RNA–Protein interactions for RNA: ENST00000638848.1

KCNMA1-246, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-246ENST00000638848 NISCHQ9Y2I1 1504 aa21.59■■□□□ 1.05
KCNMA1-246ENST00000638848 SHROOM4Q9ULL8 1493 aa19.99■□□□□ 0.79
KCNMA1-246ENST00000638848 SUPT5HO00267 1087 aaKnown RBP19.81■□□□□ 0.76
KCNMA1-246ENST00000638848 DCAF8L2P0C7V8 631 aa19.39■□□□□ 0.7
KCNMA1-246ENST00000638848 PCGF6Q9BYE7 350 aa19.16■□□□□ 0.66
KCNMA1-246ENST00000638848 PPARGC1BQ86YN6 1023 aaKnown RBP19.1■□□□□ 0.65
KCNMA1-246ENST00000638848 HRCP23327 699 aa18.91■□□□□ 0.62
KCNMA1-246ENST00000638848 CHIC1Q5VXU3 224 aa18.84■□□□□ 0.61
KCNMA1-246ENST00000638848 EHMT2Q96KQ7 1210 aa18.83■□□□□ 0.6
KCNMA1-246ENST00000638848 MYO15BQ96JP2 1530 aa18.82■□□□□ 0.6
KCNMA1-246ENST00000638848 LOC105371045A0A1W2PR82 267 aa18.8■□□□□ 0.6
KCNMA1-246ENST00000638848 FAM9AQ8IZU1 332 aaPredicted RBP18.51■□□□□ 0.55
KCNMA1-246ENST00000638848 CCDC180Q9P1Z9 1646 aa18.23■□□□□ 0.51
KCNMA1-246ENST00000638848 ZCCHC6Q5VYS8 1495 aaKnown RBP18.22■□□□□ 0.51
KCNMA1-246ENST00000638848 TTBK1Q5TCY1 1321 aaPredicted RBP18.21■□□□□ 0.51
KCNMA1-246ENST00000638848 TRIM26Q12899 539 aaPredicted RBP18.17■□□□□ 0.5
KCNMA1-246ENST00000638848 TRIM41Q8WV44 630 aa18.06■□□□□ 0.48
KCNMA1-246ENST00000638848 SCAF1Q9H7N4 1312 aaKnown RBP17.91■□□□□ 0.46
KCNMA1-246ENST00000638848 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.9■□□□□ 0.46
KCNMA1-246ENST00000638848 DCAF1Q9Y4B6 1507 aa17.88■□□□□ 0.45
KCNMA1-246ENST00000638848 ABCC9O60706 1549 aa17.8■□□□□ 0.44
KCNMA1-246ENST00000638848 CCER1Q8TC90 406 aaPredicted RBP17.77■□□□□ 0.44
KCNMA1-246ENST00000638848 ZEB1P37275 1124 aaPredicted RBP17.71■□□□□ 0.42
KCNMA1-246ENST00000638848 YTHDC1Q96MU7 727 aaKnown RBP17.67■□□□□ 0.42
KCNMA1-246ENST00000638848 NEUROD1Q13562 356 aa17.6■□□□□ 0.41
KCNMA1-246ENST00000638848 GTF3C3Q9Y5Q9 886 aa17.54■□□□□ 0.4
KCNMA1-246ENST00000638848 RANGAP1P46060 587 aaPredicted RBP17.53■□□□□ 0.4
KCNMA1-246ENST00000638848 SCRIBQ14160 1630 aa17.51■□□□□ 0.39
KCNMA1-246ENST00000638848 RSF1Q96T23 1441 aaPredicted RBP17.48■□□□□ 0.39
KCNMA1-246ENST00000638848 DIEXFQ68CQ4 756 aaKnown RBP17.47■□□□□ 0.39
KCNMA1-246ENST00000638848 ACIN1Q9UKV3 1341 aaKnown RBP17.44■□□□□ 0.38
KCNMA1-246ENST00000638848 PELP1Q8IZL8 1130 aaKnown RBP17.44■□□□□ 0.38
KCNMA1-246ENST00000638848 RB1CC1Q8TDY2 1594 aa17.4■□□□□ 0.38
KCNMA1-246ENST00000638848 UBTFP17480 764 aaKnown RBP17.34■□□□□ 0.37
KCNMA1-246ENST00000638848 HNRNPUL2Q1KMD3 747 aaKnown RBP17.33■□□□□ 0.37
KCNMA1-246ENST00000638848 CENPBP07199 599 aaPredicted RBP17.31■□□□□ 0.36
KCNMA1-246ENST00000638848 CECR2Q9BXF3 1484 aa17.26■□□□□ 0.35
KCNMA1-246ENST00000638848 UNC13AQ9UPW8 1703 aa17.11■□□□□ 0.33
KCNMA1-246ENST00000638848 MIER1Q8N108 512 aa17.11■□□□□ 0.33
KCNMA1-246ENST00000638848 MROH2BQ7Z745 1585 aa17.06■□□□□ 0.32
KCNMA1-246ENST00000638848 ZNF316A6NFI3 1004 aaPredicted RBP17.06■□□□□ 0.32
KCNMA1-246ENST00000638848 NACADO15069 1562 aa17.06■□□□□ 0.32
KCNMA1-246ENST00000638848 ABCC8Q09428 1581 aa17■□□□□ 0.31
KCNMA1-246ENST00000638848 SOGA1O94964 1423 aa16.98■□□□□ 0.31
KCNMA1-246ENST00000638848 WIZO95785 1651 aa16.97■□□□□ 0.31
KCNMA1-246ENST00000638848 PABPN1Q86U42 306 aaKnown RBP eCLIP16.97■□□□□ 0.31
KCNMA1-246ENST00000638848 CCDC88BA6NC98 1476 aa16.95■□□□□ 0.3
KCNMA1-246ENST00000638848 ITGAEP38570 1179 aa16.95■□□□□ 0.3
KCNMA1-246ENST00000638848 CEP162Q5TB80 1403 aa16.94■□□□□ 0.3
KCNMA1-246ENST00000638848 APLP2Q06481 763 aa16.93■□□□□ 0.3
KCNMA1-246ENST00000638848 CSRNP3Q8WYN3 585 aa16.91■□□□□ 0.3
KCNMA1-246ENST00000638848 BICRAQ9NZM4 1560 aa16.91■□□□□ 0.3
KCNMA1-246ENST00000638848 RUSC2Q8N2Y8 1516 aa16.89■□□□□ 0.3
KCNMA1-246ENST00000638848 BCANQ96GW7 911 aa16.84■□□□□ 0.29
KCNMA1-246ENST00000638848 DNAJC5BQ9UF47 199 aa16.75■□□□□ 0.27
KCNMA1-246ENST00000638848 KCNH8Q96L42 1107 aa16.68■□□□□ 0.26
KCNMA1-246ENST00000638848 TNIKQ9UKE5 1360 aa16.66■□□□□ 0.26
KCNMA1-246ENST00000638848 HIRIP3Q9BW71 556 aaPredicted RBP16.65■□□□□ 0.26
KCNMA1-246ENST00000638848 ATP1B4Q9UN42 357 aaPredicted RBP16.63■□□□□ 0.25
KCNMA1-246ENST00000638848 SUPT16HQ9Y5B9 1047 aaKnown RBP16.58■□□□□ 0.25
KCNMA1-246ENST00000638848 CLIP1P30622 1438 aa16.58■□□□□ 0.24
KCNMA1-246ENST00000638848 KANK4Q5T7N3 995 aaPredicted RBP16.55■□□□□ 0.24
KCNMA1-246ENST00000638848 WRNQ14191 1432 aaPredicted RBP eCLIP16.55■□□□□ 0.24
KCNMA1-246ENST00000638848 GOLGA3Q08378 1498 aa16.52■□□□□ 0.23
KCNMA1-246ENST00000638848 BAZ1AQ9NRL2 1556 aaPredicted RBP16.51■□□□□ 0.23
KCNMA1-246ENST00000638848 MYT1Q01538 1121 aa16.5■□□□□ 0.23
KCNMA1-246ENST00000638848 DDX10Q13206 875 aaKnown RBP16.47■□□□□ 0.23
KCNMA1-246ENST00000638848 TRIM52Q96A61 297 aa16.45■□□□□ 0.22
KCNMA1-246ENST00000638848 FKBP8Q14318 412 aa16.45■□□□□ 0.22
KCNMA1-246ENST00000638848 P3H3Q8IVL6 736 aa16.45■□□□□ 0.22
KCNMA1-246ENST00000638848 RAPGEF2Q9Y4G8 1499 aa16.43■□□□□ 0.22
KCNMA1-246ENST00000638848 SMARCA2P51531 1590 aa16.42■□□□□ 0.22
KCNMA1-246ENST00000638848 TSHZ2Q9NRE2 1034 aa16.41■□□□□ 0.22
KCNMA1-246ENST00000638848 FAM50AQ14320 339 aaKnown RBP16.41■□□□□ 0.22
KCNMA1-246ENST00000638848 SIN3AQ96ST3 1273 aa16.4■□□□□ 0.22
KCNMA1-246ENST00000638848 TOP2AP11388 1531 aaKnown RBP16.39■□□□□ 0.21
KCNMA1-246ENST00000638848 CNGB1Q14028 1251 aaPredicted RBP16.39■□□□□ 0.21
KCNMA1-246ENST00000638848 IRX6P78412 446 aaPredicted RBP16.36■□□□□ 0.21
KCNMA1-246ENST00000638848 EIF4G1Q04637 1599 aaKnown RBP16.36■□□□□ 0.21
KCNMA1-246ENST00000638848 VPS8Q8N3P4 1428 aa16.34■□□□□ 0.21
KCNMA1-246ENST00000638848 DHX57Q6P158 1386 aaKnown RBP16.34■□□□□ 0.21
KCNMA1-246ENST00000638848 CEP164Q9UPV0 1460 aa16.33■□□□□ 0.2
KCNMA1-246ENST00000638848 SMARCA4P51532 1647 aa16.31■□□□□ 0.2
KCNMA1-246ENST00000638848 EEA1Q15075 1411 aa16.29■□□□□ 0.2
KCNMA1-246ENST00000638848 SYNJ1O43426 1573 aa16.26■□□□□ 0.19
KCNMA1-246ENST00000638848 SENP3-EIF4A1A0A087X0R7 540 aa16.26■□□□□ 0.19
KCNMA1-246ENST00000638848 CC2D2AQ9P2K1 1620 aa16.26■□□□□ 0.19
KCNMA1-246ENST00000638848 NEFLP07196 543 aa16.25■□□□□ 0.19
KCNMA1-246ENST00000638848 ANP32EQ9BTT0 268 aa16.21■□□□□ 0.19
KCNMA1-246ENST00000638848 KIF21BO75037 1637 aa16.19■□□□□ 0.18
KCNMA1-246ENST00000638848 RAB3GAP2Q9H2M9 1393 aa16.14■□□□□ 0.17
KCNMA1-246ENST00000638848 ARID3CA6NKF2 412 aa16.13■□□□□ 0.17
KCNMA1-246ENST00000638848 CCNB3Q8WWL7 1395 aa16.12■□□□□ 0.17
KCNMA1-246ENST00000638848 RBM19Q9Y4C8 960 aaKnown RBP16.11■□□□□ 0.17
KCNMA1-246ENST00000638848 ANP32CO43423 234 aa16.1■□□□□ 0.17
KCNMA1-246ENST00000638848 BCL11AQ9H165 835 aa16.1■□□□□ 0.17
KCNMA1-246ENST00000638848 ARAP1Q96P48 1450 aa16.09■□□□□ 0.17
KCNMA1-246ENST00000638848 BAZ1BQ9UIG0 1483 aaKnown RBP16.08■□□□□ 0.17
KCNMA1-246ENST00000638848 HNRNPUQ00839 825 aaKnown RBP eCLIP16.08■□□□□ 0.16
KCNMA1-246ENST00000638848 POLR3GLQ9BT43 218 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms