RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 ATAD2BQ9ULI0 1458 aa19.45■□□□□ 0.7
UBE3A-209ENST00000625778 MSH5O43196 834 aa19.45■□□□□ 0.7
UBE3A-209ENST00000625778 CCDC136Q96JN2 1154 aa19.43■□□□□ 0.7
UBE3A-209ENST00000625778 PRXQ9BXM0 1461 aa19.43■□□□□ 0.7
UBE3A-209ENST00000625778 SETD5Q9C0A6 1442 aa19.43■□□□□ 0.7
UBE3A-209ENST00000625778 MAPKBP1O60336 1514 aa19.41■□□□□ 0.7
UBE3A-209ENST00000625778 CDK11AQ9UQ88 783 aaPredicted RBP19.4■□□□□ 0.7
UBE3A-209ENST00000625778 KIF27Q86VH2 1401 aa19.38■□□□□ 0.69
UBE3A-209ENST00000625778 ARHGAP35Q9NRY4 1499 aa19.38■□□□□ 0.69
UBE3A-209ENST00000625778 CNGB1Q14028 1251 aaPredicted RBP19.38■□□□□ 0.69
UBE3A-209ENST00000625778 PHLDB1Q86UU1 1377 aa19.35■□□□□ 0.69
UBE3A-209ENST00000625778 TOP2BQ02880 1626 aa19.35■□□□□ 0.69
UBE3A-209ENST00000625778 CCER2I3L3R5 266 aa19.34■□□□□ 0.69
UBE3A-209ENST00000625778 TONSLQ96HA7 1378 aa19.34■□□□□ 0.69
UBE3A-209ENST00000625778 CUX2O14529 1486 aa19.32■□□□□ 0.68
UBE3A-209ENST00000625778 ERICH3Q5RHP9 1530 aa19.32■□□□□ 0.68
UBE3A-209ENST00000625778 BICRAQ9NZM4 1560 aa19.31■□□□□ 0.68
UBE3A-209ENST00000625778 RTN4Q9NQC3 1192 aaKnown RBP19.28■□□□□ 0.68
UBE3A-209ENST00000625778 FAM9BQ8IZU0 186 aa19.25■□□□□ 0.67
UBE3A-209ENST00000625778 SENP3-EIF4A1A0A087X0R7 540 aa19.25■□□□□ 0.67
UBE3A-209ENST00000625778 PEG3Q9GZU2 1588 aa19.24■□□□□ 0.67
UBE3A-209ENST00000625778 B4GALNT3Q6L9W6 998 aa19.24■□□□□ 0.67
UBE3A-209ENST00000625778 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.23■□□□□ 0.67
UBE3A-209ENST00000625778 NBR1Q14596 966 aa19.22■□□□□ 0.67
UBE3A-209ENST00000625778 CUX1P39880 1505 aa19.22■□□□□ 0.67
UBE3A-209ENST00000625778 SALL2Q9Y467 1007 aaPredicted RBP19.19■□□□□ 0.66
UBE3A-209ENST00000625778 LRRC9Q6ZRR7 1453 aa19.19■□□□□ 0.66
UBE3A-209ENST00000625778 DEKP35659 375 aaKnown RBP19.17■□□□□ 0.66
UBE3A-209ENST00000625778 CCDC184Q52MB2 194 aa19.16■□□□□ 0.66
UBE3A-209ENST00000625778 CARMIL1Q5VZK9 1371 aa19.15■□□□□ 0.66
UBE3A-209ENST00000625778 TIAM1Q13009 1591 aa19.15■□□□□ 0.66
UBE3A-209ENST00000625778 CHIC2Q9UKJ5 165 aa19.15■□□□□ 0.66
UBE3A-209ENST00000625778 IGF1RP08069 1367 aa19.14■□□□□ 0.66
UBE3A-209ENST00000625778 TIMELESSQ9UNS1 1208 aa19.14■□□□□ 0.66
UBE3A-209ENST00000625778 FANCIQ9NVI1 1328 aa19.14■□□□□ 0.65
UBE3A-209ENST00000625778 POLR3GLQ9BT43 218 aa19.13■□□□□ 0.65
UBE3A-209ENST00000625778 BIVM-ERCC5R4GMW8 1640 aa19.13■□□□□ 0.65
UBE3A-209ENST00000625778 FHOD3Q2V2M9 1422 aa19.12■□□□□ 0.65
UBE3A-209ENST00000625778 HSPA5P11021 654 aaKnown RBP19.11■□□□□ 0.65
UBE3A-209ENST00000625778 RRP7BPQ9NSQ0 103 aa19.11■□□□□ 0.65
UBE3A-209ENST00000625778 PPP4R2Q9NY27 417 aa19.1■□□□□ 0.65
UBE3A-209ENST00000625778 MRS2Q9HD23 443 aa19.09■□□□□ 0.65
UBE3A-209ENST00000625778 WASHC2AQ641Q2 1341 aa19.06■□□□□ 0.64
UBE3A-209ENST00000625778 ARID3CA6NKF2 412 aa19.05■□□□□ 0.64
UBE3A-209ENST00000625778 FOXD1Q16676 465 aa19.04■□□□□ 0.64
UBE3A-209ENST00000625778 FHAD1B1AJZ9 1412 aa19.03■□□□□ 0.64
UBE3A-209ENST00000625778 MTUS2Q5JR59 1369 aa19.03■□□□□ 0.64
UBE3A-209ENST00000625778 CCDC18Q5T9S5 1454 aa19.01■□□□□ 0.63
UBE3A-209ENST00000625778 EIF4G2P78344 907 aaKnown RBP eCLIP19■□□□□ 0.63
UBE3A-209ENST00000625778 PAK3O75914 559 aaPredicted RBP18.99■□□□□ 0.63
UBE3A-209ENST00000625778 EIF5BO60841 1220 aaKnown RBP18.99■□□□□ 0.63
UBE3A-209ENST00000625778 PCF11O94913 1555 aaKnown RBP18.97■□□□□ 0.63
UBE3A-209ENST00000625778 NOP58Q9Y2X3 529 aaKnown RBP18.97■□□□□ 0.63
UBE3A-209ENST00000625778 C11orf95C9JLR9 678 aaPredicted RBP18.95■□□□□ 0.62
UBE3A-209ENST00000625778 PTPRKQ15262 1439 aa18.94■□□□□ 0.62
UBE3A-209ENST00000625778 FGD6Q6ZV73 1430 aa18.93■□□□□ 0.62
UBE3A-209ENST00000625778 ZNF326Q5BKZ1 582 aaKnown RBP18.93■□□□□ 0.62
UBE3A-209ENST00000625778 NPM2Q86SE8 214 aaKnown RBP18.92■□□□□ 0.62
UBE3A-209ENST00000625778 PRKRIP1Q9H875 184 aaPredicted RBP18.92■□□□□ 0.62
UBE3A-209ENST00000625778 AQRO60306 1485 aaKnown RBP eCLIP18.92■□□□□ 0.622e-7■■■■□ 21.4
UBE3A-209ENST00000625778 L3MBTL2Q969R5 705 aa18.9■□□□□ 0.62
UBE3A-209ENST00000625778 UACAQ9BZF9 1416 aa18.9■□□□□ 0.62
UBE3A-209ENST00000625778 MAP3K1Q13233 1512 aa18.9■□□□□ 0.62
UBE3A-209ENST00000625778 CFTRP13569 1480 aa18.89■□□□□ 0.62
UBE3A-209ENST00000625778 FGD5Q6ZNL6 1462 aa18.89■□□□□ 0.62
UBE3A-209ENST00000625778 IL27Q8NEV9 243 aa18.89■□□□□ 0.62
UBE3A-209ENST00000625778 RTL5Q5HYW3 569 aaPredicted RBP18.89■□□□□ 0.61
UBE3A-209ENST00000625778 ANP32AP39687 249 aaKnown RBP18.87■□□□□ 0.61
UBE3A-209ENST00000625778 ERICH6BQ5W0A0 696 aa18.84■□□□□ 0.61
UBE3A-209ENST00000625778 NAIPQ13075 1403 aa18.83■□□□□ 0.6
UBE3A-209ENST00000625778 AKNAQ7Z591 1439 aa18.83■□□□□ 0.6
UBE3A-209ENST00000625778 HFM1A2PYH4 1435 aa18.83■□□□□ 0.6
UBE3A-209ENST00000625778 ZBED9Q6R2W3 1325 aa18.82■□□□□ 0.6
UBE3A-209ENST00000625778 NCAPD3P42695 1498 aa18.82■□□□□ 0.6
UBE3A-209ENST00000625778 CNTLNQ9NXG0 1405 aa18.82■□□□□ 0.6
UBE3A-209ENST00000625778 ZBTB47Q9UFB7 747 aaPredicted RBP18.81■□□□□ 0.6
UBE3A-209ENST00000625778 MYT1LQ9UL68 1186 aa18.81■□□□□ 0.6
UBE3A-209ENST00000625778 RAD54L2Q9Y4B4 1467 aa18.81■□□□□ 0.6
UBE3A-209ENST00000625778 FMN1Q68DA7 1419 aa18.81■□□□□ 0.6
UBE3A-209ENST00000625778 MPHOSPH9Q99550 1183 aa18.8■□□□□ 0.6
UBE3A-209ENST00000625778 CASKIN1Q8WXD9 1431 aa18.8■□□□□ 0.6
UBE3A-209ENST00000625778 CCDC7Q96M83 1385 aa18.78■□□□□ 0.6
UBE3A-209ENST00000625778 NBPF8Q3BBV2 869 aa18.78■□□□□ 0.6
UBE3A-209ENST00000625778 FYCO1Q9BQS8 1478 aa18.78■□□□□ 0.6
UBE3A-209ENST00000625778 LAS1LQ9Y4W2 734 aaKnown RBP18.76■□□□□ 0.59
UBE3A-209ENST00000625778 PTPN23Q9H3S7 1636 aa18.76■□□□□ 0.59
UBE3A-209ENST00000625778 CFAP43Q8NDM7 1665 aa18.76■□□□□ 0.59
UBE3A-209ENST00000625778 KIF7Q2M1P5 1343 aa18.75■□□□□ 0.59
UBE3A-209ENST00000625778 CADPSQ9ULU8 1353 aa18.74■□□□□ 0.59
UBE3A-209ENST00000625778 NCOA2Q15596 1464 aa18.74■□□□□ 0.59
UBE3A-209ENST00000625778 IPO9Q96P70 1041 aaKnown RBP18.74■□□□□ 0.59
UBE3A-209ENST00000625778 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.73■□□□□ 0.596e-7■□□□□ 8.4
UBE3A-209ENST00000625778 MYOM3Q5VTT5 1437 aa18.72■□□□□ 0.59
UBE3A-209ENST00000625778 SLC4A1APQ9BWU0 796 aaKnown RBP18.71■□□□□ 0.59
UBE3A-209ENST00000625778 HMGXB3Q12766 1538 aa18.71■□□□□ 0.59
UBE3A-209ENST00000625778 NUDCQ9Y266 331 aa18.7■□□□□ 0.58
UBE3A-209ENST00000625778 TMC1Q8TDI8 760 aa18.69■□□□□ 0.58
UBE3A-209ENST00000625778 KDM5BQ9UGL1 1544 aa18.68■□□□□ 0.58
UBE3A-209ENST00000625778 TDRD9Q8NDG6 1382 aaKnown RBP18.67■□□□□ 0.58
UBE3A-209ENST00000625778 NCOA1Q15788 1441 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms