RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, human

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMN2-215	ENST00000628696	KIF27	Q86VH2	1401 aa		33.21	■■■□□ 2.91
SMN2-215	ENST00000628696	IGF1R	P08069	1367 aa		33.21	■■■□□ 2.91
SMN2-215	ENST00000628696	KIF13A	Q9H1H9	1805 aa		33.16	■■■□□ 2.9
SMN2-215	ENST00000628696	NPM1	P06748	294 aa	Known RBP eCLIP	33.15	■■■□□ 2.9
SMN2-215	ENST00000628696	CUL7	Q14999	1698 aa		33.13	■■■□□ 2.89
SMN2-215	ENST00000628696	KIAA0586	Q9BVV6	1533 aa		33.12	■■■□□ 2.89
SMN2-215	ENST00000628696	FAM69C	Q0P6D2	419 aa		33.04	■■■□□ 2.88
SMN2-215	ENST00000628696	CARMIL1	Q5VZK9	1371 aa		33.01	■■■□□ 2.88
SMN2-215	ENST00000628696	ADCY10	Q96PN6	1610 aa		33.01	■■■□□ 2.87
SMN2-215	ENST00000628696	ABCC10	Q5T3U5	1492 aa		32.98	■■■□□ 2.87
SMN2-215	ENST00000628696	MAPKBP1	O60336	1514 aa		32.96	■■■□□ 2.87
SMN2-215	ENST00000628696	TTBK1	Q5TCY1	1321 aa	Predicted RBP	32.96	■■■□□ 2.87
SMN2-215	ENST00000628696	PTPRG	P23470	1445 aa		32.89	■■■□□ 2.86
SMN2-215	ENST00000628696	DIP2B	Q9P265	1576 aa		32.88	■■■□□ 2.85
SMN2-215	ENST00000628696	CARMIL2	Q6F5E8	1435 aa		32.83	■■■□□ 2.85
SMN2-215	ENST00000628696	TNIK	Q9UKE5	1360 aa		32.8	■■■□□ 2.84
SMN2-215	ENST00000628696	TSPOAP1	O95153	1857 aa		32.79	■■■□□ 2.84
SMN2-215	ENST00000628696	IQGAP2	Q13576	1575 aa		32.79	■■■□□ 2.84
SMN2-215	ENST00000628696	ABCC2	Q92887	1545 aa		32.68	■■■□□ 2.82
SMN2-215	ENST00000628696	RAPGEF2	Q9Y4G8	1499 aa		32.67	■■■□□ 2.82
SMN2-215	ENST00000628696	KDM6B	O15054	1643 aa		32.67	■■■□□ 2.82
SMN2-215	ENST00000628696	DISP1	Q96F81	1524 aa		32.63	■■■□□ 2.81
SMN2-215	ENST00000628696	ASXL2	Q76L83	1435 aa		32.6	■■■□□ 2.81
SMN2-215	ENST00000628696	UACA	Q9BZF9	1416 aa		32.6	■■■□□ 2.81
SMN2-215	ENST00000628696	UHRF1BP1L	A0JNW5	1464 aa		32.58	■■■□□ 2.81
SMN2-215	ENST00000628696	PLB1	Q6P1J6	1458 aa		32.57	■■■□□ 2.8
SMN2-215	ENST00000628696	UGGT2	Q9NYU1	1516 aa		32.56	■■■□□ 2.8
SMN2-215	ENST00000628696	GLI2	P10070	1586 aa		32.49	■■■□□ 2.79
SMN2-215	ENST00000628696	KIAA0556	O60303	1618 aa		32.48	■■■□□ 2.79
SMN2-215	ENST00000628696	KDM5B	Q9UGL1	1544 aa		32.45	■■■□□ 2.78
SMN2-215	ENST00000628696	PPRC1	Q5VV67	1664 aa	Known RBP	32.43	■■■□□ 2.78
SMN2-215	ENST00000628696	ZCCHC11	Q5TAX3	1644 aa	Known RBP	32.42	■■■□□ 2.78
SMN2-215	ENST00000628696	CTTNBP2	Q8WZ74	1663 aa		32.42	■■■□□ 2.78
SMN2-215	ENST00000628696	KDM4F	A0A1W2PPD8	638 aa		32.41	■■■□□ 2.78
SMN2-215	ENST00000628696	EPRS	P07814	1512 aa	Known RBP	32.39	■■■□□ 2.78
SMN2-215	ENST00000628696	MAP3K4	Q9Y6R4	1608 aa		32.32	■■■□□ 2.76
SMN2-215	ENST00000628696	GOLGA3	Q08378	1498 aa		32.31	■■■□□ 2.76
SMN2-215	ENST00000628696	PRX	Q9BXM0	1461 aa		32.27	■■■□□ 2.76
SMN2-215	ENST00000628696	TEX14	Q8IWB6	1497 aa		32.26	■■■□□ 2.75
SMN2-215	ENST00000628696	WDR7	Q9Y4E6	1490 aa		32.25	■■■□□ 2.75
SMN2-215	ENST00000628696	COL17A1	Q9UMD9	1497 aa	Predicted RBP	32.24	■■■□□ 2.75
SMN2-215	ENST00000628696	KCNH8	Q96L42	1107 aa		32.21	■■■□□ 2.75
SMN2-215	ENST00000628696	ABCA8	O94911	1581 aa		32.19	■■■□□ 2.74
SMN2-215	ENST00000628696	P3H3	Q8IVL6	736 aa		32.15	■■■□□ 2.74
SMN2-215	ENST00000628696	FAM9A	Q8IZU1	332 aa	Predicted RBP	32.14	■■■□□ 2.74
SMN2-215	ENST00000628696	ADGRL1	O94910	1474 aa		32.11	■■■□□ 2.73
SMN2-215	ENST00000628696	CD109	Q6YHK3	1445 aa		32.1	■■■□□ 2.73
SMN2-215	ENST00000628696	ARID3C	A6NKF2	412 aa		32.1	■■■□□ 2.73
SMN2-215	ENST00000628696	CSRNP3	Q8WYN3	585 aa		32.07	■■■□□ 2.72
SMN2-215	ENST00000628696	CFAP43	Q8NDM7	1665 aa		32.07	■■■□□ 2.72
SMN2-215	ENST00000628696	MAGI3	Q5TCQ9	1506 aa		32.03	■■■□□ 2.72
SMN2-215	ENST00000628696	ATP10B	O94823	1461 aa		31.97	■■■□□ 2.71
SMN2-215	ENST00000628696	RANGAP1	P46060	587 aa	Predicted RBP	31.93	■■■□□ 2.7
SMN2-215	ENST00000628696	SAMD9	Q5K651	1589 aa		31.9	■■■□□ 2.7
SMN2-215	ENST00000628696	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	31.88	■■■□□ 2.69
SMN2-215	ENST00000628696	HNRNPUL2	Q1KMD3	747 aa	Known RBP	31.88	■■■□□ 2.69
SMN2-215	ENST00000628696	RAPGEF6	Q8TEU7	1601 aa		31.86	■■■□□ 2.69
SMN2-215	ENST00000628696	EEA1	Q15075	1411 aa		31.83	■■■□□ 2.69
SMN2-215	ENST00000628696	ARAP3	Q8WWN8	1544 aa		31.79	■■■□□ 2.68
SMN2-215	ENST00000628696	ABCA9	Q8IUA7	1624 aa		31.78	■■■□□ 2.68
SMN2-215	ENST00000628696	KIF21B	O75037	1637 aa		31.76	■■■□□ 2.67
SMN2-215	ENST00000628696	FHOD3	Q2V2M9	1422 aa		31.75	■■■□□ 2.67
SMN2-215	ENST00000628696	NUP153	P49790	1475 aa	Known RBP	31.72	■■■□□ 2.67
SMN2-215	ENST00000628696	PHLDB1	Q86UU1	1377 aa		31.71	■■■□□ 2.67
SMN2-215	ENST00000628696	HECW2	Q9P2P5	1572 aa		31.71	■■■□□ 2.67
SMN2-215	ENST00000628696	RAPGEF3	O95398	923 aa		31.69	■■■□□ 2.66
SMN2-215	ENST00000628696	PLEKHD1	A6NEE1	506 aa		31.64	■■■□□ 2.66
SMN2-215	ENST00000628696	NEO1	Q92859	1461 aa		31.64	■■■□□ 2.66
SMN2-215	ENST00000628696	EHMT2	Q96KQ7	1210 aa		31.6	■■■□□ 2.65
SMN2-215	ENST00000628696	ILDR1	Q86SU0	546 aa	Predicted RBP	31.59	■■■□□ 2.65
SMN2-215	ENST00000628696	EFCAB5	A4FU69	1503 aa		31.57	■■■□□ 2.64
SMN2-215	ENST00000628696	FRMPD1	Q5SYB0	1578 aa		31.51	■■■□□ 2.64
SMN2-215	ENST00000628696	ARID4B	Q4LE39	1312 aa	Predicted RBP	31.51	■■■□□ 2.64
SMN2-215	ENST00000628696	UBTF	P17480	764 aa	Known RBP	31.51	■■■□□ 2.63
SMN2-215	ENST00000628696	ADAMTSL3	P82987	1691 aa		31.47	■■■□□ 2.63
SMN2-215	ENST00000628696	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	31.46	■■■□□ 2.63
SMN2-215	ENST00000628696	ATP1B4	Q9UN42	357 aa	Predicted RBP	31.46	■■■□□ 2.63
SMN2-215	ENST00000628696	AKNA	Q7Z591	1439 aa		31.46	■■■□□ 2.63
SMN2-215	ENST00000628696	DENND4B	O75064	1496 aa	Predicted RBP	31.46	■■■□□ 2.63
SMN2-215	ENST00000628696	FANCA	O15360	1455 aa		31.44	■■■□□ 2.62
SMN2-215	ENST00000628696	CDK13	Q14004	1512 aa	Known RBP	31.44	■■■□□ 2.62
SMN2-215	ENST00000628696	PTPRM	P28827	1452 aa		31.43	■■■□□ 2.62
SMN2-215	ENST00000628696	TTC37	Q6PGP7	1564 aa		31.42	■■■□□ 2.62
SMN2-215	ENST00000628696	BCORL1	Q5H9F3	1711 aa		31.41	■■■□□ 2.62
SMN2-215	ENST00000628696	CFAP74	Q9C0B2	1584 aa		31.41	■■■□□ 2.62
SMN2-215	ENST00000628696	RICTOR	Q6R327	1708 aa		31.4	■■■□□ 2.62
SMN2-215	ENST00000628696	CHIC1	Q5VXU3	224 aa		31.37	■■■□□ 2.61
SMN2-215	ENST00000628696	ARHGEF40	Q8TER5	1519 aa		31.36	■■■□□ 2.61
SMN2-215	ENST00000628696	MADD	Q8WXG6	1647 aa		31.35	■■■□□ 2.61
SMN2-215	ENST00000628696	FMN1	Q68DA7	1419 aa		31.32	■■■□□ 2.61
SMN2-215	ENST00000628696	ARHGAP35	Q9NRY4	1499 aa		31.3	■■■□□ 2.6
SMN2-215	ENST00000628696	HECW1	Q76N89	1606 aa		31.29	■■■□□ 2.6
SMN2-215	ENST00000628696	PLCH2	O75038	1416 aa		31.27	■■■□□ 2.6
SMN2-215	ENST00000628696	CDK11A	Q9UQ88	783 aa	Predicted RBP	31.27	■■■□□ 2.6
SMN2-215	ENST00000628696	RIMS1	Q86UR5	1692 aa	Known RBP	31.26	■■■□□ 2.6
SMN2-215	ENST00000628696	ZMYM4	Q5VZL5	1548 aa		31.25	■■■□□ 2.59
SMN2-215	ENST00000628696	ZFYVE16	Q7Z3T8	1539 aa		31.25	■■■□□ 2.59
SMN2-215	ENST00000628696	SCAPER	Q9BY12	1400 aa		31.24	■■■□□ 2.59
SMN2-215	ENST00000628696	PLPPR3	Q6T4P5	718 aa		31.24	■■■□□ 2.59
SMN2-215	ENST00000628696	YEATS2	Q9ULM3	1422 aa		31.24	■■■□□ 2.59

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