RNA–Protein interactions for RNA: ENST00000639658.1

POLR2B-213, Transcript of RNA polymerase II subunit B, humanhuman

TSL 5 BASIC

Gene POLR2B, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-213ENST00000639658 POLR1AO95602 1720 aaPredicted RBP7.8□□□□□ -1.16
POLR2B-213ENST00000639658 ABCA5Q8WWZ7 1642 aa7.8□□□□□ -1.16
POLR2B-213ENST00000639658 CCDC136Q96JN2 1154 aa7.79□□□□□ -1.16
POLR2B-213ENST00000639658 SOGA1O94964 1423 aa7.78□□□□□ -1.16
POLR2B-213ENST00000639658 IPO9Q96P70 1041 aaKnown RBP7.78□□□□□ -1.16
POLR2B-213ENST00000639658 RNF123Q5XPI4 1314 aa7.78□□□□□ -1.16
POLR2B-213ENST00000639658 WDR97A6NE52 1622 aa7.78□□□□□ -1.16
POLR2B-213ENST00000639658 ARXQ96QS3 562 aa7.77□□□□□ -1.17
POLR2B-213ENST00000639658 NCOA2Q15596 1464 aa7.77□□□□□ -1.17
POLR2B-213ENST00000639658 NCBP3Q53F19 620 aaKnown RBP7.76□□□□□ -1.17
POLR2B-213ENST00000639658 FAM43AQ8N2R8 423 aa7.74□□□□□ -1.17
POLR2B-213ENST00000639658 CECR2Q9BXF3 1484 aa7.74□□□□□ -1.17
POLR2B-213ENST00000639658 IL27Q8NEV9 243 aa7.74□□□□□ -1.17
POLR2B-213ENST00000639658 BCANQ96GW7 911 aa7.73□□□□□ -1.17
POLR2B-213ENST00000639658 KCNH8Q96L42 1107 aa7.73□□□□□ -1.17
POLR2B-213ENST00000639658 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.73□□□□□ -1.17
POLR2B-213ENST00000639658 FGD1P98174 961 aa7.73□□□□□ -1.17
POLR2B-213ENST00000639658 ARAP1Q96P48 1450 aa7.73□□□□□ -1.17
POLR2B-213ENST00000639658 RTL5Q5HYW3 569 aaPredicted RBP7.72□□□□□ -1.17
POLR2B-213ENST00000639658 PAK3O75914 559 aaPredicted RBP7.71□□□□□ -1.17
POLR2B-213ENST00000639658 ZMYND15Q9H091 742 aa7.71□□□□□ -1.17
POLR2B-213ENST00000639658 KDM5BQ9UGL1 1544 aa7.71□□□□□ -1.18
POLR2B-213ENST00000639658 FHAD1B1AJZ9 1412 aa7.71□□□□□ -1.18
POLR2B-213ENST00000639658 RUSC2Q8N2Y8 1516 aa7.7□□□□□ -1.18
POLR2B-213ENST00000639658 SMARCA4P51532 1647 aa7.7□□□□□ -1.18
POLR2B-213ENST00000639658 BIVM-ERCC5R4GMW8 1640 aa7.7□□□□□ -1.18
POLR2B-213ENST00000639658 PPM1GO15355 546 aaPredicted RBP7.7□□□□□ -1.18
POLR2B-213ENST00000639658 CENPJQ9HC77 1338 aaPredicted RBP7.69□□□□□ -1.18
POLR2B-213ENST00000639658 SMG6Q86US8 1419 aaKnown RBP7.69□□□□□ -1.18
POLR2B-213ENST00000639658 CFAP43Q8NDM7 1665 aa7.69□□□□□ -1.18
POLR2B-213ENST00000639658 ITGAEP38570 1179 aa7.68□□□□□ -1.18
POLR2B-213ENST00000639658 RANGAP1P46060 587 aaPredicted RBP7.68□□□□□ -1.18
POLR2B-213ENST00000639658 AAMPQ13685 434 aa7.68□□□□□ -1.18
POLR2B-213ENST00000639658 CCNB3Q8WWL7 1395 aa7.68□□□□□ -1.18
POLR2B-213ENST00000639658 ZBED9Q6R2W3 1325 aa7.67□□□□□ -1.18
POLR2B-213ENST00000639658 PDIA4P13667 645 aaKnown RBP7.67□□□□□ -1.18
POLR2B-213ENST00000639658 PRXQ9BXM0 1461 aa7.67□□□□□ -1.18
POLR2B-213ENST00000639658 ANP32CO43423 234 aa7.67□□□□□ -1.18
POLR2B-213ENST00000639658 ANP32AP39687 249 aaKnown RBP7.67□□□□□ -1.18
POLR2B-213ENST00000639658 PDE4CQ08493 712 aa7.67□□□□□ -1.18
POLR2B-213ENST00000639658 HNRNPUL2Q1KMD3 747 aaKnown RBP7.66□□□□□ -1.18
POLR2B-213ENST00000639658 SETD5Q9C0A6 1442 aa7.65□□□□□ -1.18
POLR2B-213ENST00000639658 RRP9O43818 475 aaKnown RBP7.65□□□□□ -1.18
POLR2B-213ENST00000639658 ZBTB47Q9UFB7 747 aaPredicted RBP7.65□□□□□ -1.18
POLR2B-213ENST00000639658 TOP2BQ02880 1626 aa7.65□□□□□ -1.19
POLR2B-213ENST00000639658 MS4A1P11836 297 aa7.64□□□□□ -1.19
POLR2B-213ENST00000639658 TIAM1Q13009 1591 aa7.64□□□□□ -1.19
POLR2B-213ENST00000639658 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.64□□□□□ -1.19
POLR2B-213ENST00000639658 RAB3GAP2Q9H2M9 1393 aa7.64□□□□□ -1.19
POLR2B-213ENST00000639658 VIRMAQ69YN4 1812 aaKnown RBP7.64□□□□□ -1.19
POLR2B-213ENST00000639658 GSE1Q14687 1217 aa7.63□□□□□ -1.19
POLR2B-213ENST00000639658 TAF7LQ5H9L4 462 aa7.63□□□□□ -1.19
POLR2B-213ENST00000639658 RAPGEF2Q9Y4G8 1499 aa7.63□□□□□ -1.19
POLR2B-213ENST00000639658 ZMYM4Q5VZL5 1548 aa7.62□□□□□ -1.19
POLR2B-213ENST00000639658 CNTLNQ9NXG0 1405 aa7.61□□□□□ -1.19
POLR2B-213ENST00000639658 NBR1Q14596 966 aa7.6□□□□□ -1.19
POLR2B-213ENST00000639658 CCDC144AA2RUR9 1427 aa7.59□□□□□ -1.19
POLR2B-213ENST00000639658 TCERG1O14776 1098 aaKnown RBP7.59□□□□□ -1.19
POLR2B-213ENST00000639658 DDX10Q13206 875 aaKnown RBP7.58□□□□□ -1.2
POLR2B-213ENST00000639658 INSRP06213 1382 aa7.58□□□□□ -1.2
POLR2B-213ENST00000639658 RBM10P98175 930 aaKnown RBP7.58□□□□□ -1.2
POLR2B-213ENST00000639658 HECW1Q76N89 1606 aa7.58□□□□□ -1.2
POLR2B-213ENST00000639658 DDRGK1Q96HY6 314 aa7.57□□□□□ -1.2
POLR2B-213ENST00000639658 ZNF326Q5BKZ1 582 aaKnown RBP7.57□□□□□ -1.2
POLR2B-213ENST00000639658 TRIM52Q96A61 297 aa7.57□□□□□ -1.2
POLR2B-213ENST00000639658 VSIG10Q8N0Z9 540 aa7.57□□□□□ -1.2
POLR2B-213ENST00000639658 NCOA1Q15788 1441 aa7.56□□□□□ -1.2
POLR2B-213ENST00000639658 CALD1Q05682 793 aaKnown RBP7.56□□□□□ -1.2
POLR2B-213ENST00000639658 RSPH4AQ5TD94 716 aa7.55□□□□□ -1.2
POLR2B-213ENST00000639658 CCDC18Q5T9S5 1454 aa7.55□□□□□ -1.2
POLR2B-213ENST00000639658 NEFMP07197 916 aa7.55□□□□□ -1.2
POLR2B-213ENST00000639658 UBTFP17480 764 aaKnown RBP7.55□□□□□ -1.2
POLR2B-213ENST00000639658 BACH2Q9BYV9 841 aa7.54□□□□□ -1.2
POLR2B-213ENST00000639658 GCC2Q8IWJ2 1684 aa7.54□□□□□ -1.2
POLR2B-213ENST00000639658 LRRC9Q6ZRR7 1453 aa7.54□□□□□ -1.2
POLR2B-213ENST00000639658 BRPF3Q9ULD4 1205 aa7.54□□□□□ -1.2
POLR2B-213ENST00000639658 UACAQ9BZF9 1416 aa7.53□□□□□ -1.2
POLR2B-213ENST00000639658 ARHGAP35Q9NRY4 1499 aa7.53□□□□□ -1.2
POLR2B-213ENST00000639658 CLCN1P35523 988 aa7.53□□□□□ -1.2
POLR2B-213ENST00000639658 AQRO60306 1485 aaKnown RBP eCLIP7.52□□□□□ -1.27e-7■■■□□ 18.3
POLR2B-213ENST00000639658 HNRNPUQ00839 825 aaKnown RBP eCLIP7.52□□□□□ -1.21
POLR2B-213ENST00000639658 PTPN23Q9H3S7 1636 aa7.52□□□□□ -1.21
POLR2B-213ENST00000639658 MYOM3Q5VTT5 1437 aa7.52□□□□□ -1.21
POLR2B-213ENST00000639658 AKNAQ7Z591 1439 aa7.52□□□□□ -1.21
POLR2B-213ENST00000639658 PRDM4Q9UKN5 801 aa7.52□□□□□ -1.21
POLR2B-213ENST00000639658 SCAPERQ9BY12 1400 aa7.51□□□□□ -1.21
POLR2B-213ENST00000639658 B4GALNT3Q6L9W6 998 aa7.51□□□□□ -1.21
POLR2B-213ENST00000639658 NUDCQ9Y266 331 aa7.51□□□□□ -1.21
POLR2B-213ENST00000639658 CTTNBP2Q8WZ74 1663 aa7.51□□□□□ -1.21
POLR2B-213ENST00000639658 HFM1A2PYH4 1435 aa7.51□□□□□ -1.21
POLR2B-213ENST00000639658 TERF1P54274 439 aa7.5□□□□□ -1.21
POLR2B-213ENST00000639658 RTN4Q9NQC3 1192 aaKnown RBP7.5□□□□□ -1.21
POLR2B-213ENST00000639658 NFKBIBQ15653 356 aa7.5□□□□□ -1.21
POLR2B-213ENST00000639658 SPATA31E1Q6ZUB1 1445 aa7.49□□□□□ -1.21
POLR2B-213ENST00000639658 HSP90AA2PQ14568 343 aaPredicted RBP7.49□□□□□ -1.21
POLR2B-213ENST00000639658 FRAT1Q92837 279 aaPredicted RBP7.49□□□□□ -1.21
POLR2B-213ENST00000639658 E9PCH4 1651 aa7.49□□□□□ -1.21
POLR2B-213ENST00000639658 DCAF8L2P0C7V8 631 aa7.49□□□□□ -1.21
POLR2B-213ENST00000639658 L1TD1Q5T7N2 865 aaKnown RBP7.48□□□□□ -1.21
POLR2B-213ENST00000639658 KANK4Q5T7N3 995 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms