RNA–Protein interactions for RNA: ENST00000638848.1

KCNMA1-246, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-246ENST00000638848 ERICH6Q7L0X2 663 aa16.05■□□□□ 0.16
KCNMA1-246ENST00000638848 CHIC2Q9UKJ5 165 aa16.01■□□□□ 0.15
KCNMA1-246ENST00000638848 CLSPNQ9HAW4 1339 aa15.99■□□□□ 0.15
KCNMA1-246ENST00000638848 ATAD2BQ9ULI0 1458 aa15.98■□□□□ 0.15
KCNMA1-246ENST00000638848 FAM9BQ8IZU0 186 aa15.97■□□□□ 0.15
KCNMA1-246ENST00000638848 WDR97A6NE52 1622 aa15.93■□□□□ 0.14
KCNMA1-246ENST00000638848 PHLDB1Q86UU1 1377 aa15.93■□□□□ 0.14
KCNMA1-246ENST00000638848 MSH5O43196 834 aa15.92■□□□□ 0.14
KCNMA1-246ENST00000638848 PPP1R15AO75807 674 aaPredicted RBP15.92■□□□□ 0.14
KCNMA1-246ENST00000638848 FOXD1Q16676 465 aa15.92■□□□□ 0.14
KCNMA1-246ENST00000638848 RRP7BPQ9NSQ0 103 aa15.92■□□□□ 0.14
KCNMA1-246ENST00000638848 TONSLQ96HA7 1378 aa15.91■□□□□ 0.14
KCNMA1-246ENST00000638848 KIF27Q86VH2 1401 aa15.9■□□□□ 0.14
KCNMA1-246ENST00000638848 SETD5Q9C0A6 1442 aa15.9■□□□□ 0.14
KCNMA1-246ENST00000638848 B4GALNT3Q6L9W6 998 aa15.89■□□□□ 0.13
KCNMA1-246ENST00000638848 ARHGAP35Q9NRY4 1499 aa15.89■□□□□ 0.13
KCNMA1-246ENST00000638848 NBR1Q14596 966 aa15.88■□□□□ 0.13
KCNMA1-246ENST00000638848 CDK11AQ9UQ88 783 aaPredicted RBP15.87■□□□□ 0.13
KCNMA1-246ENST00000638848 CCDC184Q52MB2 194 aa15.87■□□□□ 0.13
KCNMA1-246ENST00000638848 RRBP1Q9P2E9 1410 aaKnown RBP15.87■□□□□ 0.13
KCNMA1-246ENST00000638848 ZNF326Q5BKZ1 582 aaKnown RBP15.86■□□□□ 0.13
KCNMA1-246ENST00000638848 CUX2O14529 1486 aa15.86■□□□□ 0.13
KCNMA1-246ENST00000638848 PRXQ9BXM0 1461 aa15.85■□□□□ 0.13
KCNMA1-246ENST00000638848 MAPKBP1O60336 1514 aa15.83■□□□□ 0.13
KCNMA1-246ENST00000638848 PEG3Q9GZU2 1588 aa15.82■□□□□ 0.12
KCNMA1-246ENST00000638848 FHOD3Q2V2M9 1422 aa15.81■□□□□ 0.12
KCNMA1-246ENST00000638848 CARMIL1Q5VZK9 1371 aa15.79■□□□□ 0.12
KCNMA1-246ENST00000638848 SALL2Q9Y467 1007 aaPredicted RBP15.78■□□□□ 0.12
KCNMA1-246ENST00000638848 CUX1P39880 1505 aa15.78■□□□□ 0.12
KCNMA1-246ENST00000638848 NCAPD3P42695 1498 aa15.78■□□□□ 0.12
KCNMA1-246ENST00000638848 HSPA5P11021 654 aaKnown RBP15.76■□□□□ 0.11
KCNMA1-246ENST00000638848 MRS2Q9HD23 443 aa15.76■□□□□ 0.11
KCNMA1-246ENST00000638848 TOP2BQ02880 1626 aa15.76■□□□□ 0.11
KCNMA1-246ENST00000638848 IGF1RP08069 1367 aa15.75■□□□□ 0.11
KCNMA1-246ENST00000638848 CCER2I3L3R5 266 aa15.71■□□□□ 0.11
KCNMA1-246ENST00000638848 MTUS2Q5JR59 1369 aa15.71■□□□□ 0.11
KCNMA1-246ENST00000638848 HMGXB3Q12766 1538 aa15.71■□□□□ 0.1
KCNMA1-246ENST00000638848 NPM2Q86SE8 214 aaKnown RBP15.7■□□□□ 0.1
KCNMA1-246ENST00000638848 LRRC9Q6ZRR7 1453 aa15.69■□□□□ 0.1
KCNMA1-246ENST00000638848 WASHC2AQ641Q2 1341 aa15.68■□□□□ 0.1
KCNMA1-246ENST00000638848 C11orf95C9JLR9 678 aaPredicted RBP15.67■□□□□ 0.1
KCNMA1-246ENST00000638848 ERICH3Q5RHP9 1530 aa15.66■□□□□ 0.1
KCNMA1-246ENST00000638848 EIF4G2P78344 907 aaKnown RBP eCLIP15.63■□□□□ 0.09
KCNMA1-246ENST00000638848 L3MBTL2Q969R5 705 aa15.62■□□□□ 0.09
KCNMA1-246ENST00000638848 TIAM1Q13009 1591 aa15.61■□□□□ 0.09
KCNMA1-246ENST00000638848 PAK3O75914 559 aaPredicted RBP15.61■□□□□ 0.09
KCNMA1-246ENST00000638848 DEKP35659 375 aaKnown RBP15.61■□□□□ 0.09
KCNMA1-246ENST00000638848 RAD54L2Q9Y4B4 1467 aa15.6■□□□□ 0.09
KCNMA1-246ENST00000638848 RTN4Q9NQC3 1192 aaKnown RBP15.6■□□□□ 0.09
KCNMA1-246ENST00000638848 PTPRKQ15262 1439 aa15.59■□□□□ 0.09
KCNMA1-246ENST00000638848 PPP4R2Q9NY27 417 aa15.58■□□□□ 0.08
KCNMA1-246ENST00000638848 ZNF777Q9ULD5 760 aaPredicted RBP15.58■□□□□ 0.08
KCNMA1-246ENST00000638848 CCDC18Q5T9S5 1454 aa15.58■□□□□ 0.08
KCNMA1-246ENST00000638848 AQRO60306 1485 aaKnown RBP eCLIP15.57■□□□□ 0.08
KCNMA1-246ENST00000638848 FGD5Q6ZNL6 1462 aa15.56■□□□□ 0.08
KCNMA1-246ENST00000638848 CCDC136Q96JN2 1154 aa15.56■□□□□ 0.08
KCNMA1-246ENST00000638848 TDRD9Q8NDG6 1382 aaKnown RBP15.56■□□□□ 0.08
KCNMA1-246ENST00000638848 FHAD1B1AJZ9 1412 aa15.54■□□□□ 0.08
KCNMA1-246ENST00000638848 PCF11O94913 1555 aaKnown RBP15.53■□□□□ 0.08
KCNMA1-246ENST00000638848 PRKRIP1Q9H875 184 aaPredicted RBP15.53■□□□□ 0.08
KCNMA1-246ENST00000638848 KDM2AQ9Y2K7 1162 aa15.53■□□□□ 0.08
KCNMA1-246ENST00000638848 BIVM-ERCC5R4GMW8 1640 aa15.51■□□□□ 0.07
KCNMA1-246ENST00000638848 MPHOSPH9Q99550 1183 aa15.51■□□□□ 0.07
KCNMA1-246ENST00000638848 NESP48681 1621 aa15.51■□□□□ 0.07
KCNMA1-246ENST00000638848 NBPF8Q3BBV2 869 aa15.51■□□□□ 0.07
KCNMA1-246ENST00000638848 SLC4A1APQ9BWU0 796 aaKnown RBP15.51■□□□□ 0.07
KCNMA1-246ENST00000638848 TIMELESSQ9UNS1 1208 aa15.5■□□□□ 0.07
KCNMA1-246ENST00000638848 LAS1LQ9Y4W2 734 aaKnown RBP15.5■□□□□ 0.07
KCNMA1-246ENST00000638848 FGD6Q6ZV73 1430 aa15.5■□□□□ 0.07
KCNMA1-246ENST00000638848 SKAP1Q86WV1 359 aa15.5■□□□□ 0.07
KCNMA1-246ENST00000638848 AKNAQ7Z591 1439 aa15.49■□□□□ 0.07
KCNMA1-246ENST00000638848 NOP58Q9Y2X3 529 aaKnown RBP15.49■□□□□ 0.07
KCNMA1-246ENST00000638848 ZNF644Q9H582 1327 aaPredicted RBP15.49■□□□□ 0.07
KCNMA1-246ENST00000638848 FANCIQ9NVI1 1328 aa15.47■□□□□ 0.07
KCNMA1-246ENST00000638848 CFTRP13569 1480 aa15.47■□□□□ 0.07
KCNMA1-246ENST00000638848 RTL5Q5HYW3 569 aaPredicted RBP15.45■□□□□ 0.06
KCNMA1-246ENST00000638848 THOC2Q8NI27 1593 aaKnown RBP15.43■□□□□ 0.06
KCNMA1-246ENST00000638848 CADPSQ9ULU8 1353 aa15.43■□□□□ 0.06
KCNMA1-246ENST00000638848 ANP32AP39687 249 aaKnown RBP15.43■□□□□ 0.06
KCNMA1-246ENST00000638848 TMC1Q8TDI8 760 aa15.43■□□□□ 0.06
KCNMA1-246ENST00000638848 KIF7Q2M1P5 1343 aa15.42■□□□□ 0.06
KCNMA1-246ENST00000638848 UACAQ9BZF9 1416 aa15.42■□□□□ 0.06
KCNMA1-246ENST00000638848 NAIPQ13075 1403 aa15.42■□□□□ 0.06
KCNMA1-246ENST00000638848 KIF21AQ7Z4S6 1674 aa15.41■□□□□ 0.06
KCNMA1-246ENST00000638848 ZBTB47Q9UFB7 747 aaPredicted RBP15.4■□□□□ 0.06
KCNMA1-246ENST00000638848 FMN1Q68DA7 1419 aa15.38■□□□□ 0.05
KCNMA1-246ENST00000638848 CCDC7Q96M83 1385 aa15.38■□□□□ 0.05
KCNMA1-246ENST00000638848 NCOA2Q15596 1464 aa15.38■□□□□ 0.05
KCNMA1-246ENST00000638848 FBLN2P98095 1184 aa15.37■□□□□ 0.05
KCNMA1-246ENST00000638848 PLIN1O60240 522 aa15.37■□□□□ 0.05
KCNMA1-246ENST00000638848 LAMC3Q9Y6N6 1575 aa15.36■□□□□ 0.05
KCNMA1-246ENST00000638848 HFM1A2PYH4 1435 aa15.35■□□□□ 0.05
KCNMA1-246ENST00000638848 ZBED9Q6R2W3 1325 aa15.35■□□□□ 0.05
KCNMA1-246ENST00000638848 CASKIN1Q8WXD9 1431 aa15.35■□□□□ 0.05
KCNMA1-246ENST00000638848 CNTLNQ9NXG0 1405 aa15.35■□□□□ 0.05
KCNMA1-246ENST00000638848 SLC4A3P48751 1232 aa15.34■□□□□ 0.05
KCNMA1-246ENST00000638848 EXOC6Q8TAG9 804 aa15.34■□□□□ 0.05
KCNMA1-246ENST00000638848 FANCD2Q9BXW9 1451 aa15.34■□□□□ 0.05
KCNMA1-246ENST00000638848 IL27Q8NEV9 243 aa15.33■□□□□ 0.05
KCNMA1-246ENST00000638848 RGL3Q3MIN7 710 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms