RNA–Protein interactions for RNA: ENST00000638000.1

ARID1B-235, Transcript of AT-rich interaction domain 1B, humanhuman

TSL 5

Gene ARID1B, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-235ENST00000638000 CARMIL1Q5VZK9 1371 aa13.15□□□□□ -0.3
ARID1B-235ENST00000638000 URB2Q14146 1524 aaKnown RBP13.14□□□□□ -0.31
ARID1B-235ENST00000638000 NESP48681 1621 aa13.13□□□□□ -0.31
ARID1B-235ENST00000638000 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.13□□□□□ -0.317e-7■■■□□ 15.9
ARID1B-235ENST00000638000 ARAP1Q96P48 1450 aa13.12□□□□□ -0.31
ARID1B-235ENST00000638000 ABCA5Q8WWZ7 1642 aa13.11□□□□□ -0.31
ARID1B-235ENST00000638000 ARHGAP35Q9NRY4 1499 aa13.09□□□□□ -0.31
ARID1B-235ENST00000638000 EFCAB5A4FU69 1503 aa13.08□□□□□ -0.31
ARID1B-235ENST00000638000 EHMT2Q96KQ7 1210 aa13.08□□□□□ -0.32
ARID1B-235ENST00000638000 TARBP1Q13395 1621 aaKnown RBP13.06□□□□□ -0.32
ARID1B-235ENST00000638000 KIF21AQ7Z4S6 1674 aa13.04□□□□□ -0.32
ARID1B-235ENST00000638000 FHAD1B1AJZ9 1412 aa13.04□□□□□ -0.32
ARID1B-235ENST00000638000 AQRO60306 1485 aaKnown RBP eCLIP13.04□□□□□ -0.32
ARID1B-235ENST00000638000 MRC2Q9UBG0 1479 aa13.03□□□□□ -0.32
ARID1B-235ENST00000638000 RAD54L2Q9Y4B4 1467 aa13.02□□□□□ -0.32
ARID1B-235ENST00000638000 GAPVD1Q14C86 1478 aa13.02□□□□□ -0.33
ARID1B-235ENST00000638000 APLP2Q06481 763 aa13.01□□□□□ -0.33
ARID1B-235ENST00000638000 WDR62O43379 1518 aa13□□□□□ -0.33
ARID1B-235ENST00000638000 KCNA4P22459 653 aa13□□□□□ -0.33
ARID1B-235ENST00000638000 CTTNBP2Q8WZ74 1663 aa12.99□□□□□ -0.33
ARID1B-235ENST00000638000 RRBP1Q9P2E9 1410 aaKnown RBP12.99□□□□□ -0.33
ARID1B-235ENST00000638000 IFT140Q96RY7 1462 aa12.95□□□□□ -0.34
ARID1B-235ENST00000638000 FYCO1Q9BQS8 1478 aa12.95□□□□□ -0.34
ARID1B-235ENST00000638000 SAMD9Q5K651 1589 aa12.94□□□□□ -0.34
ARID1B-235ENST00000638000 TIAM1Q13009 1591 aa12.94□□□□□ -0.34
ARID1B-235ENST00000638000 THOC2Q8NI27 1593 aaKnown RBP12.94□□□□□ -0.34
ARID1B-235ENST00000638000 CLSPNQ9HAW4 1339 aa12.93□□□□□ -0.34
ARID1B-235ENST00000638000 FMN1Q68DA7 1419 aa12.93□□□□□ -0.34
ARID1B-235ENST00000638000 CASKIN1Q8WXD9 1431 aa12.92□□□□□ -0.34
ARID1B-235ENST00000638000 CFAP43Q8NDM7 1665 aa12.92□□□□□ -0.34
ARID1B-235ENST00000638000 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.91□□□□□ -0.34
ARID1B-235ENST00000638000 DSG3P32926 999 aa12.9□□□□□ -0.34
ARID1B-235ENST00000638000 GRIN2BQ13224 1484 aa12.9□□□□□ -0.34
ARID1B-235ENST00000638000 PBRM1Q86U86 1689 aa12.89□□□□□ -0.35
ARID1B-235ENST00000638000 ADAMTS12P58397 1594 aa12.89□□□□□ -0.35
ARID1B-235ENST00000638000 LRRC9Q6ZRR7 1453 aa12.88□□□□□ -0.35
ARID1B-235ENST00000638000 TDRD9Q8NDG6 1382 aaKnown RBP12.87□□□□□ -0.35
ARID1B-235ENST00000638000 PPARGC1BQ86YN6 1023 aaKnown RBP12.86□□□□□ -0.35
ARID1B-235ENST00000638000 SNAPC4Q5SXM2 1469 aa12.85□□□□□ -0.35
ARID1B-235ENST00000638000 PCF11O94913 1555 aaKnown RBP12.83□□□□□ -0.35
ARID1B-235ENST00000638000 CAPN15O75808 1086 aa12.83□□□□□ -0.36
ARID1B-235ENST00000638000 NCBP3Q53F19 620 aaKnown RBP12.83□□□□□ -0.36
ARID1B-235ENST00000638000 UGGT2Q9NYU1 1516 aa12.83□□□□□ -0.36
ARID1B-235ENST00000638000 CCNB3Q8WWL7 1395 aa12.83□□□□□ -0.36
ARID1B-235ENST00000638000 MAGI1Q96QZ7 1491 aaPredicted RBP12.82□□□□□ -0.36
ARID1B-235ENST00000638000 KANK4Q5T7N3 995 aaPredicted RBP12.81□□□□□ -0.36
ARID1B-235ENST00000638000 CCER1Q8TC90 406 aaPredicted RBP12.81□□□□□ -0.36
ARID1B-235ENST00000638000 IQGAP2Q13576 1575 aa12.81□□□□□ -0.36
ARID1B-235ENST00000638000 KIAA0586Q9BVV6 1533 aa12.79□□□□□ -0.36
ARID1B-235ENST00000638000 CCDC18Q5T9S5 1454 aa12.78□□□□□ -0.36
ARID1B-235ENST00000638000 FHOD3Q2V2M9 1422 aa12.76□□□□□ -0.37
ARID1B-235ENST00000638000 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.76□□□□□ -0.37
ARID1B-235ENST00000638000 EIF4G3O43432 1585 aaKnown RBP12.75□□□□□ -0.37
ARID1B-235ENST00000638000 ARHGEF11O15085 1522 aa12.74□□□□□ -0.37
ARID1B-235ENST00000638000 ERCC6Q03468 1493 aa12.73□□□□□ -0.37
ARID1B-235ENST00000638000 GRIN2AQ12879 1464 aa12.73□□□□□ -0.37
ARID1B-235ENST00000638000 EHBP1L1Q8N3D4 1523 aa12.72□□□□□ -0.37
ARID1B-235ENST00000638000 SYNJ2O15056 1496 aa12.72□□□□□ -0.37
ARID1B-235ENST00000638000 ZNF608Q9ULD9 1512 aaPredicted RBP12.72□□□□□ -0.37
ARID1B-235ENST00000638000 SPINK5Q9NQ38 1064 aaPredicted RBP12.71□□□□□ -0.37
ARID1B-235ENST00000638000 HECW1Q76N89 1606 aa12.71□□□□□ -0.37
ARID1B-235ENST00000638000 NPM3O75607 178 aaKnown RBP12.71□□□□□ -0.38
ARID1B-235ENST00000638000 NUP160Q12769 1436 aa12.7□□□□□ -0.38
ARID1B-235ENST00000638000 RANGAP1P46060 587 aaPredicted RBP12.7□□□□□ -0.38
ARID1B-235ENST00000638000 PHLDB1Q86UU1 1377 aa12.69□□□□□ -0.38
ARID1B-235ENST00000638000 ACIN1Q9UKV3 1341 aaKnown RBP12.67□□□□□ -0.38
ARID1B-235ENST00000638000 U3KPZ7 1027 aaPredicted RBP12.67□□□□□ -0.38
ARID1B-235ENST00000638000 DHX57Q6P158 1386 aaKnown RBP12.67□□□□□ -0.38
ARID1B-235ENST00000638000 DISP1Q96F81 1524 aa12.66□□□□□ -0.38
ARID1B-235ENST00000638000 KIAA0556O60303 1618 aa12.66□□□□□ -0.38
ARID1B-235ENST00000638000 SUPT6HQ7KZ85 1726 aaKnown RBP12.66□□□□□ -0.38
ARID1B-235ENST00000638000 LRRIQ1Q96JM4 1722 aa12.66□□□□□ -0.38
ARID1B-235ENST00000638000 FGD6Q6ZV73 1430 aa12.66□□□□□ -0.38
ARID1B-235ENST00000638000 HNRNPUL2Q1KMD3 747 aaKnown RBP12.65□□□□□ -0.38
ARID1B-235ENST00000638000 MYOM3Q5VTT5 1437 aa12.64□□□□□ -0.39
ARID1B-235ENST00000638000 MIA2Q96PC5 1412 aa12.64□□□□□ -0.39
ARID1B-235ENST00000638000 TCOF1Q13428 1488 aaKnown RBP12.64□□□□□ -0.39
ARID1B-235ENST00000638000 EPRSP07814 1512 aaKnown RBP12.63□□□□□ -0.39
ARID1B-235ENST00000638000 AKNAQ7Z591 1439 aa12.63□□□□□ -0.39
ARID1B-235ENST00000638000 TTBK1Q5TCY1 1321 aaPredicted RBP12.63□□□□□ -0.39
ARID1B-235ENST00000638000 MTUS2Q5JR59 1369 aa12.63□□□□□ -0.39
ARID1B-235ENST00000638000 SETD5Q9C0A6 1442 aa12.62□□□□□ -0.39
ARID1B-235ENST00000638000 TIMELESSQ9UNS1 1208 aa12.62□□□□□ -0.39
ARID1B-235ENST00000638000 NCOA2Q15596 1464 aa12.61□□□□□ -0.39
ARID1B-235ENST00000638000 HFM1A2PYH4 1435 aa12.59□□□□□ -0.39
ARID1B-235ENST00000638000 CEP170Q5SW79 1584 aa12.59□□□□□ -0.39
ARID1B-235ENST00000638000 CARMIL2Q6F5E8 1435 aa12.58□□□□□ -0.4
ARID1B-235ENST00000638000 P3H3Q8IVL6 736 aa12.57□□□□□ -0.4
ARID1B-235ENST00000638000 RAB3GAP2Q9H2M9 1393 aa12.57□□□□□ -0.4
ARID1B-235ENST00000638000 RAPGEF6Q8TEU7 1601 aa12.57□□□□□ -0.4
ARID1B-235ENST00000638000 MAGI3Q5TCQ9 1506 aa12.56□□□□□ -0.4
ARID1B-235ENST00000638000 NUP153P49790 1475 aaKnown RBP12.54□□□□□ -0.4
ARID1B-235ENST00000638000 ADCY10Q96PN6 1610 aa12.53□□□□□ -0.4
ARID1B-235ENST00000638000 PTPN23Q9H3S7 1636 aa12.53□□□□□ -0.4
ARID1B-235ENST00000638000 MAPKBP1O60336 1514 aa12.53□□□□□ -0.4
ARID1B-235ENST00000638000 CHMP7Q8WUX9 453 aaPredicted RBP12.53□□□□□ -0.4
ARID1B-235ENST00000638000 CDK11AQ9UQ88 783 aaPredicted RBP12.53□□□□□ -0.4
ARID1B-235ENST00000638000 ZNF316A6NFI3 1004 aaPredicted RBP12.52□□□□□ -0.41
ARID1B-235ENST00000638000 ROCK1Q13464 1354 aa12.5□□□□□ -0.41
ARID1B-235ENST00000638000 UACAQ9BZF9 1416 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms