RNA–Protein interactions for RNA: ENST00000634772.1

SMARCA2-228, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 810 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-228ENST00000634772 AEBP2Q6ZN18 517 aaPredicted RBP23.75■■□□□ 1.39
SMARCA2-228ENST00000634772 NISCHQ9Y2I1 1504 aa23.38■■□□□ 1.33
SMARCA2-228ENST00000634772 CHIC1Q5VXU3 224 aa22.31■■□□□ 1.16
SMARCA2-228ENST00000634772 ABCC9O60706 1549 aa21.32■■□□□ 1
SMARCA2-228ENST00000634772 CCDC180Q9P1Z9 1646 aa21.02■□□□□ 0.96
SMARCA2-228ENST00000634772 DNAJC5BQ9UF47 199 aa20.29■□□□□ 0.84
SMARCA2-228ENST00000634772 SENP3Q9H4L4 574 aaPredicted RBP20.26■□□□□ 0.83
SMARCA2-228ENST00000634772 RB1CC1Q8TDY2 1594 aa20.12■□□□□ 0.81
SMARCA2-228ENST00000634772 PHF23Q9BUL5 403 aaPredicted RBP20.01■□□□□ 0.79
SMARCA2-228ENST00000634772 NACADO15069 1562 aa19.95■□□□□ 0.78
SMARCA2-228ENST00000634772 PABPN1Q86U42 306 aaKnown RBP eCLIP19.82■□□□□ 0.76
SMARCA2-228ENST00000634772 DCAF8L2P0C7V8 631 aa19.77■□□□□ 0.76
SMARCA2-228ENST00000634772 UNC13AQ9UPW8 1703 aa19.69■□□□□ 0.74
SMARCA2-228ENST00000634772 BICRAQ9NZM4 1560 aa19.65■□□□□ 0.74
SMARCA2-228ENST00000634772 MYO15BQ96JP2 1530 aa19.61■□□□□ 0.73
SMARCA2-228ENST00000634772 ZCCHC6Q5VYS8 1495 aaKnown RBP19.34■□□□□ 0.69
SMARCA2-228ENST00000634772 DCAF1Q9Y4B6 1507 aa19.27■□□□□ 0.68
SMARCA2-228ENST00000634772 SHROOM4Q9ULL8 1493 aa19.27■□□□□ 0.67
SMARCA2-228ENST00000634772 CC2D2AQ9P2K1 1620 aa19.23■□□□□ 0.67
SMARCA2-228ENST00000634772 CECR2Q9BXF3 1484 aa19.22■□□□□ 0.67
SMARCA2-228ENST00000634772 SCRIBQ14160 1630 aa19.18■□□□□ 0.66
SMARCA2-228ENST00000634772 EIF4G1Q04637 1599 aaKnown RBP19.14■□□□□ 0.65
SMARCA2-228ENST00000634772 FOXD1Q16676 465 aa18.95■□□□□ 0.62
SMARCA2-228ENST00000634772 DNAJC5Q9H3Z4 198 aa18.95■□□□□ 0.62
SMARCA2-228ENST00000634772 NCAPD3P42695 1498 aa18.46■□□□□ 0.54
SMARCA2-228ENST00000634772 CUX2O14529 1486 aa18.44■□□□□ 0.54
SMARCA2-228ENST00000634772 ATAD2BQ9ULI0 1458 aa18.38■□□□□ 0.53
SMARCA2-228ENST00000634772 ERCC6Q03468 1493 aa18.36■□□□□ 0.53
SMARCA2-228ENST00000634772 NESP48681 1621 aa18.27■□□□□ 0.52
SMARCA2-228ENST00000634772 SMARCA4P51532 1647 aa18.27■□□□□ 0.52
SMARCA2-228ENST00000634772 HMGXB3Q12766 1538 aa18.27■□□□□ 0.51
SMARCA2-228ENST00000634772 SMARCA2P51531 1590 aa18.25■□□□□ 0.51
SMARCA2-228ENST00000634772 BAZ1BQ9UIG0 1483 aaKnown RBP18.14■□□□□ 0.5
SMARCA2-228ENST00000634772 THOC2Q8NI27 1593 aaKnown RBP18.12■□□□□ 0.49
SMARCA2-228ENST00000634772 BAZ1AQ9NRL2 1556 aaPredicted RBP18.12■□□□□ 0.49
SMARCA2-228ENST00000634772 PEG3Q9GZU2 1588 aa18.11■□□□□ 0.49
SMARCA2-228ENST00000634772 MROH2BQ7Z745 1585 aa18.04■□□□□ 0.48
SMARCA2-228ENST00000634772 LAMC3Q9Y6N6 1575 aa18.04■□□□□ 0.48
SMARCA2-228ENST00000634772 KIF21AQ7Z4S6 1674 aa17.97■□□□□ 0.47
SMARCA2-228ENST00000634772 PDS5BQ9NTI5 1447 aa17.92■□□□□ 0.46
SMARCA2-228ENST00000634772 CADPSQ9ULU8 1353 aa17.87■□□□□ 0.45
SMARCA2-228ENST00000634772 MRC2Q9UBG0 1479 aa17.82■□□□□ 0.44
SMARCA2-228ENST00000634772 WDR62O43379 1518 aa17.81■□□□□ 0.44
SMARCA2-228ENST00000634772 WIZO95785 1651 aa17.78■□□□□ 0.44
SMARCA2-228ENST00000634772 MSH5O43196 834 aa17.78■□□□□ 0.44
SMARCA2-228ENST00000634772 POTEDQ86YR6 584 aa17.78■□□□□ 0.44
SMARCA2-228ENST00000634772 TRIM41Q8WV44 630 aa17.78■□□□□ 0.44
SMARCA2-228ENST00000634772 PLPPR3Q6T4P5 718 aa17.73■□□□□ 0.43
SMARCA2-228ENST00000634772 CEP164Q9UPV0 1460 aa17.69■□□□□ 0.42
SMARCA2-228ENST00000634772 PIAS4Q8N2W9 510 aaPredicted RBP17.68■□□□□ 0.42
SMARCA2-228ENST00000634772 FANCD2Q9BXW9 1451 aa17.67■□□□□ 0.42
SMARCA2-228ENST00000634772 CFTRP13569 1480 aa17.63■□□□□ 0.41
SMARCA2-228ENST00000634772 URB2Q14146 1524 aaKnown RBP17.57■□□□□ 0.4
SMARCA2-228ENST00000634772 RSF1Q96T23 1441 aaPredicted RBP17.57■□□□□ 0.4
SMARCA2-228ENST00000634772 PPP6R1Q9UPN7 881 aa17.56■□□□□ 0.4
SMARCA2-228ENST00000634772 OSCARQ8IYS5 282 aa17.54■□□□□ 0.4
SMARCA2-228ENST00000634772 TOP2AP11388 1531 aaKnown RBP17.53■□□□□ 0.4
SMARCA2-228ENST00000634772 ADRA2BP18089 450 aa17.52■□□□□ 0.4
SMARCA2-228ENST00000634772 ZNF608Q9ULD9 1512 aaPredicted RBP17.41■□□□□ 0.38
SMARCA2-228ENST00000634772 RIMBP3CA6NJZ7 1639 aa17.38■□□□□ 0.37
SMARCA2-228ENST00000634772 RIMBP3BA6NNM3 1639 aa17.38■□□□□ 0.37
SMARCA2-228ENST00000634772 RIMBP3Q9UFD9 1639 aa17.38■□□□□ 0.37
SMARCA2-228ENST00000634772 CCDC88BA6NC98 1476 aa17.36■□□□□ 0.37
SMARCA2-228ENST00000634772 IFT140Q96RY7 1462 aa17.36■□□□□ 0.37
SMARCA2-228ENST00000634772 PRDM2Q13029 1718 aa17.34■□□□□ 0.37
SMARCA2-228ENST00000634772 TOPBP1Q92547 1522 aa17.31■□□□□ 0.36
SMARCA2-228ENST00000634772 SUPT5HO00267 1087 aaKnown RBP17.3■□□□□ 0.36
SMARCA2-228ENST00000634772 ARHGEF11O15085 1522 aa17.3■□□□□ 0.36
SMARCA2-228ENST00000634772 EIF4G3O43432 1585 aaKnown RBP17.26■□□□□ 0.35
SMARCA2-228ENST00000634772 DNMBPQ6XZF7 1577 aa17.21■□□□□ 0.35
SMARCA2-228ENST00000634772 ABCC8Q09428 1581 aa17.19■□□□□ 0.34
SMARCA2-228ENST00000634772 AQRO60306 1485 aaKnown RBP eCLIP17.19■□□□□ 0.34
SMARCA2-228ENST00000634772 TARBP1Q13395 1621 aaKnown RBP17.19■□□□□ 0.34
SMARCA2-228ENST00000634772 CYB5RLQ6IPT4 315 aa17.16■□□□□ 0.34
SMARCA2-228ENST00000634772 ARAP1Q96P48 1450 aa17.15■□□□□ 0.34
SMARCA2-228ENST00000634772 CHD1O14646 1710 aa17.14■□□□□ 0.33
SMARCA2-228ENST00000634772 POLA1P09884 1462 aaPredicted RBP17.13■□□□□ 0.33
SMARCA2-228ENST00000634772 RAD54L2Q9Y4B4 1467 aa17.09■□□□□ 0.33
SMARCA2-228ENST00000634772 FBLN2P98095 1184 aa17.07■□□□□ 0.32
SMARCA2-228ENST00000634772 TDRD9Q8NDG6 1382 aaKnown RBP17.05■□□□□ 0.32
SMARCA2-228ENST00000634772 SOGA1O94964 1423 aa17.03■□□□□ 0.32
SMARCA2-228ENST00000634772 SNAPC4Q5SXM2 1469 aa17.01■□□□□ 0.31
SMARCA2-228ENST00000634772 TRHP20396 242 aaPredicted RBP17.01■□□□□ 0.31
SMARCA2-228ENST00000634772 CLASP1Q7Z460 1538 aa17■□□□□ 0.31
SMARCA2-228ENST00000634772 FGD5Q6ZNL6 1462 aa16.99■□□□□ 0.31
SMARCA2-228ENST00000634772 CUX1P39880 1505 aa16.96■□□□□ 0.3
SMARCA2-228ENST00000634772 WDR97A6NE52 1622 aa16.93■□□□□ 0.3
SMARCA2-228ENST00000634772 MAGI1Q96QZ7 1491 aaPredicted RBP16.92■□□□□ 0.3
SMARCA2-228ENST00000634772 CHMP7Q8WUX9 453 aaPredicted RBP16.9■□□□□ 0.3
SMARCA2-228ENST00000634772 GRIN2BQ13224 1484 aa16.9■□□□□ 0.3
SMARCA2-228ENST00000634772 SYNJ1O43426 1573 aa16.89■□□□□ 0.3
SMARCA2-228ENST00000634772 SYNJ2O15056 1496 aa16.87■□□□□ 0.29
SMARCA2-228ENST00000634772 GAPVD1Q14C86 1478 aa16.8■□□□□ 0.28
SMARCA2-228ENST00000634772 PBRM1Q86U86 1689 aa16.79■□□□□ 0.28
SMARCA2-228ENST00000634772 ABCA5Q8WWZ7 1642 aa16.78■□□□□ 0.28
SMARCA2-228ENST00000634772 ABCA10Q8WWZ4 1543 aa16.77■□□□□ 0.28
SMARCA2-228ENST00000634772 ERCC6L2Q5T890 1561 aa16.75■□□□□ 0.27
SMARCA2-228ENST00000634772 GRIN2AQ12879 1464 aa16.7■□□□□ 0.26
SMARCA2-228ENST00000634772 NUP160Q12769 1436 aa16.68■□□□□ 0.26
SMARCA2-228ENST00000634772 CEP170Q5SW79 1584 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms