RNA–Protein interactions for RNA: ENST00000638295.1

SCARB2-207, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-207ENST00000638295 FGD5Q6ZNL6 1462 aa9.52□□□□□ -0.88
SCARB2-207ENST00000638295 PTPRGP23470 1445 aa9.52□□□□□ -0.89
SCARB2-207ENST00000638295 RAD54L2Q9Y4B4 1467 aa9.5□□□□□ -0.89
SCARB2-207ENST00000638295 POLR3GLQ9BT43 218 aa9.5□□□□□ -0.89
SCARB2-207ENST00000638295 TOPBP1Q92547 1522 aa9.48□□□□□ -0.89
SCARB2-207ENST00000638295 DNAJC5Q9H3Z4 198 aa9.48□□□□□ -0.89
SCARB2-207ENST00000638295 SLC4A1APQ9BWU0 796 aaKnown RBP9.48□□□□□ -0.89
SCARB2-207ENST00000638295 CHGAP10645 457 aaKnown RBP9.47□□□□□ -0.89
SCARB2-207ENST00000638295 MLECQ14165 292 aa9.47□□□□□ -0.89
SCARB2-207ENST00000638295 NEFLP07196 543 aa9.46□□□□□ -0.9
SCARB2-207ENST00000638295 CFDP1Q9UEE9 299 aaPredicted RBP9.46□□□□□ -0.9
SCARB2-207ENST00000638295 FHAD1B1AJZ9 1412 aa9.45□□□□□ -0.9
SCARB2-207ENST00000638295 EFCAB2Q5VUJ9 269 aa9.44□□□□□ -0.9
SCARB2-207ENST00000638295 GOLGA3Q08378 1498 aa9.44□□□□□ -0.9
SCARB2-207ENST00000638295 CLIP1P30622 1438 aa9.44□□□□□ -0.9
SCARB2-207ENST00000638295 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.43□□□□□ -0.9
SCARB2-207ENST00000638295 DNMBPQ6XZF7 1577 aa9.42□□□□□ -0.9
SCARB2-207ENST00000638295 PEG3Q9GZU2 1588 aa9.42□□□□□ -0.9
SCARB2-207ENST00000638295 ACIN1Q9UKV3 1341 aaKnown RBP9.41□□□□□ -0.9
SCARB2-207ENST00000638295 RAPGEF2Q9Y4G8 1499 aa9.41□□□□□ -0.9
SCARB2-207ENST00000638295 POLA1P09884 1462 aaPredicted RBP9.4□□□□□ -0.9
SCARB2-207ENST00000638295 SNAPC4Q5SXM2 1469 aa9.4□□□□□ -0.9
SCARB2-207ENST00000638295 PPP1R15AO75807 674 aaPredicted RBP9.4□□□□□ -0.9
SCARB2-207ENST00000638295 PRG4Q92954 1404 aaPredicted RBP9.39□□□□□ -0.91
SCARB2-207ENST00000638295 C14orf37Q86TY3 774 aa9.39□□□□□ -0.91
SCARB2-207ENST00000638295 TNIKQ9UKE5 1360 aa9.37□□□□□ -0.91
SCARB2-207ENST00000638295 CCNB3Q8WWL7 1395 aa9.36□□□□□ -0.91
SCARB2-207ENST00000638295 MAGI1Q96QZ7 1491 aaPredicted RBP9.36□□□□□ -0.91
SCARB2-207ENST00000638295 SYNJ2O15056 1496 aa9.35□□□□□ -0.91
SCARB2-207ENST00000638295 SYNJ1O43426 1573 aa9.34□□□□□ -0.91
SCARB2-207ENST00000638295 URB2Q14146 1524 aaKnown RBP9.34□□□□□ -0.91
SCARB2-207ENST00000638295 FMN1Q68DA7 1419 aa9.34□□□□□ -0.91
SCARB2-207ENST00000638295 SCAF1Q9H7N4 1312 aaKnown RBP9.34□□□□□ -0.92
SCARB2-207ENST00000638295 IGF1RP08069 1367 aa9.33□□□□□ -0.92
SCARB2-207ENST00000638295 HDGFP51858 240 aaKnown RBP9.33□□□□□ -0.92
SCARB2-207ENST00000638295 CHIC2Q9UKJ5 165 aa9.33□□□□□ -0.92
SCARB2-207ENST00000638295 ZNF326Q5BKZ1 582 aaKnown RBP9.32□□□□□ -0.92
SCARB2-207ENST00000638295 NEFMP07197 916 aa9.32□□□□□ -0.92
SCARB2-207ENST00000638295 NEUROD1Q13562 356 aa9.31□□□□□ -0.92
SCARB2-207ENST00000638295 GGT6Q6P531 493 aa9.31□□□□□ -0.92
SCARB2-207ENST00000638295 ZNF608Q9ULD9 1512 aaPredicted RBP9.3□□□□□ -0.92
SCARB2-207ENST00000638295 KANK1Q14678 1352 aa9.28□□□□□ -0.92
SCARB2-207ENST00000638295 SPAG9O60271 1321 aaKnown RBP9.26□□□□□ -0.93
SCARB2-207ENST00000638295 ABCA10Q8WWZ4 1543 aa9.26□□□□□ -0.93
SCARB2-207ENST00000638295 CUX1P39880 1505 aa9.25□□□□□ -0.93
SCARB2-207ENST00000638295 RSPH4AQ5TD94 716 aa9.25□□□□□ -0.93
SCARB2-207ENST00000638295 WDR62O43379 1518 aa9.25□□□□□ -0.93
SCARB2-207ENST00000638295 GRIN2AQ12879 1464 aa9.24□□□□□ -0.93
SCARB2-207ENST00000638295 KIAA0586Q9BVV6 1533 aa9.23□□□□□ -0.93
SCARB2-207ENST00000638295 HAP1P54257 671 aaPredicted RBP9.23□□□□□ -0.93
SCARB2-207ENST00000638295 ERICH6Q7L0X2 663 aa9.22□□□□□ -0.93
SCARB2-207ENST00000638295 FHOD3Q2V2M9 1422 aa9.22□□□□□ -0.93
SCARB2-207ENST00000638295 CNGB1Q14028 1251 aaPredicted RBP9.22□□□□□ -0.93
SCARB2-207ENST00000638295 EID1Q9Y6B2 187 aa9.22□□□□□ -0.93
SCARB2-207ENST00000638295 KIF21AQ7Z4S6 1674 aa9.21□□□□□ -0.94
SCARB2-207ENST00000638295 POGZQ7Z3K3 1410 aa9.21□□□□□ -0.94
SCARB2-207ENST00000638295 HRCP23327 699 aa9.21□□□□□ -0.94
SCARB2-207ENST00000638295 KIF3BO15066 747 aa9.2□□□□□ -0.94
SCARB2-207ENST00000638295 CEP162Q5TB80 1403 aa9.2□□□□□ -0.94
SCARB2-207ENST00000638295 CCDC18Q5T9S5 1454 aa9.2□□□□□ -0.94
SCARB2-207ENST00000638295 UACAQ9BZF9 1416 aa9.19□□□□□ -0.94
SCARB2-207ENST00000638295 TONSLQ96HA7 1378 aa9.19□□□□□ -0.94
SCARB2-207ENST00000638295 RRP7BPQ9NSQ0 103 aa9.19□□□□□ -0.94
SCARB2-207ENST00000638295 WASHC2CQ9Y4E1 1318 aa9.19□□□□□ -0.94
SCARB2-207ENST00000638295 TOP2BQ02880 1626 aa9.18□□□□□ -0.94
SCARB2-207ENST00000638295 YTHDC1Q96MU7 727 aaKnown RBP9.18□□□□□ -0.94
SCARB2-207ENST00000638295 ERICH3Q5RHP9 1530 aa9.17□□□□□ -0.94
SCARB2-207ENST00000638295 ANP32CO43423 234 aa9.17□□□□□ -0.94
SCARB2-207ENST00000638295 SENP3Q9H4L4 574 aaPredicted RBP9.17□□□□□ -0.94
SCARB2-207ENST00000638295 HNRNPMP52272 730 aaKnown RBP eCLIP9.16□□□□□ -0.94
SCARB2-207ENST00000638295 PLB1Q6P1J6 1458 aa9.15□□□□□ -0.94
SCARB2-207ENST00000638295 ZBTB47Q9UFB7 747 aaPredicted RBP9.14□□□□□ -0.95
SCARB2-207ENST00000638295 CD109Q6YHK3 1445 aa9.13□□□□□ -0.95
SCARB2-207ENST00000638295 PRDM2Q13029 1718 aa9.12□□□□□ -0.95
SCARB2-207ENST00000638295 DAXXQ9UER7 740 aaPredicted RBP9.12□□□□□ -0.95
SCARB2-207ENST00000638295 TEX14Q8IWB6 1497 aa9.12□□□□□ -0.95
SCARB2-207ENST00000638295 SLC24A1O60721 1099 aa9.11□□□□□ -0.95
SCARB2-207ENST00000638295 EIF4G3O43432 1585 aaKnown RBP9.1□□□□□ -0.95
SCARB2-207ENST00000638295 DMRT2Q9Y5R5 561 aa9.1□□□□□ -0.95
SCARB2-207ENST00000638295 ANKRD30AQ9BXX3 1397 aa9.1□□□□□ -0.95
SCARB2-207ENST00000638295 RAPGEF3O95398 923 aa9.1□□□□□ -0.95
SCARB2-207ENST00000638295 LMOD2Q6P5Q4 547 aa9.09□□□□□ -0.95
SCARB2-207ENST00000638295 IQGAP2Q13576 1575 aa9.09□□□□□ -0.95
SCARB2-207ENST00000638295 RUSC2Q8N2Y8 1516 aa9.09□□□□□ -0.95
SCARB2-207ENST00000638295 CUL7Q14999 1698 aa9.08□□□□□ -0.96
SCARB2-207ENST00000638295 PLEKHG5O94827 1062 aa9.08□□□□□ -0.96
SCARB2-207ENST00000638295 A0A0G2JS52 829 aa9.08□□□□□ -0.96
SCARB2-207ENST00000638295 MYT1Q01538 1121 aa9.08□□□□□ -0.96
SCARB2-207ENST00000638295 RGL3Q3MIN7 710 aa9.07□□□□□ -0.96
SCARB2-207ENST00000638295 POGKQ9P215 609 aa9.07□□□□□ -0.96
SCARB2-207ENST00000638295 ARHGAP35Q9NRY4 1499 aa9.07□□□□□ -0.96
SCARB2-207ENST00000638295 KDM2AQ9Y2K7 1162 aa9.07□□□□□ -0.96
SCARB2-207ENST00000638295 CDCA8Q53HL2 280 aa9.06□□□□□ -0.96
SCARB2-207ENST00000638295 DIEXFQ68CQ4 756 aaKnown RBP9.06□□□□□ -0.96
SCARB2-207ENST00000638295 THOC2Q8NI27 1593 aaKnown RBP9.05□□□□□ -0.96
SCARB2-207ENST00000638295 CLSPNQ9HAW4 1339 aa9.05□□□□□ -0.96
SCARB2-207ENST00000638295 AFAP1Q8N556 730 aa9.05□□□□□ -0.96
SCARB2-207ENST00000638295 PHLDB1Q86UU1 1377 aa9.04□□□□□ -0.96
SCARB2-207ENST00000638295 ARHGAP5Q13017 1502 aa9.04□□□□□ -0.96
SCARB2-207ENST00000638295 VPS8Q8N3P4 1428 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms