RNA–Protein interactions for RNA: ENST00000634772.1

SMARCA2-228, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 810 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-228ENST00000634772 ADAMTS12P58397 1594 aa16.67■□□□□ 0.26
SMARCA2-228ENST00000634772 WRNQ14191 1432 aaPredicted RBP eCLIP16.62■□□□□ 0.25
SMARCA2-228ENST00000634772 SHROOM2Q13796 1616 aa16.61■□□□□ 0.25
SMARCA2-228ENST00000634772 FHAD1B1AJZ9 1412 aa16.59■□□□□ 0.25
SMARCA2-228ENST00000634772 BIVM-ERCC5R4GMW8 1640 aa16.58■□□□□ 0.24
SMARCA2-228ENST00000634772 TOP2BQ02880 1626 aa16.57■□□□□ 0.24
SMARCA2-228ENST00000634772 ERICH3Q5RHP9 1530 aa16.53■□□□□ 0.24
SMARCA2-228ENST00000634772 PRG4Q92954 1404 aaPredicted RBP16.5■□□□□ 0.23
SMARCA2-228ENST00000634772 KIF13AQ9H1H9 1805 aa16.49■□□□□ 0.23
SMARCA2-228ENST00000634772 ILDR1Q86SU0 546 aaPredicted RBP16.46■□□□□ 0.23
SMARCA2-228ENST00000634772 JPH4Q96JJ6 628 aa16.46■□□□□ 0.23
SMARCA2-228ENST00000634772 RUSC2Q8N2Y8 1516 aa16.44■□□□□ 0.22
SMARCA2-228ENST00000634772 ABCC10Q5T3U5 1492 aa16.41■□□□□ 0.22
SMARCA2-228ENST00000634772 MAPKBP1O60336 1514 aa16.37■□□□□ 0.21
SMARCA2-228ENST00000634772 FAM69CQ0P6D2 419 aa16.37■□□□□ 0.21
SMARCA2-228ENST00000634772 ADCY10Q96PN6 1610 aa16.37■□□□□ 0.21
SMARCA2-228ENST00000634772 DIP2BQ9P265 1576 aa16.36■□□□□ 0.21
SMARCA2-228ENST00000634772 KIAA0586Q9BVV6 1533 aa16.3■□□□□ 0.2
SMARCA2-228ENST00000634772 IGF1RP08069 1367 aa16.3■□□□□ 0.2
SMARCA2-228ENST00000634772 NPM1P06748 294 aaKnown RBP eCLIP16.29■□□□□ 0.2
SMARCA2-228ENST00000634772 KDM4FA0A1W2PPD8 638 aa16.27■□□□□ 0.2
SMARCA2-228ENST00000634772 KDM6BO15054 1643 aa16.24■□□□□ 0.19
SMARCA2-228ENST00000634772 KIF27Q86VH2 1401 aa16.23■□□□□ 0.19
SMARCA2-228ENST00000634772 CUL7Q14999 1698 aa16.21■□□□□ 0.19
SMARCA2-228ENST00000634772 PTPRGP23470 1445 aa16.19■□□□□ 0.18
SMARCA2-228ENST00000634772 TSPOAP1O95153 1857 aa16.18■□□□□ 0.18
SMARCA2-228ENST00000634772 MAPK8IP2Q13387 824 aaPredicted RBP16.18■□□□□ 0.18
SMARCA2-228ENST00000634772 CARMIL1Q5VZK9 1371 aa16.16■□□□□ 0.18
SMARCA2-228ENST00000634772 TTBK1Q5TCY1 1321 aaPredicted RBP16.16■□□□□ 0.18
SMARCA2-228ENST00000634772 ABCC2Q92887 1545 aa16.15■□□□□ 0.18
SMARCA2-228ENST00000634772 TNIKQ9UKE5 1360 aa16.14■□□□□ 0.17
SMARCA2-228ENST00000634772 ASXL2Q76L83 1435 aa16.14■□□□□ 0.17
SMARCA2-228ENST00000634772 PPRC1Q5VV67 1664 aaKnown RBP16.14■□□□□ 0.17
SMARCA2-228ENST00000634772 GLI2P10070 1586 aa16.11■□□□□ 0.17
SMARCA2-228ENST00000634772 UHRF1BP1LA0JNW5 1464 aa16.1■□□□□ 0.17
SMARCA2-228ENST00000634772 DISP1Q96F81 1524 aa16.1■□□□□ 0.17
SMARCA2-228ENST00000634772 CARMIL2Q6F5E8 1435 aa16.1■□□□□ 0.17
SMARCA2-228ENST00000634772 PLB1Q6P1J6 1458 aa16.1■□□□□ 0.17
SMARCA2-228ENST00000634772 IQGAP2Q13576 1575 aa16.09■□□□□ 0.17
SMARCA2-228ENST00000634772 COL17A1Q9UMD9 1497 aaPredicted RBP16.09■□□□□ 0.17
SMARCA2-228ENST00000634772 UACAQ9BZF9 1416 aa16.08■□□□□ 0.16
SMARCA2-228ENST00000634772 EPRSP07814 1512 aaKnown RBP16.04■□□□□ 0.16
SMARCA2-228ENST00000634772 KDM5BQ9UGL1 1544 aa16.04■□□□□ 0.16
SMARCA2-228ENST00000634772 ADGRL1O94910 1474 aa16.04■□□□□ 0.16
SMARCA2-228ENST00000634772 DMRT2Q9Y5R5 561 aa16.03■□□□□ 0.16
SMARCA2-228ENST00000634772 MAP3K4Q9Y6R4 1608 aa16.02■□□□□ 0.16
SMARCA2-228ENST00000634772 UGGT2Q9NYU1 1516 aa16.02■□□□□ 0.15
SMARCA2-228ENST00000634772 ZCCHC11Q5TAX3 1644 aaKnown RBP15.99■□□□□ 0.15
SMARCA2-228ENST00000634772 KIAA0556O60303 1618 aa15.98■□□□□ 0.15
SMARCA2-228ENST00000634772 RAPGEF2Q9Y4G8 1499 aa15.97■□□□□ 0.15
SMARCA2-228ENST00000634772 SCAF1Q9H7N4 1312 aaKnown RBP15.97■□□□□ 0.15
SMARCA2-228ENST00000634772 EEA1Q15075 1411 aa15.97■□□□□ 0.15
SMARCA2-228ENST00000634772 CSRNP3Q8WYN3 585 aa15.95■□□□□ 0.14
SMARCA2-228ENST00000634772 FAM9AQ8IZU1 332 aaPredicted RBP15.94■□□□□ 0.14
SMARCA2-228ENST00000634772 TEX14Q8IWB6 1497 aa15.94■□□□□ 0.14
SMARCA2-228ENST00000634772 WDR7Q9Y4E6 1490 aa15.92■□□□□ 0.14
SMARCA2-228ENST00000634772 HECW2Q9P2P5 1572 aa15.9■□□□□ 0.14
SMARCA2-228ENST00000634772 ABCA8O94911 1581 aa15.87■□□□□ 0.13
SMARCA2-228ENST00000634772 MAGI3Q5TCQ9 1506 aa15.86■□□□□ 0.13
SMARCA2-228ENST00000634772 LOC105371045A0A1W2PR82 267 aa15.86■□□□□ 0.13
SMARCA2-228ENST00000634772 CD109Q6YHK3 1445 aa15.85■□□□□ 0.13
SMARCA2-228ENST00000634772 CTTNBP2Q8WZ74 1663 aa15.82■□□□□ 0.12
SMARCA2-228ENST00000634772 CFAP43Q8NDM7 1665 aa15.81■□□□□ 0.12
SMARCA2-228ENST00000634772 KCNH8Q96L42 1107 aa15.81■□□□□ 0.12
SMARCA2-228ENST00000634772 GOLGA3Q08378 1498 aa15.8■□□□□ 0.12
SMARCA2-228ENST00000634772 PRXQ9BXM0 1461 aa15.79■□□□□ 0.12
SMARCA2-228ENST00000634772 KIF21BO75037 1637 aa15.76■□□□□ 0.11
SMARCA2-228ENST00000634772 ATP10BO94823 1461 aa15.74■□□□□ 0.11
SMARCA2-228ENST00000634772 ARAP3Q8WWN8 1544 aa15.73■□□□□ 0.11
SMARCA2-228ENST00000634772 ARID3CA6NKF2 412 aa15.73■□□□□ 0.11
SMARCA2-228ENST00000634772 P3H3Q8IVL6 736 aa15.7■□□□□ 0.1
SMARCA2-228ENST00000634772 ABCA9Q8IUA7 1624 aa15.68■□□□□ 0.1
SMARCA2-228ENST00000634772 UBTFP17480 764 aaKnown RBP15.67■□□□□ 0.1
SMARCA2-228ENST00000634772 ADAMTSL3P82987 1691 aa15.66■□□□□ 0.1
SMARCA2-228ENST00000634772 PTPRMP28827 1452 aa15.65■□□□□ 0.1
SMARCA2-228ENST00000634772 RAPGEF3O95398 923 aa15.65■□□□□ 0.1
SMARCA2-228ENST00000634772 SAMD9Q5K651 1589 aa15.65■□□□□ 0.1
SMARCA2-228ENST00000634772 FRMPD1Q5SYB0 1578 aa15.65■□□□□ 0.1
SMARCA2-228ENST00000634772 EHMT2Q96KQ7 1210 aa15.64■□□□□ 0.09
SMARCA2-228ENST00000634772 PHLDB1Q86UU1 1377 aa15.62■□□□□ 0.09
SMARCA2-228ENST00000634772 NEO1Q92859 1461 aa15.61■□□□□ 0.09
SMARCA2-228ENST00000634772 RAPGEF6Q8TEU7 1601 aa15.61■□□□□ 0.09
SMARCA2-228ENST00000634772 NUP153P49790 1475 aaKnown RBP15.59■□□□□ 0.09
SMARCA2-228ENST00000634772 FBXO41Q8TF61 875 aa15.59■□□□□ 0.09
SMARCA2-228ENST00000634772 BCORL1Q5H9F3 1711 aa15.58■□□□□ 0.08
SMARCA2-228ENST00000634772 MADDQ8WXG6 1647 aa15.57■□□□□ 0.08
SMARCA2-228ENST00000634772 LMTK3Q96Q04 1460 aa15.57■□□□□ 0.08
SMARCA2-228ENST00000634772 PPP4R3CPQ6ZMV5 832 aa15.55■□□□□ 0.08
SMARCA2-228ENST00000634772 PCF11O94913 1555 aaKnown RBP15.54■□□□□ 0.08
SMARCA2-228ENST00000634772 FHOD3Q2V2M9 1422 aa15.54■□□□□ 0.08
SMARCA2-228ENST00000634772 ARHGEF40Q8TER5 1519 aa15.53■□□□□ 0.08
SMARCA2-228ENST00000634772 DCAF8L1A6NGE4 600 aa15.52■□□□□ 0.08
SMARCA2-228ENST00000634772 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.52■□□□□ 0.08
SMARCA2-228ENST00000634772 HNRNPUL2Q1KMD3 747 aaKnown RBP15.52■□□□□ 0.08
SMARCA2-228ENST00000634772 ARID4BQ4LE39 1312 aaPredicted RBP15.51■□□□□ 0.07
SMARCA2-228ENST00000634772 DENND4BO75064 1496 aaPredicted RBP15.51■□□□□ 0.07
SMARCA2-228ENST00000634772 RICTORQ6R327 1708 aa15.51■□□□□ 0.07
SMARCA2-228ENST00000634772 SIGLEC1Q9BZZ2 1709 aa15.5■□□□□ 0.07
SMARCA2-228ENST00000634772 AKNAQ7Z591 1439 aa15.5■□□□□ 0.07
SMARCA2-228ENST00000634772 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms