.1

SPIN3-241, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,102 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-241ENST00000640511 NISCHQ9Y2I1 1504 aa21.36■■□□□ 1.01
SPIN3-241ENST00000640511 PELP1Q8IZL8 1130 aaKnown RBP20.75■□□□□ 0.91
SPIN3-241ENST00000640511 MYT1Q01538 1121 aa20.24■□□□□ 0.83
SPIN3-241ENST00000640511 HRCP23327 699 aa20.02■□□□□ 0.8
SPIN3-241ENST00000640511 PPARGC1BQ86YN6 1023 aaKnown RBP19.52■□□□□ 0.72
SPIN3-241ENST00000640511 SCAF1Q9H7N4 1312 aaKnown RBP19.44■□□□□ 0.7
SPIN3-241ENST00000640511 TTBK1Q5TCY1 1321 aaPredicted RBP19.28■□□□□ 0.68
SPIN3-241ENST00000640511 PCGF6Q9BYE7 350 aa19.22■□□□□ 0.67
SPIN3-241ENST00000640511 PRKCSHP14314 528 aaPredicted RBP18.83■□□□□ 0.61
SPIN3-241ENST00000640511 BCL11AQ9H165 835 aa18.8■□□□□ 0.6
SPIN3-241ENST00000640511 ACIN1Q9UKV3 1341 aaKnown RBP18.68■□□□□ 0.58
SPIN3-241ENST00000640511 MYO15BQ96JP2 1530 aa18.63■□□□□ 0.57
SPIN3-241ENST00000640511 ZEB1P37275 1124 aaPredicted RBP18.63■□□□□ 0.57
SPIN3-241ENST00000640511 FAM9AQ8IZU1 332 aaPredicted RBP18.62■□□□□ 0.57
SPIN3-241ENST00000640511 CCDC180Q9P1Z9 1646 aa18.61■□□□□ 0.57
SPIN3-241ENST00000640511 GTF3C3Q9Y5Q9 886 aa18.57■□□□□ 0.56
SPIN3-241ENST00000640511 NEUROD1Q13562 356 aa18.56■□□□□ 0.56
SPIN3-241ENST00000640511 CENPBP07199 599 aaPredicted RBP18.54■□□□□ 0.56
SPIN3-241ENST00000640511 TRIM26Q12899 539 aaPredicted RBP18.45■□□□□ 0.54
SPIN3-241ENST00000640511 DCAF1Q9Y4B6 1507 aa18.44■□□□□ 0.54
SPIN3-241ENST00000640511 ERICH6Q7L0X2 663 aa18.38■□□□□ 0.53
SPIN3-241ENST00000640511 SUPT5HO00267 1087 aaKnown RBP18.34■□□□□ 0.53
SPIN3-241ENST00000640511 CHIC1Q5VXU3 224 aa18.31■□□□□ 0.52
SPIN3-241ENST00000640511 APLP2Q06481 763 aa18.23■□□□□ 0.51
SPIN3-241ENST00000640511 ANP32EQ9BTT0 268 aa18.16■□□□□ 0.5
SPIN3-241ENST00000640511 SHROOM4Q9ULL8 1493 aa18.03■□□□□ 0.48
SPIN3-241ENST00000640511 DCAF8L2P0C7V8 631 aa18.01■□□□□ 0.47
SPIN3-241ENST00000640511 CSRNP3Q8WYN3 585 aa17.99■□□□□ 0.47
SPIN3-241ENST00000640511 DIEXFQ68CQ4 756 aaKnown RBP17.95■□□□□ 0.46
SPIN3-241ENST00000640511 LOC105371045A0A1W2PR82 267 aa17.95■□□□□ 0.46
SPIN3-241ENST00000640511 ZCCHC6Q5VYS8 1495 aaKnown RBP17.9■□□□□ 0.46
SPIN3-241ENST00000640511 ABCC9O60706 1549 aa17.87■□□□□ 0.45
SPIN3-241ENST00000640511 YTHDC1Q96MU7 727 aaKnown RBP17.7■□□□□ 0.42
SPIN3-241ENST00000640511 TSHZ2Q9NRE2 1034 aa17.63■□□□□ 0.41
SPIN3-241ENST00000640511 CCER1Q8TC90 406 aaPredicted RBP17.57■□□□□ 0.4
SPIN3-241ENST00000640511 TRIM41Q8WV44 630 aa17.55■□□□□ 0.4
SPIN3-241ENST00000640511 ANO8Q9HCE9 1232 aaPredicted RBP17.53■□□□□ 0.4
SPIN3-241ENST00000640511 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.52■□□□□ 0.4
SPIN3-241ENST00000640511 CLSPNQ9HAW4 1339 aa17.51■□□□□ 0.39
SPIN3-241ENST00000640511 SUPT16HQ9Y5B9 1047 aaKnown RBP17.47■□□□□ 0.39
SPIN3-241ENST00000640511 ZNF316A6NFI3 1004 aaPredicted RBP17.42■□□□□ 0.38
SPIN3-241ENST00000640511 SLC24A1O60721 1099 aa17.39■□□□□ 0.37
SPIN3-241ENST00000640511 NACADO15069 1562 aa17.37■□□□□ 0.37
SPIN3-241ENST00000640511 MIER1Q8N108 512 aa17.37■□□□□ 0.37
SPIN3-241ENST00000640511 UBE2Q2Q8WVN8 375 aa17.3■□□□□ 0.36
SPIN3-241ENST00000640511 RB1CC1Q8TDY2 1594 aa17.3■□□□□ 0.36
SPIN3-241ENST00000640511 SCRIBQ14160 1630 aa17.27■□□□□ 0.35
SPIN3-241ENST00000640511 EIF5BO60841 1220 aaKnown RBP17.23■□□□□ 0.35
SPIN3-241ENST00000640511 SALL2Q9Y467 1007 aaPredicted RBP17.21■□□□□ 0.35
SPIN3-241ENST00000640511 CCDC136Q96JN2 1154 aa17.15■□□□□ 0.34
SPIN3-241ENST00000640511 RBM19Q9Y4C8 960 aaKnown RBP17.13■□□□□ 0.33
SPIN3-241ENST00000640511 MYT1LQ9UL68 1186 aa17.12■□□□□ 0.33
SPIN3-241ENST00000640511 DEKP35659 375 aaKnown RBP17.07■□□□□ 0.32
SPIN3-241ENST00000640511 MSH5O43196 834 aa17.06■□□□□ 0.32
SPIN3-241ENST00000640511 ERICH6BQ5W0A0 696 aa17.03■□□□□ 0.32
SPIN3-241ENST00000640511 DAXXQ9UER7 740 aaPredicted RBP16.99■□□□□ 0.31
SPIN3-241ENST00000640511 BCANQ96GW7 911 aa16.95■□□□□ 0.3
SPIN3-241ENST00000640511 UNC13AQ9UPW8 1703 aa16.95■□□□□ 0.3
SPIN3-241ENST00000640511 PKNOX2Q96KN3 472 aa16.92■□□□□ 0.3
SPIN3-241ENST00000640511 PLEKHG5O94827 1062 aa16.91■□□□□ 0.3
SPIN3-241ENST00000640511 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.91■□□□□ 0.3
SPIN3-241ENST00000640511 PABPN1Q86U42 306 aaKnown RBP eCLIP16.89■□□□□ 0.29
SPIN3-241ENST00000640511 EHMT2Q96KQ7 1210 aa16.87■□□□□ 0.29
SPIN3-241ENST00000640511 FANCIQ9NVI1 1328 aa16.86■□□□□ 0.29
SPIN3-241ENST00000640511 FKBP8Q14318 412 aa16.85■□□□□ 0.29
SPIN3-241ENST00000640511 PODXL2Q9NZ53 605 aa16.76■□□□□ 0.27
SPIN3-241ENST00000640511 NEFLP07196 543 aa16.74■□□□□ 0.27
SPIN3-241ENST00000640511 RTN4Q9NQC3 1192 aaKnown RBP16.73■□□□□ 0.27
SPIN3-241ENST00000640511 BICRAQ9NZM4 1560 aa16.73■□□□□ 0.27
SPIN3-241ENST00000640511 IL27Q8NEV9 243 aa16.72■□□□□ 0.27
SPIN3-241ENST00000640511 ITGAEP38570 1179 aa16.69■□□□□ 0.26
SPIN3-241ENST00000640511 CECR2Q9BXF3 1484 aa16.66■□□□□ 0.26
SPIN3-241ENST00000640511 NBR1Q14596 966 aa16.6■□□□□ 0.25
SPIN3-241ENST00000640511 CDK11AQ9UQ88 783 aaPredicted RBP16.6■□□□□ 0.25
SPIN3-241ENST00000640511 RSF1Q96T23 1441 aaPredicted RBP16.56■□□□□ 0.24
SPIN3-241ENST00000640511 MROH2BQ7Z745 1585 aa16.54■□□□□ 0.24
SPIN3-241ENST00000640511 BAZ1AQ9NRL2 1556 aaPredicted RBP16.51■□□□□ 0.23
SPIN3-241ENST00000640511 WRNQ14191 1432 aaPredicted RBP eCLIP16.5■□□□□ 0.23
SPIN3-241ENST00000640511 KCNH8Q96L42 1107 aa16.49■□□□□ 0.23
SPIN3-241ENST00000640511 RTL5Q5HYW3 569 aaPredicted RBP16.48■□□□□ 0.23
SPIN3-241ENST00000640511 NOP58Q9Y2X3 529 aaKnown RBP16.48■□□□□ 0.23
SPIN3-241ENST00000640511 SMARCA4P51532 1647 aa16.45■□□□□ 0.22
SPIN3-241ENST00000640511 WIZO95785 1651 aa16.43■□□□□ 0.22
SPIN3-241ENST00000640511 HNRNPUL2Q1KMD3 747 aaKnown RBP16.41■□□□□ 0.22
SPIN3-241ENST00000640511 GLIPR1L2Q4G1C9 344 aa16.37■□□□□ 0.21
SPIN3-241ENST00000640511 ZMYND15Q9H091 742 aa16.37■□□□□ 0.21
SPIN3-241ENST00000640511 PAK3O75914 559 aaPredicted RBP16.36■□□□□ 0.21
SPIN3-241ENST00000640511 TIMELESSQ9UNS1 1208 aa16.35■□□□□ 0.21
SPIN3-241ENST00000640511 VSIG10Q8N0Z9 540 aa16.31■□□□□ 0.2
SPIN3-241ENST00000640511 TRIM52Q96A61 297 aa16.28■□□□□ 0.2
SPIN3-241ENST00000640511 EIF4G1Q04637 1599 aaKnown RBP16.28■□□□□ 0.2
SPIN3-241ENST00000640511 C11orf95C9JLR9 678 aaPredicted RBP16.27■□□□□ 0.19
SPIN3-241ENST00000640511 RSPH6AQ9H0K4 717 aa16.25■□□□□ 0.19
SPIN3-241ENST00000640511 CEP162Q5TB80 1403 aa16.23■□□□□ 0.19
SPIN3-241ENST00000640511 WASHC2AQ641Q2 1341 aa16.2■□□□□ 0.18
SPIN3-241ENST00000640511 ATAD2BQ9ULI0 1458 aa16.2■□□□□ 0.18
SPIN3-241ENST00000640511 ZBTB47Q9UFB7 747 aaPredicted RBP16.2■□□□□ 0.18
SPIN3-241ENST00000640511 TOP2AP11388 1531 aaKnown RBP16.19■□□□□ 0.18
SPIN3-241ENST00000640511 SMARCA2P51531 1590 aa16.19■□□□□ 0.18
SPIN3-241ENST00000640511 BRPF3Q9ULD4 1205 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms