RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 CEP170Q5SW79 1584 aa26.44■■□□□ 1.82
CLN6-216ENST00000636876 CLASP1Q7Z460 1538 aa26.39■■□□□ 1.82
CLN6-216ENST00000636876 KIF21BO75037 1637 aa26.39■■□□□ 1.81
CLN6-216ENST00000636876 KIAA0586Q9BVV6 1533 aa26.3■■□□□ 1.8
CLN6-216ENST00000636876 ARAP1Q96P48 1450 aa26.29■■□□□ 1.8
CLN6-216ENST00000636876 GOLGA3Q08378 1498 aa26.27■■□□□ 1.8
CLN6-216ENST00000636876 CTTNBP2Q8WZ74 1663 aa26.22■■□□□ 1.79
CLN6-216ENST00000636876 IQGAP2Q13576 1575 aa26.21■■□□□ 1.79
CLN6-216ENST00000636876 SHROOM2Q13796 1616 aa26.21■■□□□ 1.79
CLN6-216ENST00000636876 CYB5RLQ6IPT4 315 aa26.2■■□□□ 1.78
CLN6-216ENST00000636876 EHMT2Q96KQ7 1210 aa26.2■■□□□ 1.78
CLN6-216ENST00000636876 JPH4Q96JJ6 628 aa26.18■■□□□ 1.78
CLN6-216ENST00000636876 UBTFP17480 764 aaKnown RBP26.14■■□□□ 1.78
CLN6-216ENST00000636876 PRG4Q92954 1404 aaPredicted RBP26.1■■□□□ 1.77
CLN6-216ENST00000636876 UGGT2Q9NYU1 1516 aa26.09■■□□□ 1.77
CLN6-216ENST00000636876 ERCC6L2Q5T890 1561 aa26.07■■□□□ 1.76
CLN6-216ENST00000636876 CARMIL2Q6F5E8 1435 aa26.01■■□□□ 1.75
CLN6-216ENST00000636876 DISP1Q96F81 1524 aa26.01■■□□□ 1.75
CLN6-216ENST00000636876 TNIKQ9UKE5 1360 aa26.01■■□□□ 1.75
CLN6-216ENST00000636876 LOC105371045A0A1W2PR82 267 aa26■■□□□ 1.75
CLN6-216ENST00000636876 KIAA0556O60303 1618 aa25.96■■□□□ 1.75
CLN6-216ENST00000636876 TRHP20396 242 aaPredicted RBP25.93■■□□□ 1.74
CLN6-216ENST00000636876 RANGAP1P46060 587 aaPredicted RBP25.93■■□□□ 1.74
CLN6-216ENST00000636876 SAMD9Q5K651 1589 aa25.92■■□□□ 1.74
CLN6-216ENST00000636876 EFCAB5A4FU69 1503 aa25.89■■□□□ 1.74
CLN6-216ENST00000636876 PTPRGP23470 1445 aa25.85■■□□□ 1.73
CLN6-216ENST00000636876 P3H3Q8IVL6 736 aa25.84■■□□□ 1.73
CLN6-216ENST00000636876 ARHGAP35Q9NRY4 1499 aa25.82■■□□□ 1.72
CLN6-216ENST00000636876 CLIP1P30622 1438 aa25.8■■□□□ 1.72
CLN6-216ENST00000636876 TTBK1Q5TCY1 1321 aaPredicted RBP25.8■■□□□ 1.72
CLN6-216ENST00000636876 FHOD3Q2V2M9 1422 aa25.8■■□□□ 1.72
CLN6-216ENST00000636876 CEP162Q5TB80 1403 aa25.79■■□□□ 1.72
CLN6-216ENST00000636876 UACAQ9BZF9 1416 aa25.69■■□□□ 1.7
CLN6-216ENST00000636876 PLB1Q6P1J6 1458 aa25.66■■□□□ 1.7
CLN6-216ENST00000636876 ADCY10Q96PN6 1610 aa25.66■■□□□ 1.7
CLN6-216ENST00000636876 ABCA8O94911 1581 aa25.65■■□□□ 1.7
CLN6-216ENST00000636876 UHRF1BP1LA0JNW5 1464 aa25.65■■□□□ 1.7
CLN6-216ENST00000636876 FMN1Q68DA7 1419 aa25.64■■□□□ 1.7
CLN6-216ENST00000636876 ABCC2Q92887 1545 aa25.63■■□□□ 1.69
CLN6-216ENST00000636876 RAPGEF6Q8TEU7 1601 aa25.59■■□□□ 1.69
CLN6-216ENST00000636876 KIF13AQ9H1H9 1805 aa25.54■■□□□ 1.68
CLN6-216ENST00000636876 KDM5BQ9UGL1 1544 aa25.52■■□□□ 1.68
CLN6-216ENST00000636876 NPM1P06748 294 aaKnown RBP eCLIP25.51■■□□□ 1.67
CLN6-216ENST00000636876 NUP153P49790 1475 aaKnown RBP25.51■■□□□ 1.67
CLN6-216ENST00000636876 PCF11O94913 1555 aaKnown RBP25.49■■□□□ 1.67
CLN6-216ENST00000636876 CASKIN1Q8WXD9 1431 aa25.49■■□□□ 1.67
CLN6-216ENST00000636876 HECW1Q76N89 1606 aa25.47■■□□□ 1.67
CLN6-216ENST00000636876 ZCCHC11Q5TAX3 1644 aaKnown RBP25.46■■□□□ 1.67
CLN6-216ENST00000636876 FYCO1Q9BQS8 1478 aa25.46■■□□□ 1.67
CLN6-216ENST00000636876 ATP10BO94823 1461 aa25.45■■□□□ 1.66
CLN6-216ENST00000636876 VPS8Q8N3P4 1428 aa25.45■■□□□ 1.66
CLN6-216ENST00000636876 ARID3CA6NKF2 412 aa25.44■■□□□ 1.66
CLN6-216ENST00000636876 ATP1B4Q9UN42 357 aaPredicted RBP25.44■■□□□ 1.66
CLN6-216ENST00000636876 MAPKBP1O60336 1514 aa25.41■■□□□ 1.66
CLN6-216ENST00000636876 EPRSP07814 1512 aaKnown RBP25.39■■□□□ 1.66
CLN6-216ENST00000636876 CDK13Q14004 1512 aaKnown RBP25.37■■□□□ 1.65
CLN6-216ENST00000636876 ASXL2Q76L83 1435 aa25.36■■□□□ 1.65
CLN6-216ENST00000636876 LRRIQ1Q96JM4 1722 aa25.35■■□□□ 1.65
CLN6-216ENST00000636876 CCDC18Q5T9S5 1454 aa25.34■■□□□ 1.65
CLN6-216ENST00000636876 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.34■■□□□ 1.65
CLN6-216ENST00000636876 HNRNPUL2Q1KMD3 747 aaKnown RBP25.34■■□□□ 1.65
CLN6-216ENST00000636876 WDR7Q9Y4E6 1490 aa25.3■■□□□ 1.64
CLN6-216ENST00000636876 PLEKHD1A6NEE1 506 aa25.25■■□□□ 1.63
CLN6-216ENST00000636876 DIP2BQ9P265 1576 aa25.24■■□□□ 1.63
CLN6-216ENST00000636876 ABCC10Q5T3U5 1492 aa25.24■■□□□ 1.63
CLN6-216ENST00000636876 CDK11AQ9UQ88 783 aaPredicted RBP25.24■■□□□ 1.63
CLN6-216ENST00000636876 AEBP2Q6ZN18 517 aaPredicted RBP25.21■■□□□ 1.63
CLN6-216ENST00000636876 CFAP43Q8NDM7 1665 aa25.2■■□□□ 1.62
CLN6-216ENST00000636876 TROQ12816 1431 aaPredicted RBP25.19■■□□□ 1.62
CLN6-216ENST00000636876 TIAM1Q13009 1591 aa25.18■■□□□ 1.62
CLN6-216ENST00000636876 MAP3K1Q13233 1512 aa25.18■■□□□ 1.62
CLN6-216ENST00000636876 KCNH8Q96L42 1107 aa25.18■■□□□ 1.62
CLN6-216ENST00000636876 TSPOAP1O95153 1857 aa25.17■■□□□ 1.62
CLN6-216ENST00000636876 MAGI3Q5TCQ9 1506 aa25.17■■□□□ 1.62
CLN6-216ENST00000636876 GLI2P10070 1586 aa25.16■■□□□ 1.62
CLN6-216ENST00000636876 FAM69CQ0P6D2 419 aa25.16■■□□□ 1.62
CLN6-216ENST00000636876 APLP2Q06481 763 aa25.13■■□□□ 1.61
CLN6-216ENST00000636876 MTUS2Q5JR59 1369 aa25.12■■□□□ 1.61
CLN6-216ENST00000636876 EHBP1L1Q8N3D4 1523 aa25.09■■□□□ 1.61
CLN6-216ENST00000636876 KIF14Q15058 1648 aa25.08■■□□□ 1.61
CLN6-216ENST00000636876 LRRC9Q6ZRR7 1453 aa25.08■■□□□ 1.6
CLN6-216ENST00000636876 ABCA9Q8IUA7 1624 aa25.08■■□□□ 1.6
CLN6-216ENST00000636876 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.06■■□□□ 1.66e-6■■■■□ 21.5
CLN6-216ENST00000636876 MAP3K4Q9Y6R4 1608 aa25.05■■□□□ 1.6
CLN6-216ENST00000636876 KANK4Q5T7N3 995 aaPredicted RBP25.04■■□□□ 1.6
CLN6-216ENST00000636876 KDM6BO15054 1643 aa25.04■■□□□ 1.6
CLN6-216ENST00000636876 TTC37Q6PGP7 1564 aa25.03■■□□□ 1.6
CLN6-216ENST00000636876 CD109Q6YHK3 1445 aa25.02■■□□□ 1.6
CLN6-216ENST00000636876 SUPT6HQ7KZ85 1726 aaKnown RBP24.97■■□□□ 1.59
CLN6-216ENST00000636876 PPRC1Q5VV67 1664 aaKnown RBP24.97■■□□□ 1.59
CLN6-216ENST00000636876 NCOA2Q15596 1464 aa24.94■■□□□ 1.58
CLN6-216ENST00000636876 MYO5CQ9NQX4 1742 aa24.92■■□□□ 1.58
CLN6-216ENST00000636876 TEX14Q8IWB6 1497 aa24.91■■□□□ 1.58
CLN6-216ENST00000636876 PLCH2O75038 1416 aa24.91■■□□□ 1.58
CLN6-216ENST00000636876 CCNB3Q8WWL7 1395 aa24.9■■□□□ 1.58
CLN6-216ENST00000636876 ARAP3Q8WWN8 1544 aa24.89■■□□□ 1.57
CLN6-216ENST00000636876 GPATCH8Q9UKJ3 1502 aaKnown RBP24.88■■□□□ 1.57
CLN6-216ENST00000636876 CDC42BPAQ5VT25 1732 aa24.88■■□□□ 1.57
CLN6-216ENST00000636876 PREX2Q70Z35 1606 aa24.87■■□□□ 1.57
CLN6-216ENST00000636876 CDC42BPBQ9Y5S2 1711 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms