RNA–Protein interactions for RNA: ENST00000639041.1

CCDC7-212, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC7, Length 482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-212ENST00000639041 FAM212AQ96EL1 285 aa17.45■□□□□ 0.38
CCDC7-212ENST00000639041 CFAP44Q96MT7 982 aa17.45■□□□□ 0.38
CCDC7-212ENST00000639041 CHADLQ6NUI6 762 aa17.43■□□□□ 0.38
CCDC7-212ENST00000639041 RNF25Q96BH1 459 aaPredicted RBP17.43■□□□□ 0.38
CCDC7-212ENST00000639041 RIOK3O14730 519 aaKnown RBP17.31■□□□□ 0.36
CCDC7-212ENST00000639041 SPRYD3Q8NCJ5 442 aa17.3■□□□□ 0.36
CCDC7-212ENST00000639041 PYGBP11216 843 aa17.28■□□□□ 0.36
CCDC7-212ENST00000639041 HS6ST3Q8IZP7 471 aa17.28■□□□□ 0.36
CCDC7-212ENST00000639041 VSIG10Q8N0Z9 540 aa17.23■□□□□ 0.35
CCDC7-212ENST00000639041 TSPYL2Q9H2G4 693 aaPredicted RBP17.23■□□□□ 0.35
CCDC7-212ENST00000639041 FARP1Q9Y4F1 1045 aaPredicted RBP17.23■□□□□ 0.35
CCDC7-212ENST00000639041 CHRM1P11229 460 aaPredicted RBP17.22■□□□□ 0.35
CCDC7-212ENST00000639041 PRKAR2AP13861 404 aaKnown RBP17.22■□□□□ 0.35
CCDC7-212ENST00000639041 POTEHQ6S545 545 aa17.22■□□□□ 0.35
CCDC7-212ENST00000639041 TAOK2Q9UL54 1235 aa17.2■□□□□ 0.34
CCDC7-212ENST00000639041 STK25O00506 426 aa17.17■□□□□ 0.34
CCDC7-212ENST00000639041 TSHZ2Q9NRE2 1034 aa17.17■□□□□ 0.34
CCDC7-212ENST00000639041 VGFO15240 615 aaPredicted RBP17.16■□□□□ 0.34
CCDC7-212ENST00000639041 KDM2AQ9Y2K7 1162 aa17.16■□□□□ 0.34
CCDC7-212ENST00000639041 FXR2P51116 673 aaKnown RBP eCLIP17.13■□□□□ 0.33
CCDC7-212ENST00000639041 CHRDL2Q6WN34 429 aa17.11■□□□□ 0.33
CCDC7-212ENST00000639041 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.1■□□□□ 0.33
CCDC7-212ENST00000639041 NKX1-1Q15270 411 aaPredicted RBP17.1■□□□□ 0.33
CCDC7-212ENST00000639041 ZFP91Q96JP5 570 aaPredicted RBP17.1■□□□□ 0.33
CCDC7-212ENST00000639041 STK24Q9Y6E0 443 aa17.07■□□□□ 0.32
CCDC7-212ENST00000639041 BCL11BQ9C0K0 894 aaPredicted RBP17.06■□□□□ 0.32
CCDC7-212ENST00000639041 DNAJC5Q9H3Z4 198 aa17.05■□□□□ 0.32
CCDC7-212ENST00000639041 PIP4P2Q8N4L2 257 aa17.02■□□□□ 0.32
CCDC7-212ENST00000639041 SGIP1Q9BQI5 828 aa16.99■□□□□ 0.31
CCDC7-212ENST00000639041 GTPBP6O43824 516 aaPredicted RBP16.98■□□□□ 0.31
CCDC7-212ENST00000639041 PCDHB8Q9UN66 801 aa16.98■□□□□ 0.31
CCDC7-212ENST00000639041 PCDHB13Q9Y5F0 798 aa16.98■□□□□ 0.31
CCDC7-212ENST00000639041 CCDC61Q9Y6R9 512 aa16.96■□□□□ 0.31
CCDC7-212ENST00000639041 ZNF467Q7Z7K2 595 aaPredicted RBP16.94■□□□□ 0.3
CCDC7-212ENST00000639041 BCANQ96GW7 911 aa16.93■□□□□ 0.3
CCDC7-212ENST00000639041 PAK3O75914 559 aaPredicted RBP16.91■□□□□ 0.3
CCDC7-212ENST00000639041 PDAP1Q13442 181 aaKnown RBP16.85■□□□□ 0.29
CCDC7-212ENST00000639041 MAP3K13O43283 966 aa16.81■□□□□ 0.28
CCDC7-212ENST00000639041 PSEN1P49768 467 aa16.81■□□□□ 0.28
CCDC7-212ENST00000639041 ZNF579Q8NAF0 562 aaKnown RBP16.81■□□□□ 0.28
CCDC7-212ENST00000639041 IFNL1Q8IU54 200 aa16.79■□□□□ 0.28
CCDC7-212ENST00000639041 ZRANB1Q9UGI0 708 aa16.78■□□□□ 0.28
CCDC7-212ENST00000639041 KIF12Q96FN5 646 aa16.77■□□□□ 0.28
CCDC7-212ENST00000639041 CD44P16070 742 aaKnown RBP16.76■□□□□ 0.27
CCDC7-212ENST00000639041 RYDENQ9NUL5 291 aaKnown RBP16.75■□□□□ 0.27
CCDC7-212ENST00000639041 PHF12Q96QT6 1004 aa16.71■□□□□ 0.27
CCDC7-212ENST00000639041 PRKCSHP14314 528 aaPredicted RBP16.64■□□□□ 0.25
CCDC7-212ENST00000639041 CABP2Q9NPB3 220 aa16.64■□□□□ 0.25
CCDC7-212ENST00000639041 MFRPQ9BY79 579 aa16.63■□□□□ 0.25
CCDC7-212ENST00000639041 EFCAB3Q8N7B9 438 aa16.61■□□□□ 0.25
CCDC7-212ENST00000639041 NBR1Q14596 966 aa16.55■□□□□ 0.24
CCDC7-212ENST00000639041 CADPS2Q86UW7 1296 aa16.55■□□□□ 0.24
CCDC7-212ENST00000639041 PHF8Q9UPP1 1060 aa16.53■□□□□ 0.24
CCDC7-212ENST00000639041 C19orf67A6NJJ6 358 aa16.52■□□□□ 0.24
CCDC7-212ENST00000639041 PPP1R37O75864 691 aa16.51■□□□□ 0.23
CCDC7-212ENST00000639041 MS4A3Q96HJ5 214 aa16.5■□□□□ 0.23
CCDC7-212ENST00000639041 TRPC6Q9Y210 931 aa16.5■□□□□ 0.23
CCDC7-212ENST00000639041 TPRNQ4KMQ1 711 aa16.49■□□□□ 0.23
CCDC7-212ENST00000639041 NLRP6P59044 892 aa16.48■□□□□ 0.23
CCDC7-212ENST00000639041 SOX12O15370 315 aa16.47■□□□□ 0.23
CCDC7-212ENST00000639041 FBXO22Q8NEZ5 403 aa16.47■□□□□ 0.23
CCDC7-212ENST00000639041 TMEM106CQ9BVX2 250 aa16.47■□□□□ 0.23
CCDC7-212ENST00000639041 HAX1O00165 279 aa16.43■□□□□ 0.22
CCDC7-212ENST00000639041 GOLGA2Q08379 1002 aa16.42■□□□□ 0.22
CCDC7-212ENST00000639041 WDR70Q9NW82 654 aa16.41■□□□□ 0.22
CCDC7-212ENST00000639041 MS4A4AQ96JQ5 239 aa16.34■□□□□ 0.21
CCDC7-212ENST00000639041 MKRN3Q13064 507 aaKnown RBP16.32■□□□□ 0.2
CCDC7-212ENST00000639041 GALR2O43603 387 aaPredicted RBP16.29■□□□□ 0.2
CCDC7-212ENST00000639041 EVX2Q03828 476 aa16.29■□□□□ 0.2
CCDC7-212ENST00000639041 SP7Q8TDD2 431 aaPredicted RBP16.29■□□□□ 0.2
CCDC7-212ENST00000639041 TTLL13PA6NNM8 815 aa16.28■□□□□ 0.2
CCDC7-212ENST00000639041 P3H3Q8IVL6 736 aa16.28■□□□□ 0.2
CCDC7-212ENST00000639041 KCNV2Q8TDN2 545 aa16.28■□□□□ 0.2
CCDC7-212ENST00000639041 TIE1P35590 1138 aa16.26■□□□□ 0.19
CCDC7-212ENST00000639041 BMP2KQ9NSY1 1161 aaPredicted RBP16.26■□□□□ 0.19
CCDC7-212ENST00000639041 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.19■□□□□ 0.18
CCDC7-212ENST00000639041 TRIM35Q9UPQ4 493 aa16.19■□□□□ 0.18
CCDC7-212ENST00000639041 NCKAP5LQ9HCH0 1330 aa16.18■□□□□ 0.18
CCDC7-212ENST00000639041 LARP6Q9BRS8 491 aaKnown RBP16.17■□□□□ 0.18
CCDC7-212ENST00000639041 E2F4Q16254 413 aa16.13■□□□□ 0.17
CCDC7-212ENST00000639041 PDE4AP27815 886 aa16.12■□□□□ 0.17
CCDC7-212ENST00000639041 DPY19L2Q6NUT2 758 aa16.09■□□□□ 0.17
CCDC7-212ENST00000639041 ATN1P54259 1190 aaPredicted RBP16.08■□□□□ 0.16
CCDC7-212ENST00000639041 CRISPLD2Q9H0B8 497 aa16.07■□□□□ 0.16
CCDC7-212ENST00000639041 ILDR1Q86SU0 546 aaPredicted RBP16.06■□□□□ 0.16
CCDC7-212ENST00000639041 ARHGEF1Q92888 912 aaKnown RBP16.05■□□□□ 0.16
CCDC7-212ENST00000639041 DDX27Q96GQ7 796 aaKnown RBP16.04■□□□□ 0.16
CCDC7-212ENST00000639041 CLCN6P51797 869 aa16.03■□□□□ 0.16
CCDC7-212ENST00000639041 ATMINO43313 823 aaPredicted RBP16.02■□□□□ 0.16
CCDC7-212ENST00000639041 MFSD10Q14728 455 aa16.02■□□□□ 0.16
CCDC7-212ENST00000639041 PDCD7Q8N8D1 485 aaKnown RBP15.97■□□□□ 0.15
CCDC7-212ENST00000639041 SEMA3EO15041 775 aa15.96■□□□□ 0.15
CCDC7-212ENST00000639041 ASTLQ6HA08 431 aaPredicted RBP15.96■□□□□ 0.15
CCDC7-212ENST00000639041 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.96■□□□□ 0.15
CCDC7-212ENST00000639041 LMOD2Q6P5Q4 547 aa15.95■□□□□ 0.14
CCDC7-212ENST00000639041 MICALL2Q8IY33 904 aa15.95■□□□□ 0.14
CCDC7-212ENST00000639041 GABBR2O75899 941 aa15.94■□□□□ 0.14
CCDC7-212ENST00000639041 IRX5P78411 483 aaPredicted RBP15.93■□□□□ 0.14
CCDC7-212ENST00000639041 OCEL1Q9H607 264 aa15.92■□□□□ 0.14
CCDC7-212ENST00000639041 PPP1R15BQ5SWA1 713 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms