RNA–Protein interactions for RNA: ENST00000639955.1

NECAP1-221, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NECAP1, Length 3,479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-221ENST00000639955 ARHGAP35Q9NRY4 1499 aa10.93□□□□□ -0.66
NECAP1-221ENST00000639955 RRP7BPQ9NSQ0 103 aa10.93□□□□□ -0.66
NECAP1-221ENST00000639955 TOP2BQ02880 1626 aa10.93□□□□□ -0.66
NECAP1-221ENST00000639955 CARMIL1Q5VZK9 1371 aa10.93□□□□□ -0.66
NECAP1-221ENST00000639955 FHOD3Q2V2M9 1422 aa10.93□□□□□ -0.66
NECAP1-221ENST00000639955 PRXQ9BXM0 1461 aa10.92□□□□□ -0.66
NECAP1-221ENST00000639955 PHLDB1Q86UU1 1377 aa10.91□□□□□ -0.66
NECAP1-221ENST00000639955 ANP32CO43423 234 aa10.9□□□□□ -0.66
NECAP1-221ENST00000639955 FOXD1Q16676 465 aa10.89□□□□□ -0.67
NECAP1-221ENST00000639955 ZNF326Q5BKZ1 582 aaKnown RBP10.88□□□□□ -0.67
NECAP1-221ENST00000639955 TSHZ2Q9NRE2 1034 aa10.88□□□□□ -0.67
NECAP1-221ENST00000639955 IGF1RP08069 1367 aa10.88□□□□□ -0.67
NECAP1-221ENST00000639955 TONSLQ96HA7 1378 aa10.87□□□□□ -0.67
NECAP1-221ENST00000639955 HNRNPUQ00839 825 aaKnown RBP eCLIP10.87□□□□□ -0.67
NECAP1-221ENST00000639955 RAD54L2Q9Y4B4 1467 aa10.86□□□□□ -0.67
NECAP1-221ENST00000639955 PEG3Q9GZU2 1588 aa10.86□□□□□ -0.67
NECAP1-221ENST00000639955 SETD5Q9C0A6 1442 aa10.86□□□□□ -0.67
NECAP1-221ENST00000639955 MTUS2Q5JR59 1369 aa10.85□□□□□ -0.67
NECAP1-221ENST00000639955 CLSPNQ9HAW4 1339 aa10.84□□□□□ -0.67
NECAP1-221ENST00000639955 FGD5Q6ZNL6 1462 aa10.84□□□□□ -0.67
NECAP1-221ENST00000639955 TDRD9Q8NDG6 1382 aaKnown RBP10.84□□□□□ -0.67
NECAP1-221ENST00000639955 DNAJC5BQ9UF47 199 aa10.83□□□□□ -0.67
NECAP1-221ENST00000639955 ANP32EQ9BTT0 268 aa10.83□□□□□ -0.68
NECAP1-221ENST00000639955 RRBP1Q9P2E9 1410 aaKnown RBP10.83□□□□□ -0.68
NECAP1-221ENST00000639955 WDR97A6NE52 1622 aa10.83□□□□□ -0.68
NECAP1-221ENST00000639955 FAM9BQ8IZU0 186 aa10.82□□□□□ -0.68
NECAP1-221ENST00000639955 ERICH3Q5RHP9 1530 aa10.81□□□□□ -0.68
NECAP1-221ENST00000639955 NESP48681 1621 aa10.8□□□□□ -0.68
NECAP1-221ENST00000639955 PPP1R15AO75807 674 aaPredicted RBP10.78□□□□□ -0.68
NECAP1-221ENST00000639955 CADPSQ9ULU8 1353 aa10.78□□□□□ -0.68
NECAP1-221ENST00000639955 CFTRP13569 1480 aa10.78□□□□□ -0.68
NECAP1-221ENST00000639955 ZNF777Q9ULD5 760 aaPredicted RBP10.78□□□□□ -0.68
NECAP1-221ENST00000639955 BIVM-ERCC5R4GMW8 1640 aa10.78□□□□□ -0.68
NECAP1-221ENST00000639955 NCAPD3P42695 1498 aa10.78□□□□□ -0.68
NECAP1-221ENST00000639955 LRRC9Q6ZRR7 1453 aa10.78□□□□□ -0.68
NECAP1-221ENST00000639955 FBLN2P98095 1184 aa10.77□□□□□ -0.69
NECAP1-221ENST00000639955 MAPKBP1O60336 1514 aa10.76□□□□□ -0.69
NECAP1-221ENST00000639955 TIAM1Q13009 1591 aa10.74□□□□□ -0.69
NECAP1-221ENST00000639955 PCF11O94913 1555 aaKnown RBP10.73□□□□□ -0.69
NECAP1-221ENST00000639955 SALL2Q9Y467 1007 aaPredicted RBP10.73□□□□□ -0.69
NECAP1-221ENST00000639955 FANCD2Q9BXW9 1451 aa10.73□□□□□ -0.69
NECAP1-221ENST00000639955 FHAD1B1AJZ9 1412 aa10.73□□□□□ -0.69
NECAP1-221ENST00000639955 CCDC184Q52MB2 194 aa10.72□□□□□ -0.69
NECAP1-221ENST00000639955 HSPA5P11021 654 aaKnown RBP10.71□□□□□ -0.69
NECAP1-221ENST00000639955 RBM19Q9Y4C8 960 aaKnown RBP10.7□□□□□ -0.7
NECAP1-221ENST00000639955 MRS2Q9HD23 443 aa10.69□□□□□ -0.7
NECAP1-221ENST00000639955 CCDC18Q5T9S5 1454 aa10.69□□□□□ -0.7
NECAP1-221ENST00000639955 ANO8Q9HCE9 1232 aaPredicted RBP10.68□□□□□ -0.7
NECAP1-221ENST00000639955 B4GALNT3Q6L9W6 998 aa10.68□□□□□ -0.7
NECAP1-221ENST00000639955 HMGXB3Q12766 1538 aa10.67□□□□□ -0.7
NECAP1-221ENST00000639955 PTPRKQ15262 1439 aa10.67□□□□□ -0.7
NECAP1-221ENST00000639955 ZNF644Q9H582 1327 aaPredicted RBP10.67□□□□□ -0.7
NECAP1-221ENST00000639955 L3MBTL2Q969R5 705 aa10.66□□□□□ -0.7
NECAP1-221ENST00000639955 FGD6Q6ZV73 1430 aa10.66□□□□□ -0.7
NECAP1-221ENST00000639955 KDM2AQ9Y2K7 1162 aa10.66□□□□□ -0.7
NECAP1-221ENST00000639955 SLC4A1APQ9BWU0 796 aaKnown RBP10.65□□□□□ -0.7
NECAP1-221ENST00000639955 EIF4G2P78344 907 aaKnown RBP eCLIP10.65□□□□□ -0.7
NECAP1-221ENST00000639955 POLA1P09884 1462 aaPredicted RBP10.64□□□□□ -0.71
NECAP1-221ENST00000639955 AQRO60306 1485 aaKnown RBP eCLIP10.64□□□□□ -0.716e-7■■■■■ 30.6
NECAP1-221ENST00000639955 WASHC2AQ641Q2 1341 aa10.63□□□□□ -0.71
NECAP1-221ENST00000639955 CCDC136Q96JN2 1154 aa10.63□□□□□ -0.71
NECAP1-221ENST00000639955 CC2D2AQ9P2K1 1620 aa10.63□□□□□ -0.71
NECAP1-221ENST00000639955 C11orf95C9JLR9 678 aaPredicted RBP10.63□□□□□ -0.71
NECAP1-221ENST00000639955 CDK11AQ9UQ88 783 aaPredicted RBP10.63□□□□□ -0.71
NECAP1-221ENST00000639955 MPHOSPH9Q99550 1183 aa10.62□□□□□ -0.71
NECAP1-221ENST00000639955 NCOA2Q15596 1464 aa10.6□□□□□ -0.71
NECAP1-221ENST00000639955 TOPBP1Q92547 1522 aa10.6□□□□□ -0.71
NECAP1-221ENST00000639955 CCER2I3L3R5 266 aa10.59□□□□□ -0.71
NECAP1-221ENST00000639955 FMN1Q68DA7 1419 aa10.59□□□□□ -0.71
NECAP1-221ENST00000639955 CASKIN1Q8WXD9 1431 aa10.58□□□□□ -0.72
NECAP1-221ENST00000639955 NBR1Q14596 966 aa10.57□□□□□ -0.72
NECAP1-221ENST00000639955 NBPF8Q3BBV2 869 aa10.57□□□□□ -0.72
NECAP1-221ENST00000639955 NAIPQ13075 1403 aa10.56□□□□□ -0.72
NECAP1-221ENST00000639955 PDS5BQ9NTI5 1447 aa10.56□□□□□ -0.72
NECAP1-221ENST00000639955 NPM2Q86SE8 214 aaKnown RBP10.55□□□□□ -0.72
NECAP1-221ENST00000639955 FYCO1Q9BQS8 1478 aa10.55□□□□□ -0.72
NECAP1-221ENST00000639955 CDK13Q14004 1512 aaKnown RBP10.55□□□□□ -0.72
NECAP1-221ENST00000639955 MYOM3Q5VTT5 1437 aa10.55□□□□□ -0.72
NECAP1-221ENST00000639955 UACAQ9BZF9 1416 aa10.55□□□□□ -0.72
NECAP1-221ENST00000639955 GAPVD1Q14C86 1478 aa10.55□□□□□ -0.72
NECAP1-221ENST00000639955 SLC24A1O60721 1099 aa10.54□□□□□ -0.72
NECAP1-221ENST00000639955 RGL3Q3MIN7 710 aa10.54□□□□□ -0.72
NECAP1-221ENST00000639955 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.54□□□□□ -0.72
NECAP1-221ENST00000639955 MSH5O43196 834 aa10.54□□□□□ -0.72
NECAP1-221ENST00000639955 TIMELESSQ9UNS1 1208 aa10.53□□□□□ -0.72
NECAP1-221ENST00000639955 CFDP1Q9UEE9 299 aaPredicted RBP10.53□□□□□ -0.72
NECAP1-221ENST00000639955 PRKRIP1Q9H875 184 aaPredicted RBP10.52□□□□□ -0.72
NECAP1-221ENST00000639955 EIF5BO60841 1220 aaKnown RBP10.52□□□□□ -0.73
NECAP1-221ENST00000639955 URB2Q14146 1524 aaKnown RBP10.51□□□□□ -0.73
NECAP1-221ENST00000639955 HFM1A2PYH4 1435 aa10.51□□□□□ -0.73
NECAP1-221ENST00000639955 PKD2Q13563 968 aa10.5□□□□□ -0.73
NECAP1-221ENST00000639955 PTPN23Q9H3S7 1636 aa10.5□□□□□ -0.73
NECAP1-221ENST00000639955 ABCA10Q8WWZ4 1543 aa10.49□□□□□ -0.73
NECAP1-221ENST00000639955 TMC1Q8TDI8 760 aa10.49□□□□□ -0.73
NECAP1-221ENST00000639955 DNMBPQ6XZF7 1577 aa10.49□□□□□ -0.73
NECAP1-221ENST00000639955 CFAP43Q8NDM7 1665 aa10.49□□□□□ -0.73
NECAP1-221ENST00000639955 KIF7Q2M1P5 1343 aa10.49□□□□□ -0.73
NECAP1-221ENST00000639955 CHMP7Q8WUX9 453 aaPredicted RBP10.49□□□□□ -0.73
NECAP1-221ENST00000639955 SENP3Q9H4L4 574 aaPredicted RBP10.49□□□□□ -0.73
NECAP1-221ENST00000639955 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms