RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 NUP160Q12769 1436 aa13.46□□□□□ -0.26
CHD2-213ENST00000628118 CLASP1Q7Z460 1538 aa13.44□□□□□ -0.26
CHD2-213ENST00000628118 RUSC2Q8N2Y8 1516 aa13.43□□□□□ -0.26
CHD2-213ENST00000628118 RAPGEF2Q9Y4G8 1499 aa13.4□□□□□ -0.26
CHD2-213ENST00000628118 CSRNP3Q8WYN3 585 aa13.39□□□□□ -0.27
CHD2-213ENST00000628118 CEP170Q5SW79 1584 aa13.39□□□□□ -0.27
CHD2-213ENST00000628118 PRXQ9BXM0 1461 aa13.37□□□□□ -0.27
CHD2-213ENST00000628118 KIAA0586Q9BVV6 1533 aa13.35□□□□□ -0.27
CHD2-213ENST00000628118 ARHGEF11O15085 1522 aa13.34□□□□□ -0.27
CHD2-213ENST00000628118 RIMBP3CA6NJZ7 1639 aa13.32□□□□□ -0.28
CHD2-213ENST00000628118 RIMBP3BA6NNM3 1639 aa13.32□□□□□ -0.28
CHD2-213ENST00000628118 SHROOM2Q13796 1616 aa13.32□□□□□ -0.28
CHD2-213ENST00000628118 RIMBP3Q9UFD9 1639 aa13.32□□□□□ -0.28
CHD2-213ENST00000628118 JPH4Q96JJ6 628 aa13.31□□□□□ -0.28
CHD2-213ENST00000628118 IQGAP2Q13576 1575 aa13.27□□□□□ -0.29
CHD2-213ENST00000628118 KIF21BO75037 1637 aa13.27□□□□□ -0.29
CHD2-213ENST00000628118 PRG4Q92954 1404 aaPredicted RBP13.25□□□□□ -0.29
CHD2-213ENST00000628118 FAM9AQ8IZU1 332 aaPredicted RBP13.25□□□□□ -0.29
CHD2-213ENST00000628118 CTTNBP2Q8WZ74 1663 aa13.24□□□□□ -0.29
CHD2-213ENST00000628118 ARAP1Q96P48 1450 aa13.23□□□□□ -0.29
CHD2-213ENST00000628118 UGGT2Q9NYU1 1516 aa13.23□□□□□ -0.29
CHD2-213ENST00000628118 CARMIL2Q6F5E8 1435 aa13.22□□□□□ -0.29
CHD2-213ENST00000628118 CYB5RLQ6IPT4 315 aa13.2□□□□□ -0.3
CHD2-213ENST00000628118 GOLGA3Q08378 1498 aa13.2□□□□□ -0.3
CHD2-213ENST00000628118 ERCC6L2Q5T890 1561 aa13.19□□□□□ -0.3
CHD2-213ENST00000628118 PPP4R3CPQ6ZMV5 832 aa13.18□□□□□ -0.3
CHD2-213ENST00000628118 TNIKQ9UKE5 1360 aa13.17□□□□□ -0.3
CHD2-213ENST00000628118 DISP1Q96F81 1524 aa13.15□□□□□ -0.3
CHD2-213ENST00000628118 PTPRGP23470 1445 aa13.13□□□□□ -0.31
CHD2-213ENST00000628118 KIAA0556O60303 1618 aa13.13□□□□□ -0.31
CHD2-213ENST00000628118 UBTFP17480 764 aaKnown RBP13.13□□□□□ -0.31
CHD2-213ENST00000628118 SCAF1Q9H7N4 1312 aaKnown RBP13.12□□□□□ -0.31
CHD2-213ENST00000628118 EFCAB5A4FU69 1503 aa13.08□□□□□ -0.31
CHD2-213ENST00000628118 SAMD9Q5K651 1589 aa13.08□□□□□ -0.32
CHD2-213ENST00000628118 UHRF1BP1LA0JNW5 1464 aa13.06□□□□□ -0.32
CHD2-213ENST00000628118 UACAQ9BZF9 1416 aa13.05□□□□□ -0.32
CHD2-213ENST00000628118 NPM1P06748 294 aaKnown RBP eCLIP13.04□□□□□ -0.32
CHD2-213ENST00000628118 MAPK8IP2Q13387 824 aaPredicted RBP13.02□□□□□ -0.33
CHD2-213ENST00000628118 ABCC2Q92887 1545 aa13.02□□□□□ -0.33
CHD2-213ENST00000628118 ADCY10Q96PN6 1610 aa13.02□□□□□ -0.33
CHD2-213ENST00000628118 EHMT2Q96KQ7 1210 aa13.01□□□□□ -0.33
CHD2-213ENST00000628118 TTBK1Q5TCY1 1321 aaPredicted RBP13□□□□□ -0.33
CHD2-213ENST00000628118 ABCA8O94911 1581 aa12.99□□□□□ -0.33
CHD2-213ENST00000628118 MAPKBP1O60336 1514 aa12.98□□□□□ -0.33
CHD2-213ENST00000628118 P3H3Q8IVL6 736 aa12.98□□□□□ -0.33
CHD2-213ENST00000628118 ARHGAP35Q9NRY4 1499 aa12.97□□□□□ -0.33
CHD2-213ENST00000628118 FHOD3Q2V2M9 1422 aa12.97□□□□□ -0.33
CHD2-213ENST00000628118 FMN1Q68DA7 1419 aa12.97□□□□□ -0.33
CHD2-213ENST00000628118 RANGAP1P46060 587 aaPredicted RBP12.97□□□□□ -0.33
CHD2-213ENST00000628118 KDM5BQ9UGL1 1544 aa12.97□□□□□ -0.33
CHD2-213ENST00000628118 PLB1Q6P1J6 1458 aa12.97□□□□□ -0.33
CHD2-213ENST00000628118 CLIP1P30622 1438 aa12.95□□□□□ -0.34
CHD2-213ENST00000628118 RAPGEF6Q8TEU7 1601 aa12.94□□□□□ -0.34
CHD2-213ENST00000628118 ZCCHC11Q5TAX3 1644 aaKnown RBP12.91□□□□□ -0.34
CHD2-213ENST00000628118 TRHP20396 242 aaPredicted RBP12.9□□□□□ -0.34
CHD2-213ENST00000628118 ABCC10Q5T3U5 1492 aa12.9□□□□□ -0.34
CHD2-213ENST00000628118 CEP162Q5TB80 1403 aa12.89□□□□□ -0.35
CHD2-213ENST00000628118 ASXL2Q76L83 1435 aa12.89□□□□□ -0.35
CHD2-213ENST00000628118 LOC105371045A0A1W2PR82 267 aa12.89□□□□□ -0.35
CHD2-213ENST00000628118 ATP10BO94823 1461 aa12.88□□□□□ -0.35
CHD2-213ENST00000628118 NUP153P49790 1475 aaKnown RBP12.88□□□□□ -0.35
CHD2-213ENST00000628118 HECW1Q76N89 1606 aa12.87□□□□□ -0.35
CHD2-213ENST00000628118 WDR7Q9Y4E6 1490 aa12.86□□□□□ -0.35
CHD2-213ENST00000628118 DMRT2Q9Y5R5 561 aa12.85□□□□□ -0.35
CHD2-213ENST00000628118 CASKIN1Q8WXD9 1431 aa12.85□□□□□ -0.35
CHD2-213ENST00000628118 GLI2P10070 1586 aa12.85□□□□□ -0.35
CHD2-213ENST00000628118 DIP2BQ9P265 1576 aa12.85□□□□□ -0.35
CHD2-213ENST00000628118 FAM69CQ0P6D2 419 aa12.84□□□□□ -0.35
CHD2-213ENST00000628118 CNKSR2Q8WXI2 1034 aa12.83□□□□□ -0.36
CHD2-213ENST00000628118 FYCO1Q9BQS8 1478 aa12.83□□□□□ -0.36
CHD2-213ENST00000628118 KIF13AQ9H1H9 1805 aa12.83□□□□□ -0.36
CHD2-213ENST00000628118 EPRSP07814 1512 aaKnown RBP12.83□□□□□ -0.36
CHD2-213ENST00000628118 PLEKHD1A6NEE1 506 aa12.82□□□□□ -0.36
CHD2-213ENST00000628118 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.82□□□□□ -0.36
CHD2-213ENST00000628118 HNRNPUL2Q1KMD3 747 aaKnown RBP12.82□□□□□ -0.36
CHD2-213ENST00000628118 NCBP3Q53F19 620 aaKnown RBP12.82□□□□□ -0.36
CHD2-213ENST00000628118 CDK11AQ9UQ88 783 aaPredicted RBP12.82□□□□□ -0.36
CHD2-213ENST00000628118 CCDC18Q5T9S5 1454 aa12.82□□□□□ -0.36
CHD2-213ENST00000628118 KCNA4P22459 653 aa12.8□□□□□ -0.36
CHD2-213ENST00000628118 PCF11O94913 1555 aaKnown RBP12.79□□□□□ -0.36
CHD2-213ENST00000628118 ATP1B4Q9UN42 357 aaPredicted RBP12.79□□□□□ -0.36
CHD2-213ENST00000628118 ARID3CA6NKF2 412 aa12.78□□□□□ -0.36
CHD2-213ENST00000628118 VPS8Q8N3P4 1428 aa12.77□□□□□ -0.37
CHD2-213ENST00000628118 CDK13Q14004 1512 aaKnown RBP12.76□□□□□ -0.37
CHD2-213ENST00000628118 CFAP43Q8NDM7 1665 aa12.75□□□□□ -0.37
CHD2-213ENST00000628118 KCNH8Q96L42 1107 aa12.75□□□□□ -0.37
CHD2-213ENST00000628118 MAP3K4Q9Y6R4 1608 aa12.75□□□□□ -0.37
CHD2-213ENST00000628118 TEX14Q8IWB6 1497 aa12.74□□□□□ -0.37
CHD2-213ENST00000628118 ABCA9Q8IUA7 1624 aa12.73□□□□□ -0.37
CHD2-213ENST00000628118 TROQ12816 1431 aaPredicted RBP12.73□□□□□ -0.37
CHD2-213ENST00000628118 CD109Q6YHK3 1445 aa12.73□□□□□ -0.37
CHD2-213ENST00000628118 MAGI3Q5TCQ9 1506 aa12.72□□□□□ -0.37
CHD2-213ENST00000628118 LRRIQ1Q96JM4 1722 aa12.72□□□□□ -0.37
CHD2-213ENST00000628118 PHLDB1Q86UU1 1377 aa12.7□□□□□ -0.38
CHD2-213ENST00000628118 TSPOAP1O95153 1857 aa12.7□□□□□ -0.38
CHD2-213ENST00000628118 MAP3K1Q13233 1512 aa12.69□□□□□ -0.38
CHD2-213ENST00000628118 KIF14Q15058 1648 aa12.69□□□□□ -0.38
CHD2-213ENST00000628118 PPRC1Q5VV67 1664 aaKnown RBP12.68□□□□□ -0.38
CHD2-213ENST00000628118 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.67□□□□□ -0.38
CHD2-213ENST00000628118 MTUS2Q5JR59 1369 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms