RNA–Protein interactions for RNA: ENST00000639071.1

NECAP1-215, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,578 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-215ENST00000639071 IGF1RP08069 1367 aa13.45□□□□□ -0.26
NECAP1-215ENST00000639071 TSHZ2Q9NRE2 1034 aa13.45□□□□□ -0.26
NECAP1-215ENST00000639071 PHLDB1Q86UU1 1377 aa13.45□□□□□ -0.26
NECAP1-215ENST00000639071 TIAM1Q13009 1591 aa13.43□□□□□ -0.26
NECAP1-215ENST00000639071 SETD5Q9C0A6 1442 aa13.43□□□□□ -0.26
NECAP1-215ENST00000639071 WDR97A6NE52 1622 aa13.43□□□□□ -0.26
NECAP1-215ENST00000639071 CARMIL1Q5VZK9 1371 aa13.42□□□□□ -0.26
NECAP1-215ENST00000639071 LRRC9Q6ZRR7 1453 aa13.4□□□□□ -0.26
NECAP1-215ENST00000639071 FKBP8Q14318 412 aa13.39□□□□□ -0.27
NECAP1-215ENST00000639071 TRIM52Q96A61 297 aa13.37□□□□□ -0.27
NECAP1-215ENST00000639071 FGD5Q6ZNL6 1462 aa13.37□□□□□ -0.27
NECAP1-215ENST00000639071 FHOD3Q2V2M9 1422 aa13.35□□□□□ -0.27
NECAP1-215ENST00000639071 PCF11O94913 1555 aaKnown RBP13.34□□□□□ -0.27
NECAP1-215ENST00000639071 PPP1R15AO75807 674 aaPredicted RBP13.32□□□□□ -0.28
NECAP1-215ENST00000639071 CADPSQ9ULU8 1353 aa13.31□□□□□ -0.28
NECAP1-215ENST00000639071 MAP3K1Q13233 1512 aa13.31□□□□□ -0.28
NECAP1-215ENST00000639071 FHAD1B1AJZ9 1412 aa13.3□□□□□ -0.28
NECAP1-215ENST00000639071 ANP32CO43423 234 aa13.28□□□□□ -0.28
NECAP1-215ENST00000639071 RAD54L2Q9Y4B4 1467 aa13.28□□□□□ -0.28
NECAP1-215ENST00000639071 PRDM2Q13029 1718 aa13.27□□□□□ -0.28
NECAP1-215ENST00000639071 CFAP43Q8NDM7 1665 aa13.27□□□□□ -0.29
NECAP1-215ENST00000639071 NEFLP07196 543 aa13.26□□□□□ -0.29
NECAP1-215ENST00000639071 CC2D2AQ9P2K1 1620 aa13.26□□□□□ -0.29
NECAP1-215ENST00000639071 TONSLQ96HA7 1378 aa13.25□□□□□ -0.29
NECAP1-215ENST00000639071 ANP32EQ9BTT0 268 aa13.25□□□□□ -0.29
NECAP1-215ENST00000639071 FANCD2Q9BXW9 1451 aa13.21□□□□□ -0.3
NECAP1-215ENST00000639071 TIMELESSQ9UNS1 1208 aa13.2□□□□□ -0.3
NECAP1-215ENST00000639071 FYCO1Q9BQS8 1478 aa13.2□□□□□ -0.3
NECAP1-215ENST00000639071 IRX6P78412 446 aaPredicted RBP13.2□□□□□ -0.3
NECAP1-215ENST00000639071 MTUS2Q5JR59 1369 aa13.2□□□□□ -0.3
NECAP1-215ENST00000639071 CCDC18Q5T9S5 1454 aa13.2□□□□□ -0.3
NECAP1-215ENST00000639071 PTPRKQ15262 1439 aa13.19□□□□□ -0.3
NECAP1-215ENST00000639071 FGD6Q6ZV73 1430 aa13.19□□□□□ -0.3
NECAP1-215ENST00000639071 CCER2I3L3R5 266 aa13.19□□□□□ -0.3
NECAP1-215ENST00000639071 CASKIN1Q8WXD9 1431 aa13.19□□□□□ -0.3
NECAP1-215ENST00000639071 RBM19Q9Y4C8 960 aaKnown RBP13.18□□□□□ -0.3
NECAP1-215ENST00000639071 CHIC2Q9UKJ5 165 aa13.17□□□□□ -0.3
NECAP1-215ENST00000639071 POLA1P09884 1462 aaPredicted RBP13.16□□□□□ -0.3
NECAP1-215ENST00000639071 HNRNPUQ00839 825 aaKnown RBP eCLIP13.16□□□□□ -0.3
NECAP1-215ENST00000639071 NESP48681 1621 aa13.15□□□□□ -0.3
NECAP1-215ENST00000639071 RRP7BPQ9NSQ0 103 aa13.15□□□□□ -0.3
NECAP1-215ENST00000639071 AQRO60306 1485 aaKnown RBP eCLIP13.14□□□□□ -0.316e-7■■■■■ 30.6
NECAP1-215ENST00000639071 EFCAB5A4FU69 1503 aa13.13□□□□□ -0.31
NECAP1-215ENST00000639071 ARID3CA6NKF2 412 aa13.13□□□□□ -0.31
NECAP1-215ENST00000639071 TOPBP1Q92547 1522 aa13.13□□□□□ -0.31
NECAP1-215ENST00000639071 ABCA10Q8WWZ4 1543 aa13.12□□□□□ -0.31
NECAP1-215ENST00000639071 FMN1Q68DA7 1419 aa13.12□□□□□ -0.31
NECAP1-215ENST00000639071 UACAQ9BZF9 1416 aa13.12□□□□□ -0.31
NECAP1-215ENST00000639071 TDRD9Q8NDG6 1382 aaKnown RBP13.12□□□□□ -0.31
NECAP1-215ENST00000639071 PTPN23Q9H3S7 1636 aa13.12□□□□□ -0.31
NECAP1-215ENST00000639071 HFM1A2PYH4 1435 aa13.11□□□□□ -0.31
NECAP1-215ENST00000639071 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.11□□□□□ -0.31
NECAP1-215ENST00000639071 DNMBPQ6XZF7 1577 aa13.11□□□□□ -0.31
NECAP1-215ENST00000639071 SNAPC4Q5SXM2 1469 aa13.11□□□□□ -0.31
NECAP1-215ENST00000639071 CTTNBP2Q8WZ74 1663 aa13.11□□□□□ -0.31
NECAP1-215ENST00000639071 NAIPQ13075 1403 aa13.1□□□□□ -0.31
NECAP1-215ENST00000639071 NCOA2Q15596 1464 aa13.1□□□□□ -0.31
NECAP1-215ENST00000639071 LRRIQ1Q96JM4 1722 aa13.09□□□□□ -0.31
NECAP1-215ENST00000639071 HSPA5P11021 654 aaKnown RBP13.09□□□□□ -0.31
NECAP1-215ENST00000639071 FOXD1Q16676 465 aa13.09□□□□□ -0.31
NECAP1-215ENST00000639071 WASHC2AQ641Q2 1341 aa13.07□□□□□ -0.32
NECAP1-215ENST00000639071 MYOM3Q5VTT5 1437 aa13.07□□□□□ -0.32
NECAP1-215ENST00000639071 CCDC184Q52MB2 194 aa13.07□□□□□ -0.32
NECAP1-215ENST00000639071 CUL7Q14999 1698 aa13.06□□□□□ -0.32
NECAP1-215ENST00000639071 CNGB1Q14028 1251 aaPredicted RBP13.05□□□□□ -0.32
NECAP1-215ENST00000639071 KDM5BQ9UGL1 1544 aa13.04□□□□□ -0.32
NECAP1-215ENST00000639071 MSH5O43196 834 aa13.03□□□□□ -0.32
NECAP1-215ENST00000639071 FAM9BQ8IZU0 186 aa13.03□□□□□ -0.32
NECAP1-215ENST00000639071 GRIN2BQ13224 1484 aa13.02□□□□□ -0.33
NECAP1-215ENST00000639071 MAGI3Q5TCQ9 1506 aa13.02□□□□□ -0.33
NECAP1-215ENST00000639071 SUPT6HQ7KZ85 1726 aaKnown RBP13.01□□□□□ -0.33
NECAP1-215ENST00000639071 C11orf95C9JLR9 678 aaPredicted RBP13.01□□□□□ -0.33
NECAP1-215ENST00000639071 URB2Q14146 1524 aaKnown RBP13.01□□□□□ -0.33
NECAP1-215ENST00000639071 EIF4G2P78344 907 aaKnown RBP eCLIP13.01□□□□□ -0.33
NECAP1-215ENST00000639071 KDM6BO15054 1643 aa13□□□□□ -0.33
NECAP1-215ENST00000639071 LAMC3Q9Y6N6 1575 aa13□□□□□ -0.33
NECAP1-215ENST00000639071 L3MBTL2Q969R5 705 aa13□□□□□ -0.33
NECAP1-215ENST00000639071 SAMD9Q5K651 1589 aa13□□□□□ -0.33
NECAP1-215ENST00000639071 DENND4BO75064 1496 aaPredicted RBP12.99□□□□□ -0.33
NECAP1-215ENST00000639071 GAPVD1Q14C86 1478 aa12.99□□□□□ -0.33
NECAP1-215ENST00000639071 MPHOSPH9Q99550 1183 aa12.99□□□□□ -0.33
NECAP1-215ENST00000639071 CDK11AQ9UQ88 783 aaPredicted RBP12.99□□□□□ -0.33
NECAP1-215ENST00000639071 EHBP1L1Q8N3D4 1523 aa12.98□□□□□ -0.33
NECAP1-215ENST00000639071 SENP3-EIF4A1A0A087X0R7 540 aa12.97□□□□□ -0.33
NECAP1-215ENST00000639071 UGGT2Q9NYU1 1516 aa12.97□□□□□ -0.33
NECAP1-215ENST00000639071 BCL11AQ9H165 835 aa12.96□□□□□ -0.33
NECAP1-215ENST00000639071 MRS2Q9HD23 443 aa12.96□□□□□ -0.33
NECAP1-215ENST00000639071 DNAJC5BQ9UF47 199 aa12.95□□□□□ -0.34
NECAP1-215ENST00000639071 B4GALNT3Q6L9W6 998 aa12.94□□□□□ -0.34
NECAP1-215ENST00000639071 ABCA5Q8WWZ7 1642 aa12.94□□□□□ -0.34
NECAP1-215ENST00000639071 CDK13Q14004 1512 aaKnown RBP12.94□□□□□ -0.34
NECAP1-215ENST00000639071 CNTLNQ9NXG0 1405 aa12.94□□□□□ -0.34
NECAP1-215ENST00000639071 NBPF8Q3BBV2 869 aa12.94□□□□□ -0.34
NECAP1-215ENST00000639071 POLR3GLQ9BT43 218 aa12.94□□□□□ -0.34
NECAP1-215ENST00000639071 PRKRIP1Q9H875 184 aaPredicted RBP12.93□□□□□ -0.34
NECAP1-215ENST00000639071 ERICH6Q7L0X2 663 aa12.92□□□□□ -0.34
NECAP1-215ENST00000639071 CCDC7Q96M83 1385 aa12.92□□□□□ -0.34
NECAP1-215ENST00000639071 ZNF644Q9H582 1327 aaPredicted RBP12.91□□□□□ -0.34
NECAP1-215ENST00000639071 HECW1Q76N89 1606 aa12.91□□□□□ -0.34
NECAP1-215ENST00000639071 ARHGEF11O15085 1522 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms