RNA–Protein interactions for RNA: ENST00000639041.1

CCDC7-212, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC7, Length 482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-212ENST00000639041 AEBP2Q6ZN18 517 aaPredicted RBP32.22■■■□□ 2.75
CCDC7-212ENST00000639041 CHIC1Q5VXU3 224 aa32.01■■■□□ 2.71
CCDC7-212ENST00000639041 PHF23Q9BUL5 403 aaPredicted RBP28.29■■■□□ 2.12
CCDC7-212ENST00000639041 SENP3Q9H4L4 574 aaPredicted RBP27.12■■□□□ 1.93
CCDC7-212ENST00000639041 PLPPR3Q6T4P5 718 aa26.26■■□□□ 1.79
CCDC7-212ENST00000639041 FOXD1Q16676 465 aa25.19■■□□□ 1.62
CCDC7-212ENST00000639041 ADRA2BP18089 450 aa24.83■■□□□ 1.57
CCDC7-212ENST00000639041 PPP6R1Q9UPN7 881 aa24.79■■□□□ 1.56
CCDC7-212ENST00000639041 PIAS4Q8N2W9 510 aaPredicted RBP23.92■■□□□ 1.42
CCDC7-212ENST00000639041 KCNA4P22459 653 aa23.52■■□□□ 1.36
CCDC7-212ENST00000639041 PPP4R3CPQ6ZMV5 832 aa23.28■■□□□ 1.32
CCDC7-212ENST00000639041 MSH5O43196 834 aa22.96■■□□□ 1.27
CCDC7-212ENST00000639041 NCBP3Q53F19 620 aaKnown RBP22.79■■□□□ 1.24
CCDC7-212ENST00000639041 EHMT2Q96KQ7 1210 aa22.69■■□□□ 1.22
CCDC7-212ENST00000639041 SCAF1Q9H7N4 1312 aaKnown RBP22.57■■□□□ 1.2
CCDC7-212ENST00000639041 NPM3O75607 178 aaKnown RBP22.52■■□□□ 1.2
CCDC7-212ENST00000639041 SLC4A1APQ9BWU0 796 aaKnown RBP22.48■■□□□ 1.19
CCDC7-212ENST00000639041 CNKSR2Q8WXI2 1034 aa22.42■■□□□ 1.18
CCDC7-212ENST00000639041 MAPK8IP2Q13387 824 aaPredicted RBP22.37■■□□□ 1.17
CCDC7-212ENST00000639041 CSRNP3Q8WYN3 585 aa22.04■■□□□ 1.12
CCDC7-212ENST00000639041 POTEDQ86YR6 584 aa21.86■■□□□ 1.09
CCDC7-212ENST00000639041 RNF216Q9NWF9 866 aaPredicted RBP21.81■■□□□ 1.08
CCDC7-212ENST00000639041 DMRT2Q9Y5R5 561 aa21.76■■□□□ 1.07
CCDC7-212ENST00000639041 ZBTB22O15209 634 aa21.66■■□□□ 1.06
CCDC7-212ENST00000639041 HOXD11P31277 338 aaPredicted RBP21.54■■□□□ 1.04
CCDC7-212ENST00000639041 DNAJC5BQ9UF47 199 aa21.54■■□□□ 1.04
CCDC7-212ENST00000639041 FOXD4L1Q9NU39 408 aa21.38■■□□□ 1.01
CCDC7-212ENST00000639041 SLC4A2P04920 1241 aa21.12■□□□□ 0.97
CCDC7-212ENST00000639041 DCAF8L1A6NGE4 600 aa20.96■□□□□ 0.95
CCDC7-212ENST00000639041 MYCNP04198 464 aaPredicted RBP20.74■□□□□ 0.91
CCDC7-212ENST00000639041 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.64■□□□□ 0.89
CCDC7-212ENST00000639041 ATXN8OSP0DMR3 200 aa20.49■□□□□ 0.87
CCDC7-212ENST00000639041 U3KPZ7 1027 aaPredicted RBP20.35■□□□□ 0.85
CCDC7-212ENST00000639041 ATF5Q9Y2D1 282 aaPredicted RBP20.27■□□□□ 0.84
CCDC7-212ENST00000639041 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.2■□□□□ 0.82
CCDC7-212ENST00000639041 HNRNPUL2Q1KMD3 747 aaKnown RBP20.2■□□□□ 0.82
CCDC7-212ENST00000639041 SAMD1Q6SPF0 538 aaPredicted RBP20.19■□□□□ 0.82
CCDC7-212ENST00000639041 FKBP8Q14318 412 aa19.92■□□□□ 0.78
CCDC7-212ENST00000639041 APLP2Q06481 763 aa19.81■□□□□ 0.76
CCDC7-212ENST00000639041 ZNF219Q9P2Y4 722 aaPredicted RBP19.81■□□□□ 0.76
CCDC7-212ENST00000639041 RNF39Q9H2S5 420 aa19.69■□□□□ 0.74
CCDC7-212ENST00000639041 SPINK5Q9NQ38 1064 aaPredicted RBP19.66■□□□□ 0.74
CCDC7-212ENST00000639041 TRHP20396 242 aaPredicted RBP19.63■□□□□ 0.73
CCDC7-212ENST00000639041 CACNB1Q02641 598 aaPredicted RBP19.56■□□□□ 0.72
CCDC7-212ENST00000639041 CAPN15O75808 1086 aa19.54■□□□□ 0.72
CCDC7-212ENST00000639041 C1QBPQ07021 282 aaKnown RBP19.45■□□□□ 0.7
CCDC7-212ENST00000639041 POLA2Q14181 598 aa19.41■□□□□ 0.7
CCDC7-212ENST00000639041 MKRN4PQ13434 485 aaPredicted RBP19.38■□□□□ 0.69
CCDC7-212ENST00000639041 ABCB7O75027 752 aa19.28■□□□□ 0.68
CCDC7-212ENST00000639041 FBLN2P98095 1184 aa19.27■□□□□ 0.68
CCDC7-212ENST00000639041 RTN4Q9NQC3 1192 aaKnown RBP19.27■□□□□ 0.68
CCDC7-212ENST00000639041 SPDYE4A6NLX3 237 aa19.24■□□□□ 0.67
CCDC7-212ENST00000639041 AMER1Q5JTC6 1135 aaPredicted RBP19.17■□□□□ 0.66
CCDC7-212ENST00000639041 DSG3P32926 999 aa19■□□□□ 0.63
CCDC7-212ENST00000639041 ZBTB12Q9Y330 459 aaPredicted RBP18.99■□□□□ 0.63
CCDC7-212ENST00000639041 FBXO3Q9UK99 471 aa18.91■□□□□ 0.62
CCDC7-212ENST00000639041 PROM2Q8N271 834 aa18.9■□□□□ 0.62
CCDC7-212ENST00000639041 OSCARQ8IYS5 282 aa18.73■□□□□ 0.59
CCDC7-212ENST00000639041 VASPP50552 380 aaPredicted RBP18.7■□□□□ 0.58
CCDC7-212ENST00000639041 ZNF692Q9BU19 519 aaPredicted RBP18.69■□□□□ 0.58
CCDC7-212ENST00000639041 SPDYE2BA6NHP3 402 aa18.57■□□□□ 0.56
CCDC7-212ENST00000639041 SPDYE6P0CI01 402 aa18.57■□□□□ 0.56
CCDC7-212ENST00000639041 SPDYE2Q495Y8 402 aa18.57■□□□□ 0.56
CCDC7-212ENST00000639041 IFNLR1Q8IU57 520 aaPredicted RBP18.53■□□□□ 0.56
CCDC7-212ENST00000639041 SSUH2Q9Y2M2 353 aa18.5■□□□□ 0.55
CCDC7-212ENST00000639041 PABPN1Q86U42 306 aaKnown RBP eCLIP18.48■□□□□ 0.55
CCDC7-212ENST00000639041 SLC24A1O60721 1099 aa18.41■□□□□ 0.54
CCDC7-212ENST00000639041 KLHL34Q8N239 644 aa18.31■□□□□ 0.52
CCDC7-212ENST00000639041 STAG3Q9UJ98 1225 aa18.31■□□□□ 0.52
CCDC7-212ENST00000639041 PLCD3Q8N3E9 789 aa18.25■□□□□ 0.51
CCDC7-212ENST00000639041 MIER1Q8N108 512 aa18.21■□□□□ 0.51
CCDC7-212ENST00000639041 SPOCK2Q92563 424 aa18.16■□□□□ 0.5
CCDC7-212ENST00000639041 PKD2Q13563 968 aa18.15■□□□□ 0.5
CCDC7-212ENST00000639041 DCAF8L2P0C7V8 631 aa18.12■□□□□ 0.49
CCDC7-212ENST00000639041 RBM42Q9BTD8 480 aaKnown RBP18■□□□□ 0.47
CCDC7-212ENST00000639041 PLEKHG5O94827 1062 aa17.98■□□□□ 0.47
CCDC7-212ENST00000639041 AKT1S1Q96B36 256 aa17.95■□□□□ 0.46
CCDC7-212ENST00000639041 ECM2O94769 699 aaPredicted RBP17.93■□□□□ 0.46
CCDC7-212ENST00000639041 CLEC11AQ9Y240 323 aa17.91■□□□□ 0.46
CCDC7-212ENST00000639041 SPDYE1Q8NFV5 336 aaPredicted RBP17.9■□□□□ 0.46
CCDC7-212ENST00000639041 ZBTB47Q9UFB7 747 aaPredicted RBP17.87■□□□□ 0.45
CCDC7-212ENST00000639041 CIZ1Q9ULV3 898 aaPredicted RBP17.86■□□□□ 0.45
CCDC7-212ENST00000639041 REM2Q8IYK8 340 aaPredicted RBP17.84■□□□□ 0.45
CCDC7-212ENST00000639041 PRR29P0C7W0 189 aa17.77■□□□□ 0.44
CCDC7-212ENST00000639041 PLCB2Q00722 1185 aa17.77■□□□□ 0.44
CCDC7-212ENST00000639041 RGL2O15211 777 aa17.76■□□□□ 0.43
CCDC7-212ENST00000639041 CREBZFQ9NS37 354 aa17.69■□□□□ 0.42
CCDC7-212ENST00000639041 NPM1P06748 294 aaKnown RBP eCLIP17.65■□□□□ 0.42
CCDC7-212ENST00000639041 PITPNM1O00562 1244 aa17.64■□□□□ 0.41
CCDC7-212ENST00000639041 NUBP1P53384 320 aa17.62■□□□□ 0.41
CCDC7-212ENST00000639041 HAP1P54257 671 aaPredicted RBP17.61■□□□□ 0.41
CCDC7-212ENST00000639041 DCAF8Q5TAQ9 597 aa17.59■□□□□ 0.41
CCDC7-212ENST00000639041 MNX1P50219 401 aaPredicted RBP17.56■□□□□ 0.4
CCDC7-212ENST00000639041 GSE1Q14687 1217 aa17.56■□□□□ 0.4
CCDC7-212ENST00000639041 BBXQ8WY36 941 aaPredicted RBP17.54■□□□□ 0.4
CCDC7-212ENST00000639041 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.52■□□□□ 0.4
CCDC7-212ENST00000639041 TRIM41Q8WV44 630 aa17.51■□□□□ 0.39
CCDC7-212ENST00000639041 CHGAP10645 457 aaKnown RBP17.5■□□□□ 0.39
CCDC7-212ENST00000639041 PAXIP1Q6ZW49 1069 aaPredicted RBP17.46■□□□□ 0.39
CCDC7-212ENST00000639041 RASEFQ8IZ41 740 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 177.1 ms