RNA–Protein interactions for RNA: ENST00000639282.1

KCNMA1-255, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 2

Gene KCNMA1, Length 2,507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-255ENST00000639282 ERCC6Q03468 1493 aa16.44■□□□□ 0.22
KCNMA1-255ENST00000639282 P3H3Q8IVL6 736 aa16.43■□□□□ 0.22
KCNMA1-255ENST00000639282 KCNH8Q96L42 1107 aa16.43■□□□□ 0.22
KCNMA1-255ENST00000639282 SUPT16HQ9Y5B9 1047 aaKnown RBP16.41■□□□□ 0.22
KCNMA1-255ENST00000639282 ATP1B4Q9UN42 357 aaPredicted RBP16.41■□□□□ 0.22
KCNMA1-255ENST00000639282 FAM50AQ14320 339 aaKnown RBP16.39■□□□□ 0.21
KCNMA1-255ENST00000639282 CARMIL1Q5VZK9 1371 aa16.39■□□□□ 0.21
KCNMA1-255ENST00000639282 SIN3AQ96ST3 1273 aa16.38■□□□□ 0.21
KCNMA1-255ENST00000639282 MAPKBP1O60336 1514 aa16.37■□□□□ 0.21
KCNMA1-255ENST00000639282 PHLDB1Q86UU1 1377 aa16.37■□□□□ 0.21
KCNMA1-255ENST00000639282 TIAM1Q13009 1591 aa16.36■□□□□ 0.21
KCNMA1-255ENST00000639282 FGD5Q6ZNL6 1462 aa16.34■□□□□ 0.21
KCNMA1-255ENST00000639282 MRC2Q9UBG0 1479 aa16.34■□□□□ 0.21
KCNMA1-255ENST00000639282 LRRC9Q6ZRR7 1453 aa16.33■□□□□ 0.2
KCNMA1-255ENST00000639282 SETD5Q9C0A6 1442 aa16.33■□□□□ 0.2
KCNMA1-255ENST00000639282 THOC2Q8NI27 1593 aaKnown RBP16.31■□□□□ 0.2
KCNMA1-255ENST00000639282 DDX10Q13206 875 aaKnown RBP16.3■□□□□ 0.2
KCNMA1-255ENST00000639282 HIRIP3Q9BW71 556 aaPredicted RBP16.3■□□□□ 0.2
KCNMA1-255ENST00000639282 URB2Q14146 1524 aaKnown RBP16.29■□□□□ 0.2
KCNMA1-255ENST00000639282 WDR62O43379 1518 aa16.27■□□□□ 0.2
KCNMA1-255ENST00000639282 DNMBPQ6XZF7 1577 aa16.27■□□□□ 0.19
KCNMA1-255ENST00000639282 WDR97A6NE52 1622 aa16.26■□□□□ 0.19
KCNMA1-255ENST00000639282 MAP3K1Q13233 1512 aa16.26■□□□□ 0.19
KCNMA1-255ENST00000639282 FHOD3Q2V2M9 1422 aa16.26■□□□□ 0.19
KCNMA1-255ENST00000639282 TOPBP1Q92547 1522 aa16.25■□□□□ 0.19
KCNMA1-255ENST00000639282 PCF11O94913 1555 aaKnown RBP16.24■□□□□ 0.19
KCNMA1-255ENST00000639282 FHAD1B1AJZ9 1412 aa16.23■□□□□ 0.19
KCNMA1-255ENST00000639282 RAD54L2Q9Y4B4 1467 aa16.22■□□□□ 0.19
KCNMA1-255ENST00000639282 BCANQ96GW7 911 aa16.22■□□□□ 0.19
KCNMA1-255ENST00000639282 TSHZ2Q9NRE2 1034 aa16.18■□□□□ 0.18
KCNMA1-255ENST00000639282 PPP1R15AO75807 674 aaPredicted RBP16.16■□□□□ 0.18
KCNMA1-255ENST00000639282 CFAP43Q8NDM7 1665 aa16.15■□□□□ 0.18
KCNMA1-255ENST00000639282 POLA1P09884 1462 aaPredicted RBP16.14■□□□□ 0.17
KCNMA1-255ENST00000639282 FKBP8Q14318 412 aa16.13■□□□□ 0.17
KCNMA1-255ENST00000639282 TRIM52Q96A61 297 aa16.13■□□□□ 0.17
KCNMA1-255ENST00000639282 CASKIN1Q8WXD9 1431 aa16.11■□□□□ 0.17
KCNMA1-255ENST00000639282 FYCO1Q9BQS8 1478 aa16.11■□□□□ 0.17
KCNMA1-255ENST00000639282 IFT140Q96RY7 1462 aa16.08■□□□□ 0.17
KCNMA1-255ENST00000639282 TIMELESSQ9UNS1 1208 aa16.08■□□□□ 0.17
KCNMA1-255ENST00000639282 ABCA10Q8WWZ4 1543 aa16.08■□□□□ 0.16
KCNMA1-255ENST00000639282 FGD6Q6ZV73 1430 aa16.08■□□□□ 0.16
KCNMA1-255ENST00000639282 ANP32CO43423 234 aa16.07■□□□□ 0.16
KCNMA1-255ENST00000639282 PTPRKQ15262 1439 aa16.07■□□□□ 0.16
KCNMA1-255ENST00000639282 MTUS2Q5JR59 1369 aa16.06■□□□□ 0.16
KCNMA1-255ENST00000639282 TONSLQ96HA7 1378 aa16.06■□□□□ 0.16
KCNMA1-255ENST00000639282 TARBP1Q13395 1621 aaKnown RBP16.06■□□□□ 0.16
KCNMA1-255ENST00000639282 EFCAB5A4FU69 1503 aa16.04■□□□□ 0.16
KCNMA1-255ENST00000639282 CCDC18Q5T9S5 1454 aa16.04■□□□□ 0.16
KCNMA1-255ENST00000639282 TDRD9Q8NDG6 1382 aaKnown RBP16.03■□□□□ 0.16
KCNMA1-255ENST00000639282 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.03■□□□□ 0.16
KCNMA1-255ENST00000639282 FMN1Q68DA7 1419 aa16.02■□□□□ 0.16
KCNMA1-255ENST00000639282 AQRO60306 1485 aaKnown RBP eCLIP16.02■□□□□ 0.15
KCNMA1-255ENST00000639282 SNAPC4Q5SXM2 1469 aa16.01■□□□□ 0.15
KCNMA1-255ENST00000639282 CCER2I3L3R5 266 aa16■□□□□ 0.15
KCNMA1-255ENST00000639282 HFM1A2PYH4 1435 aa15.98■□□□□ 0.15
KCNMA1-255ENST00000639282 CHIC2Q9UKJ5 165 aa15.98■□□□□ 0.15
KCNMA1-255ENST00000639282 CTTNBP2Q8WZ74 1663 aa15.98■□□□□ 0.15
KCNMA1-255ENST00000639282 NEFLP07196 543 aa15.98■□□□□ 0.15
KCNMA1-255ENST00000639282 RRP7BPQ9NSQ0 103 aa15.97■□□□□ 0.15
KCNMA1-255ENST00000639282 UACAQ9BZF9 1416 aa15.97■□□□□ 0.15
KCNMA1-255ENST00000639282 CUL7Q14999 1698 aa15.97■□□□□ 0.15
KCNMA1-255ENST00000639282 NCOA2Q15596 1464 aa15.96■□□□□ 0.15
KCNMA1-255ENST00000639282 NAIPQ13075 1403 aa15.96■□□□□ 0.15
KCNMA1-255ENST00000639282 PTPN23Q9H3S7 1636 aa15.95■□□□□ 0.14
KCNMA1-255ENST00000639282 ZNF608Q9ULD9 1512 aaPredicted RBP15.95■□□□□ 0.14
KCNMA1-255ENST00000639282 MYOM3Q5VTT5 1437 aa15.94■□□□□ 0.14
KCNMA1-255ENST00000639282 ARID3CA6NKF2 412 aa15.93■□□□□ 0.14
KCNMA1-255ENST00000639282 LRRIQ1Q96JM4 1722 aa15.93■□□□□ 0.14
KCNMA1-255ENST00000639282 ABCA5Q8WWZ7 1642 aa15.92■□□□□ 0.14
KCNMA1-255ENST00000639282 EIF4G3O43432 1585 aaKnown RBP15.91■□□□□ 0.14
KCNMA1-255ENST00000639282 GAPVD1Q14C86 1478 aa15.91■□□□□ 0.14
KCNMA1-255ENST00000639282 GRIN2BQ13224 1484 aa15.9■□□□□ 0.14
KCNMA1-255ENST00000639282 ANP32EQ9BTT0 268 aa15.9■□□□□ 0.14
KCNMA1-255ENST00000639282 HNRNPUQ00839 825 aaKnown RBP eCLIP15.89■□□□□ 0.13
KCNMA1-255ENST00000639282 SAMD9Q5K651 1589 aa15.88■□□□□ 0.13
KCNMA1-255ENST00000639282 HSPA5P11021 654 aaKnown RBP15.87■□□□□ 0.13
KCNMA1-255ENST00000639282 IRX6P78412 446 aaPredicted RBP15.87■□□□□ 0.13
KCNMA1-255ENST00000639282 FOXD1Q16676 465 aa15.87■□□□□ 0.13
KCNMA1-255ENST00000639282 KDM5BQ9UGL1 1544 aa15.87■□□□□ 0.13
KCNMA1-255ENST00000639282 MAGI3Q5TCQ9 1506 aa15.87■□□□□ 0.13
KCNMA1-255ENST00000639282 RBM19Q9Y4C8 960 aaKnown RBP15.86■□□□□ 0.13
KCNMA1-255ENST00000639282 WASHC2AQ641Q2 1341 aa15.86■□□□□ 0.13
KCNMA1-255ENST00000639282 PBRM1Q86U86 1689 aa15.85■□□□□ 0.13
KCNMA1-255ENST00000639282 SUPT6HQ7KZ85 1726 aaKnown RBP15.84■□□□□ 0.13
KCNMA1-255ENST00000639282 EHBP1L1Q8N3D4 1523 aa15.83■□□□□ 0.12
KCNMA1-255ENST00000639282 UGGT2Q9NYU1 1516 aa15.82■□□□□ 0.12
KCNMA1-255ENST00000639282 DENND4BO75064 1496 aaPredicted RBP15.82■□□□□ 0.12
KCNMA1-255ENST00000639282 CCDC184Q52MB2 194 aa15.81■□□□□ 0.12
KCNMA1-255ENST00000639282 KDM6BO15054 1643 aa15.8■□□□□ 0.12
KCNMA1-255ENST00000639282 L3MBTL2Q969R5 705 aa15.79■□□□□ 0.12
KCNMA1-255ENST00000639282 MPHOSPH9Q99550 1183 aa15.79■□□□□ 0.12
KCNMA1-255ENST00000639282 MAGI1Q96QZ7 1491 aaPredicted RBP15.79■□□□□ 0.12
KCNMA1-255ENST00000639282 C11orf95C9JLR9 678 aaPredicted RBP15.78■□□□□ 0.12
KCNMA1-255ENST00000639282 EIF4G2P78344 907 aaKnown RBP eCLIP15.78■□□□□ 0.12
KCNMA1-255ENST00000639282 ARHGEF11O15085 1522 aa15.78■□□□□ 0.12
KCNMA1-255ENST00000639282 CDK13Q14004 1512 aaKnown RBP15.77■□□□□ 0.11
KCNMA1-255ENST00000639282 EPRSP07814 1512 aaKnown RBP15.74■□□□□ 0.11
KCNMA1-255ENST00000639282 TCOF1Q13428 1488 aaKnown RBP15.74■□□□□ 0.11
KCNMA1-255ENST00000639282 ADAMTS12P58397 1594 aa15.73■□□□□ 0.11
KCNMA1-255ENST00000639282 FAM9BQ8IZU0 186 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms