RNA–Protein interactions for RNA: ENST00000638295.1

SCARB2-207, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-207ENST00000638295 NISCHQ9Y2I1 1504 aa12.88□□□□□ -0.35
SCARB2-207ENST00000638295 DCAF8L2P0C7V8 631 aa12.49□□□□□ -0.41
SCARB2-207ENST00000638295 ABCC9O60706 1549 aa11.59□□□□□ -0.55
SCARB2-207ENST00000638295 SHROOM4Q9ULL8 1493 aa11.25□□□□□ -0.61
SCARB2-207ENST00000638295 PABPN1Q86U42 306 aaKnown RBP eCLIP11.16□□□□□ -0.62
SCARB2-207ENST00000638295 CCDC180Q9P1Z9 1646 aa11.07□□□□□ -0.64
SCARB2-207ENST00000638295 SUPT5HO00267 1087 aaKnown RBP11.05□□□□□ -0.64
SCARB2-207ENST00000638295 RB1CC1Q8TDY2 1594 aa10.91□□□□□ -0.66
SCARB2-207ENST00000638295 FAM9AQ8IZU1 332 aaPredicted RBP10.88□□□□□ -0.67
SCARB2-207ENST00000638295 NACADO15069 1562 aa10.77□□□□□ -0.69
SCARB2-207ENST00000638295 SCRIBQ14160 1630 aa10.68□□□□□ -0.7
SCARB2-207ENST00000638295 APLP2Q06481 763 aa10.6□□□□□ -0.71
SCARB2-207ENST00000638295 ZCCHC6Q5VYS8 1495 aaKnown RBP10.59□□□□□ -0.71
SCARB2-207ENST00000638295 FBLN2P98095 1184 aa10.45□□□□□ -0.74
SCARB2-207ENST00000638295 ERCC6Q03468 1493 aa10.41□□□□□ -0.74
SCARB2-207ENST00000638295 EHMT2Q96KQ7 1210 aa10.41□□□□□ -0.74
SCARB2-207ENST00000638295 TRIM41Q8WV44 630 aa10.39□□□□□ -0.75
SCARB2-207ENST00000638295 DCAF1Q9Y4B6 1507 aa10.38□□□□□ -0.75
SCARB2-207ENST00000638295 MYO15BQ96JP2 1530 aa10.36□□□□□ -0.75
SCARB2-207ENST00000638295 CECR2Q9BXF3 1484 aa10.35□□□□□ -0.75
SCARB2-207ENST00000638295 TTBK1Q5TCY1 1321 aaPredicted RBP10.34□□□□□ -0.75
SCARB2-207ENST00000638295 ATP1B4Q9UN42 357 aaPredicted RBP10.34□□□□□ -0.75
SCARB2-207ENST00000638295 RANGAP1P46060 587 aaPredicted RBP10.32□□□□□ -0.76
SCARB2-207ENST00000638295 BAZ1BQ9UIG0 1483 aaKnown RBP10.28□□□□□ -0.76
SCARB2-207ENST00000638295 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.28□□□□□ -0.76
SCARB2-207ENST00000638295 HNRNPUL2Q1KMD3 747 aaKnown RBP10.28□□□□□ -0.76
SCARB2-207ENST00000638295 UBTFP17480 764 aaKnown RBP10.26□□□□□ -0.77
SCARB2-207ENST00000638295 MYT1LQ9UL68 1186 aa10.23□□□□□ -0.77
SCARB2-207ENST00000638295 NPM1P06748 294 aaKnown RBP eCLIP10.22□□□□□ -0.77
SCARB2-207ENST00000638295 PDS5BQ9NTI5 1447 aa10.17□□□□□ -0.78
SCARB2-207ENST00000638295 CHMP7Q8WUX9 453 aaPredicted RBP10.17□□□□□ -0.78
SCARB2-207ENST00000638295 BAZ1AQ9NRL2 1556 aaPredicted RBP10.16□□□□□ -0.78
SCARB2-207ENST00000638295 SMARCA2P51531 1590 aa10.14□□□□□ -0.79
SCARB2-207ENST00000638295 DNAJC5BQ9UF47 199 aa10.13□□□□□ -0.79
SCARB2-207ENST00000638295 TRHP20396 242 aaPredicted RBP10.06□□□□□ -0.8
SCARB2-207ENST00000638295 EIF4G1Q04637 1599 aaKnown RBP10.03□□□□□ -0.8
SCARB2-207ENST00000638295 ATAD2BQ9ULI0 1458 aa9.99□□□□□ -0.81
SCARB2-207ENST00000638295 CADPSQ9ULU8 1353 aa9.99□□□□□ -0.81
SCARB2-207ENST00000638295 RSF1Q96T23 1441 aaPredicted RBP9.98□□□□□ -0.81
SCARB2-207ENST00000638295 CC2D2AQ9P2K1 1620 aa9.97□□□□□ -0.81
SCARB2-207ENST00000638295 OSCARQ8IYS5 282 aa9.95□□□□□ -0.82
SCARB2-207ENST00000638295 NCAPD3P42695 1498 aa9.93□□□□□ -0.82
SCARB2-207ENST00000638295 CEP164Q9UPV0 1460 aa9.91□□□□□ -0.82
SCARB2-207ENST00000638295 CDK11AQ9UQ88 783 aaPredicted RBP9.91□□□□□ -0.82
SCARB2-207ENST00000638295 ESF1Q9H501 851 aaKnown RBP9.9□□□□□ -0.82
SCARB2-207ENST00000638295 MROH2BQ7Z745 1585 aa9.88□□□□□ -0.83
SCARB2-207ENST00000638295 ZEB1P37275 1124 aaPredicted RBP9.87□□□□□ -0.83
SCARB2-207ENST00000638295 SMARCA4P51532 1647 aa9.86□□□□□ -0.83
SCARB2-207ENST00000638295 PELP1Q8IZL8 1130 aaKnown RBP9.85□□□□□ -0.83
SCARB2-207ENST00000638295 P3H3Q8IVL6 736 aa9.84□□□□□ -0.83
SCARB2-207ENST00000638295 PCGF6Q9BYE7 350 aa9.84□□□□□ -0.83
SCARB2-207ENST00000638295 ARID3CA6NKF2 412 aa9.84□□□□□ -0.83
SCARB2-207ENST00000638295 BICRAQ9NZM4 1560 aa9.83□□□□□ -0.84
SCARB2-207ENST00000638295 CSRNP3Q8WYN3 585 aa9.83□□□□□ -0.84
SCARB2-207ENST00000638295 WRNQ14191 1432 aaPredicted RBP eCLIP9.82□□□□□ -0.84
SCARB2-207ENST00000638295 FANCD2Q9BXW9 1451 aa9.82□□□□□ -0.84
SCARB2-207ENST00000638295 CCER1Q8TC90 406 aaPredicted RBP9.82□□□□□ -0.84
SCARB2-207ENST00000638295 CHIC1Q5VXU3 224 aa9.81□□□□□ -0.84
SCARB2-207ENST00000638295 ABCC8Q09428 1581 aa9.81□□□□□ -0.84
SCARB2-207ENST00000638295 CYB5RLQ6IPT4 315 aa9.8□□□□□ -0.84
SCARB2-207ENST00000638295 SOGA1O94964 1423 aa9.8□□□□□ -0.84
SCARB2-207ENST00000638295 AEBP2Q6ZN18 517 aaPredicted RBP9.78□□□□□ -0.84
SCARB2-207ENST00000638295 TDRD9Q8NDG6 1382 aaKnown RBP9.77□□□□□ -0.85
SCARB2-207ENST00000638295 KIF27Q86VH2 1401 aa9.77□□□□□ -0.85
SCARB2-207ENST00000638295 TOP2AP11388 1531 aaKnown RBP9.75□□□□□ -0.85
SCARB2-207ENST00000638295 CCDC88BA6NC98 1476 aa9.75□□□□□ -0.85
SCARB2-207ENST00000638295 PLPPR3Q6T4P5 718 aa9.75□□□□□ -0.85
SCARB2-207ENST00000638295 KCNH8Q96L42 1107 aa9.74□□□□□ -0.85
SCARB2-207ENST00000638295 HMGXB3Q12766 1538 aa9.74□□□□□ -0.85
SCARB2-207ENST00000638295 MRC2Q9UBG0 1479 aa9.73□□□□□ -0.85
SCARB2-207ENST00000638295 ARID4BQ4LE39 1312 aaPredicted RBP9.71□□□□□ -0.85
SCARB2-207ENST00000638295 CUX2O14529 1486 aa9.71□□□□□ -0.85
SCARB2-207ENST00000638295 PLEKHD1A6NEE1 506 aa9.71□□□□□ -0.86
SCARB2-207ENST00000638295 ZNF777Q9ULD5 760 aaPredicted RBP9.71□□□□□ -0.86
SCARB2-207ENST00000638295 NESP48681 1621 aa9.7□□□□□ -0.86
SCARB2-207ENST00000638295 ITGAEP38570 1179 aa9.7□□□□□ -0.86
SCARB2-207ENST00000638295 CARMIL2Q6F5E8 1435 aa9.69□□□□□ -0.86
SCARB2-207ENST00000638295 WIZO95785 1651 aa9.69□□□□□ -0.86
SCARB2-207ENST00000638295 TRIM26Q12899 539 aaPredicted RBP9.65□□□□□ -0.86
SCARB2-207ENST00000638295 BCANQ96GW7 911 aa9.65□□□□□ -0.86
SCARB2-207ENST00000638295 LAMC3Q9Y6N6 1575 aa9.64□□□□□ -0.87
SCARB2-207ENST00000638295 CARMIL1Q5VZK9 1371 aa9.63□□□□□ -0.87
SCARB2-207ENST00000638295 UNC13AQ9UPW8 1703 aa9.63□□□□□ -0.87
SCARB2-207ENST00000638295 JPH4Q96JJ6 628 aa9.63□□□□□ -0.87
SCARB2-207ENST00000638295 FAM50AQ14320 339 aaKnown RBP9.62□□□□□ -0.87
SCARB2-207ENST00000638295 IFT140Q96RY7 1462 aa9.61□□□□□ -0.87
SCARB2-207ENST00000638295 STAG3Q9UJ98 1225 aa9.61□□□□□ -0.87
SCARB2-207ENST00000638295 CFTRP13569 1480 aa9.6□□□□□ -0.87
SCARB2-207ENST00000638295 LOC105371045A0A1W2PR82 267 aa9.59□□□□□ -0.87
SCARB2-207ENST00000638295 PPARGC1BQ86YN6 1023 aaKnown RBP9.59□□□□□ -0.87
SCARB2-207ENST00000638295 EEA1Q15075 1411 aa9.59□□□□□ -0.87
SCARB2-207ENST00000638295 TSPY4P0CV99 314 aa9.57□□□□□ -0.88
SCARB2-207ENST00000638295 TSPY10P0CW01 314 aa9.57□□□□□ -0.88
SCARB2-207ENST00000638295 TRIM52Q96A61 297 aa9.57□□□□□ -0.88
SCARB2-207ENST00000638295 AQRO60306 1485 aaKnown RBP eCLIP9.55□□□□□ -0.88
SCARB2-207ENST00000638295 GAPVD1Q14C86 1478 aa9.55□□□□□ -0.88
SCARB2-207ENST00000638295 GRIN2BQ13224 1484 aa9.53□□□□□ -0.88
SCARB2-207ENST00000638295 FAM69CQ0P6D2 419 aa9.53□□□□□ -0.88
SCARB2-207ENST00000638295 CENPBP07199 599 aaPredicted RBP9.53□□□□□ -0.88
SCARB2-207ENST00000638295 MTUS2Q5JR59 1369 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms