RNA–Protein interactions for RNA: ENST00000639282.1

KCNMA1-255, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 2

Gene KCNMA1, Length 2,507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-255ENST00000639282 NISCHQ9Y2I1 1504 aa22.95■■□□□ 1.26
KCNMA1-255ENST00000639282 SHROOM4Q9ULL8 1493 aa19.99■□□□□ 0.79
KCNMA1-255ENST00000639282 CCDC180Q9P1Z9 1646 aa19.88■□□□□ 0.77
KCNMA1-255ENST00000639282 SUPT5HO00267 1087 aaKnown RBP19.68■□□□□ 0.74
KCNMA1-255ENST00000639282 ZCCHC6Q5VYS8 1495 aaKnown RBP19.43■□□□□ 0.7
KCNMA1-255ENST00000639282 DCAF8L2P0C7V8 631 aa19.29■□□□□ 0.68
KCNMA1-255ENST00000639282 CHIC1Q5VXU3 224 aa19.11■□□□□ 0.65
KCNMA1-255ENST00000639282 MYO15BQ96JP2 1530 aa19.11■□□□□ 0.65
KCNMA1-255ENST00000639282 ABCC9O60706 1549 aa19.09■□□□□ 0.65
KCNMA1-255ENST00000639282 HRCP23327 699 aa18.82■□□□□ 0.6
KCNMA1-255ENST00000639282 PCGF6Q9BYE7 350 aa18.81■□□□□ 0.6
KCNMA1-255ENST00000639282 DCAF1Q9Y4B6 1507 aa18.69■□□□□ 0.58
KCNMA1-255ENST00000639282 LOC105371045A0A1W2PR82 267 aa18.67■□□□□ 0.58
KCNMA1-255ENST00000639282 NACADO15069 1562 aa18.62■□□□□ 0.57
KCNMA1-255ENST00000639282 PPARGC1BQ86YN6 1023 aaKnown RBP18.57■□□□□ 0.56
KCNMA1-255ENST00000639282 RB1CC1Q8TDY2 1594 aa18.55■□□□□ 0.56
KCNMA1-255ENST00000639282 SCRIBQ14160 1630 aa18.32■□□□□ 0.52
KCNMA1-255ENST00000639282 RSF1Q96T23 1441 aaPredicted RBP18.3■□□□□ 0.52
KCNMA1-255ENST00000639282 TRIM26Q12899 539 aaPredicted RBP18.27■□□□□ 0.52
KCNMA1-255ENST00000639282 FAM9AQ8IZU1 332 aaPredicted RBP18.22■□□□□ 0.51
KCNMA1-255ENST00000639282 TRIM41Q8WV44 630 aa18.22■□□□□ 0.51
KCNMA1-255ENST00000639282 EHMT2Q96KQ7 1210 aa18.18■□□□□ 0.5
KCNMA1-255ENST00000639282 UNC13AQ9UPW8 1703 aa18.14■□□□□ 0.49
KCNMA1-255ENST00000639282 CECR2Q9BXF3 1484 aa18.01■□□□□ 0.47
KCNMA1-255ENST00000639282 BICRAQ9NZM4 1560 aa17.96■□□□□ 0.47
KCNMA1-255ENST00000639282 MROH2BQ7Z745 1585 aa17.92■□□□□ 0.46
KCNMA1-255ENST00000639282 PABPN1Q86U42 306 aaKnown RBP eCLIP17.9■□□□□ 0.46
KCNMA1-255ENST00000639282 ZEB1P37275 1124 aaPredicted RBP17.87■□□□□ 0.45
KCNMA1-255ENST00000639282 WIZO95785 1651 aa17.83■□□□□ 0.44
KCNMA1-255ENST00000639282 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.65■□□□□ 0.42
KCNMA1-255ENST00000639282 BAZ1AQ9NRL2 1556 aaPredicted RBP17.63■□□□□ 0.41
KCNMA1-255ENST00000639282 TTBK1Q5TCY1 1321 aaPredicted RBP17.62■□□□□ 0.41
KCNMA1-255ENST00000639282 EIF4G1Q04637 1599 aaKnown RBP17.56■□□□□ 0.4
KCNMA1-255ENST00000639282 ABCC8Q09428 1581 aa17.56■□□□□ 0.4
KCNMA1-255ENST00000639282 CCER1Q8TC90 406 aaPredicted RBP17.56■□□□□ 0.4
KCNMA1-255ENST00000639282 SCAF1Q9H7N4 1312 aaKnown RBP17.53■□□□□ 0.4
KCNMA1-255ENST00000639282 CCDC88BA6NC98 1476 aa17.53■□□□□ 0.4
KCNMA1-255ENST00000639282 TOP2AP11388 1531 aaKnown RBP17.46■□□□□ 0.39
KCNMA1-255ENST00000639282 SOGA1O94964 1423 aa17.45■□□□□ 0.38
KCNMA1-255ENST00000639282 SMARCA4P51532 1647 aa17.42■□□□□ 0.38
KCNMA1-255ENST00000639282 SMARCA2P51531 1590 aa17.41■□□□□ 0.38
KCNMA1-255ENST00000639282 CEP162Q5TB80 1403 aa17.41■□□□□ 0.38
KCNMA1-255ENST00000639282 UBTFP17480 764 aaKnown RBP17.37■□□□□ 0.37
KCNMA1-255ENST00000639282 RUSC2Q8N2Y8 1516 aa17.36■□□□□ 0.37
KCNMA1-255ENST00000639282 WRNQ14191 1432 aaPredicted RBP eCLIP17.34■□□□□ 0.37
KCNMA1-255ENST00000639282 CSRNP3Q8WYN3 585 aa17.34■□□□□ 0.37
KCNMA1-255ENST00000639282 CC2D2AQ9P2K1 1620 aa17.31■□□□□ 0.36
KCNMA1-255ENST00000639282 TNIKQ9UKE5 1360 aa17.31■□□□□ 0.36
KCNMA1-255ENST00000639282 DIEXFQ68CQ4 756 aaKnown RBP17.29■□□□□ 0.36
KCNMA1-255ENST00000639282 NEUROD1Q13562 356 aa17.27■□□□□ 0.36
KCNMA1-255ENST00000639282 ACIN1Q9UKV3 1341 aaKnown RBP17.24■□□□□ 0.35
KCNMA1-255ENST00000639282 PEG3Q9GZU2 1588 aa17.24■□□□□ 0.35
KCNMA1-255ENST00000639282 DNAJC5BQ9UF47 199 aa17.23■□□□□ 0.35
KCNMA1-255ENST00000639282 ATAD2BQ9ULI0 1458 aa17.22■□□□□ 0.35
KCNMA1-255ENST00000639282 EEA1Q15075 1411 aa17.2■□□□□ 0.34
KCNMA1-255ENST00000639282 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
KCNMA1-255ENST00000639282 GOLGA3Q08378 1498 aa17.17■□□□□ 0.34
KCNMA1-255ENST00000639282 PELP1Q8IZL8 1130 aaKnown RBP17.17■□□□□ 0.34
KCNMA1-255ENST00000639282 HNRNPUL2Q1KMD3 747 aaKnown RBP17.14■□□□□ 0.33
KCNMA1-255ENST00000639282 RANGAP1P46060 587 aaPredicted RBP17.13■□□□□ 0.33
KCNMA1-255ENST00000639282 HMGXB3Q12766 1538 aa17.11■□□□□ 0.33
KCNMA1-255ENST00000639282 GTF3C3Q9Y5Q9 886 aa17.11■□□□□ 0.33
KCNMA1-255ENST00000639282 BAZ1BQ9UIG0 1483 aaKnown RBP17.09■□□□□ 0.33
KCNMA1-255ENST00000639282 SYNJ1O43426 1573 aa17.08■□□□□ 0.33
KCNMA1-255ENST00000639282 CENPBP07199 599 aaPredicted RBP17.08■□□□□ 0.32
KCNMA1-255ENST00000639282 ZNF316A6NFI3 1004 aaPredicted RBP17.07■□□□□ 0.32
KCNMA1-255ENST00000639282 CEP164Q9UPV0 1460 aa17.04■□□□□ 0.32
KCNMA1-255ENST00000639282 CLIP1P30622 1438 aa17.04■□□□□ 0.32
KCNMA1-255ENST00000639282 YTHDC1Q96MU7 727 aaKnown RBP17.02■□□□□ 0.32
KCNMA1-255ENST00000639282 RAPGEF2Q9Y4G8 1499 aa16.98■□□□□ 0.31
KCNMA1-255ENST00000639282 APLP2Q06481 763 aa16.97■□□□□ 0.31
KCNMA1-255ENST00000639282 KIF21BO75037 1637 aa16.96■□□□□ 0.31
KCNMA1-255ENST00000639282 VPS8Q8N3P4 1428 aa16.95■□□□□ 0.3
KCNMA1-255ENST00000639282 MIER1Q8N108 512 aa16.93■□□□□ 0.3
KCNMA1-255ENST00000639282 TOP2BQ02880 1626 aa16.78■□□□□ 0.28
KCNMA1-255ENST00000639282 KANK4Q5T7N3 995 aaPredicted RBP16.78■□□□□ 0.28
KCNMA1-255ENST00000639282 ARAP1Q96P48 1450 aa16.72■□□□□ 0.27
KCNMA1-255ENST00000639282 PRXQ9BXM0 1461 aa16.71■□□□□ 0.27
KCNMA1-255ENST00000639282 DHX57Q6P158 1386 aaKnown RBP16.7■□□□□ 0.26
KCNMA1-255ENST00000639282 CADPSQ9ULU8 1353 aa16.69■□□□□ 0.26
KCNMA1-255ENST00000639282 BIVM-ERCC5R4GMW8 1640 aa16.68■□□□□ 0.26
KCNMA1-255ENST00000639282 LAMC3Q9Y6N6 1575 aa16.67■□□□□ 0.26
KCNMA1-255ENST00000639282 ITGAEP38570 1179 aa16.66■□□□□ 0.26
KCNMA1-255ENST00000639282 CFTRP13569 1480 aa16.66■□□□□ 0.26
KCNMA1-255ENST00000639282 ERICH3Q5RHP9 1530 aa16.65■□□□□ 0.26
KCNMA1-255ENST00000639282 CUX1P39880 1505 aa16.65■□□□□ 0.26
KCNMA1-255ENST00000639282 NESP48681 1621 aa16.62■□□□□ 0.25
KCNMA1-255ENST00000639282 KIF27Q86VH2 1401 aa16.61■□□□□ 0.25
KCNMA1-255ENST00000639282 CLSPNQ9HAW4 1339 aa16.59■□□□□ 0.25
KCNMA1-255ENST00000639282 MYT1Q01538 1121 aa16.59■□□□□ 0.25
KCNMA1-255ENST00000639282 PRDM2Q13029 1718 aa16.57■□□□□ 0.24
KCNMA1-255ENST00000639282 RRBP1Q9P2E9 1410 aaKnown RBP16.56■□□□□ 0.24
KCNMA1-255ENST00000639282 ARHGAP35Q9NRY4 1499 aa16.55■□□□□ 0.24
KCNMA1-255ENST00000639282 PDS5BQ9NTI5 1447 aa16.55■□□□□ 0.24
KCNMA1-255ENST00000639282 CCNB3Q8WWL7 1395 aa16.54■□□□□ 0.24
KCNMA1-255ENST00000639282 FANCD2Q9BXW9 1451 aa16.48■□□□□ 0.23
KCNMA1-255ENST00000639282 CUX2O14529 1486 aa16.46■□□□□ 0.23
KCNMA1-255ENST00000639282 IGF1RP08069 1367 aa16.45■□□□□ 0.22
KCNMA1-255ENST00000639282 KIF21AQ7Z4S6 1674 aa16.45■□□□□ 0.22
KCNMA1-255ENST00000639282 RAB3GAP2Q9H2M9 1393 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms