RNA–Protein interactions for RNA: ENST00000639916.1

PAX6-259, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-259ENST00000639916 RAD54L2Q9Y4B4 1467 aa13.25□□□□□ -0.29
PAX6-259ENST00000639916 POLA1P09884 1462 aaPredicted RBP13.24□□□□□ -0.29
PAX6-259ENST00000639916 PDS5BQ9NTI5 1447 aa13.24□□□□□ -0.29
PAX6-259ENST00000639916 CARMIL1Q5VZK9 1371 aa13.24□□□□□ -0.29
PAX6-259ENST00000639916 MSH5O43196 834 aa13.22□□□□□ -0.29
PAX6-259ENST00000639916 URB2Q14146 1524 aaKnown RBP13.21□□□□□ -0.29
PAX6-259ENST00000639916 ABCA10Q8WWZ4 1543 aa13.21□□□□□ -0.29
PAX6-259ENST00000639916 CLSPNQ9HAW4 1339 aa13.2□□□□□ -0.3
PAX6-259ENST00000639916 ARAP1Q96P48 1450 aa13.2□□□□□ -0.3
PAX6-259ENST00000639916 MIER1Q8N108 512 aa13.19□□□□□ -0.3
PAX6-259ENST00000639916 ANO8Q9HCE9 1232 aaPredicted RBP13.18□□□□□ -0.3
PAX6-259ENST00000639916 ZNF316A6NFI3 1004 aaPredicted RBP13.17□□□□□ -0.3
PAX6-259ENST00000639916 KIF21AQ7Z4S6 1674 aa13.15□□□□□ -0.3
PAX6-259ENST00000639916 ARHGAP35Q9NRY4 1499 aa13.15□□□□□ -0.3
PAX6-259ENST00000639916 TDRD9Q8NDG6 1382 aaKnown RBP13.12□□□□□ -0.31
PAX6-259ENST00000639916 PIAS4Q8N2W9 510 aaPredicted RBP13.1□□□□□ -0.31
PAX6-259ENST00000639916 WDR97A6NE52 1622 aa13.09□□□□□ -0.31
PAX6-259ENST00000639916 KANK4Q5T7N3 995 aaPredicted RBP13.09□□□□□ -0.31
PAX6-259ENST00000639916 HNRNPUL2Q1KMD3 747 aaKnown RBP13.08□□□□□ -0.32
PAX6-259ENST00000639916 CUL7Q14999 1698 aa13.08□□□□□ -0.32
PAX6-259ENST00000639916 GAPVD1Q14C86 1478 aa13.07□□□□□ -0.32
PAX6-259ENST00000639916 ABCA5Q8WWZ7 1642 aa13.05□□□□□ -0.32
PAX6-259ENST00000639916 P3H3Q8IVL6 736 aa13.05□□□□□ -0.32
PAX6-259ENST00000639916 MRC2Q9UBG0 1479 aa13.03□□□□□ -0.32
PAX6-259ENST00000639916 TARBP1Q13395 1621 aaKnown RBP13.03□□□□□ -0.32
PAX6-259ENST00000639916 RBM19Q9Y4C8 960 aaKnown RBP13□□□□□ -0.33
PAX6-259ENST00000639916 FHAD1B1AJZ9 1412 aa12.99□□□□□ -0.33
PAX6-259ENST00000639916 ADRA2BP18089 450 aa12.99□□□□□ -0.33
PAX6-259ENST00000639916 UBE2Q2Q8WVN8 375 aa12.98□□□□□ -0.33
PAX6-259ENST00000639916 CTTNBP2Q8WZ74 1663 aa12.98□□□□□ -0.33
PAX6-259ENST00000639916 PPP6R1Q9UPN7 881 aa12.98□□□□□ -0.33
PAX6-259ENST00000639916 FHOD3Q2V2M9 1422 aa12.98□□□□□ -0.33
PAX6-259ENST00000639916 AQRO60306 1485 aaKnown RBP eCLIP12.97□□□□□ -0.33
PAX6-259ENST00000639916 ATP1B4Q9UN42 357 aaPredicted RBP12.97□□□□□ -0.33
PAX6-259ENST00000639916 SALL2Q9Y467 1007 aaPredicted RBP12.96□□□□□ -0.33
PAX6-259ENST00000639916 EFCAB5A4FU69 1503 aa12.96□□□□□ -0.33
PAX6-259ENST00000639916 TIAM1Q13009 1591 aa12.95□□□□□ -0.34
PAX6-259ENST00000639916 MAP3K1Q13233 1512 aa12.95□□□□□ -0.34
PAX6-259ENST00000639916 RRBP1Q9P2E9 1410 aaKnown RBP12.93□□□□□ -0.34
PAX6-259ENST00000639916 ERCC6Q03468 1493 aa12.93□□□□□ -0.34
PAX6-259ENST00000639916 WDR62O43379 1518 aa12.93□□□□□ -0.34
PAX6-259ENST00000639916 PCF11O94913 1555 aaKnown RBP12.92□□□□□ -0.34
PAX6-259ENST00000639916 IFT140Q96RY7 1462 aa12.92□□□□□ -0.34
PAX6-259ENST00000639916 PBRM1Q86U86 1689 aa12.92□□□□□ -0.34
PAX6-259ENST00000639916 LRRC9Q6ZRR7 1453 aa12.91□□□□□ -0.34
PAX6-259ENST00000639916 CCNB3Q8WWL7 1395 aa12.9□□□□□ -0.34
PAX6-259ENST00000639916 GRIN2BQ13224 1484 aa12.9□□□□□ -0.34
PAX6-259ENST00000639916 ZNF608Q9ULD9 1512 aaPredicted RBP12.9□□□□□ -0.34
PAX6-259ENST00000639916 CASKIN1Q8WXD9 1431 aa12.9□□□□□ -0.34
PAX6-259ENST00000639916 DEKP35659 375 aaKnown RBP12.9□□□□□ -0.35
PAX6-259ENST00000639916 FMN1Q68DA7 1419 aa12.89□□□□□ -0.35
PAX6-259ENST00000639916 CCDC136Q96JN2 1154 aa12.89□□□□□ -0.35
PAX6-259ENST00000639916 FYCO1Q9BQS8 1478 aa12.89□□□□□ -0.35
PAX6-259ENST00000639916 MYT1LQ9UL68 1186 aa12.88□□□□□ -0.35
PAX6-259ENST00000639916 SAMD9Q5K651 1589 aa12.87□□□□□ -0.35
PAX6-259ENST00000639916 BCANQ96GW7 911 aa12.87□□□□□ -0.35
PAX6-259ENST00000639916 ADAMTS12P58397 1594 aa12.87□□□□□ -0.35
PAX6-259ENST00000639916 ITGAEP38570 1179 aa12.86□□□□□ -0.35
PAX6-259ENST00000639916 CFAP43Q8NDM7 1665 aa12.86□□□□□ -0.35
PAX6-259ENST00000639916 PHLDB1Q86UU1 1377 aa12.85□□□□□ -0.35
PAX6-259ENST00000639916 ERICH6BQ5W0A0 696 aa12.84□□□□□ -0.35
PAX6-259ENST00000639916 SNAPC4Q5SXM2 1469 aa12.84□□□□□ -0.35
PAX6-259ENST00000639916 THOC2Q8NI27 1593 aaKnown RBP12.82□□□□□ -0.36
PAX6-259ENST00000639916 IQGAP2Q13576 1575 aa12.81□□□□□ -0.36
PAX6-259ENST00000639916 FAM50AQ14320 339 aaKnown RBP12.8□□□□□ -0.36
PAX6-259ENST00000639916 EIF4G3O43432 1585 aaKnown RBP12.8□□□□□ -0.36
PAX6-259ENST00000639916 EIF5BO60841 1220 aaKnown RBP12.8□□□□□ -0.36
PAX6-259ENST00000639916 MTUS2Q5JR59 1369 aa12.79□□□□□ -0.36
PAX6-259ENST00000639916 FANCIQ9NVI1 1328 aa12.78□□□□□ -0.36
PAX6-259ENST00000639916 DHX57Q6P158 1386 aaKnown RBP12.78□□□□□ -0.36
PAX6-259ENST00000639916 FKBP8Q14318 412 aa12.76□□□□□ -0.37
PAX6-259ENST00000639916 GRIN2AQ12879 1464 aa12.76□□□□□ -0.37
PAX6-259ENST00000639916 CHMP7Q8WUX9 453 aaPredicted RBP12.75□□□□□ -0.37
PAX6-259ENST00000639916 KIAA0586Q9BVV6 1533 aa12.75□□□□□ -0.37
PAX6-259ENST00000639916 SLC24A1O60721 1099 aa12.75□□□□□ -0.37
PAX6-259ENST00000639916 LRRIQ1Q96JM4 1722 aa12.75□□□□□ -0.37
PAX6-259ENST00000639916 FBLN2P98095 1184 aa12.74□□□□□ -0.37
PAX6-259ENST00000639916 MAGI1Q96QZ7 1491 aaPredicted RBP12.74□□□□□ -0.37
PAX6-259ENST00000639916 UGGT2Q9NYU1 1516 aa12.74□□□□□ -0.37
PAX6-259ENST00000639916 RAB3GAP2Q9H2M9 1393 aa12.72□□□□□ -0.37
PAX6-259ENST00000639916 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.72□□□□□ -0.37
PAX6-259ENST00000639916 SYNJ2O15056 1496 aa12.71□□□□□ -0.37
PAX6-259ENST00000639916 FGD6Q6ZV73 1430 aa12.71□□□□□ -0.38
PAX6-259ENST00000639916 SETD5Q9C0A6 1442 aa12.71□□□□□ -0.38
PAX6-259ENST00000639916 CCDC18Q5T9S5 1454 aa12.7□□□□□ -0.38
PAX6-259ENST00000639916 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.7□□□□□ -0.38
PAX6-259ENST00000639916 NCOA2Q15596 1464 aa12.7□□□□□ -0.38
PAX6-259ENST00000639916 HECW1Q76N89 1606 aa12.69□□□□□ -0.38
PAX6-259ENST00000639916 ARID3CA6NKF2 412 aa12.69□□□□□ -0.38
PAX6-259ENST00000639916 DISP1Q96F81 1524 aa12.69□□□□□ -0.38
PAX6-259ENST00000639916 EPRSP07814 1512 aaKnown RBP12.68□□□□□ -0.38
PAX6-259ENST00000639916 EHBP1L1Q8N3D4 1523 aa12.68□□□□□ -0.38
PAX6-259ENST00000639916 SUPT6HQ7KZ85 1726 aaKnown RBP12.67□□□□□ -0.38
PAX6-259ENST00000639916 KIAA0556O60303 1618 aa12.67□□□□□ -0.38
PAX6-259ENST00000639916 MAGI3Q5TCQ9 1506 aa12.67□□□□□ -0.38
PAX6-259ENST00000639916 MYOM3Q5VTT5 1437 aa12.67□□□□□ -0.38
PAX6-259ENST00000639916 PKNOX2Q96KN3 472 aa12.66□□□□□ -0.38
PAX6-259ENST00000639916 CEP170Q5SW79 1584 aa12.66□□□□□ -0.38
PAX6-259ENST00000639916 POTEDQ86YR6 584 aa12.65□□□□□ -0.38
PAX6-259ENST00000639916 CDK13Q14004 1512 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms