RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 KIF27Q86VH2 1401 aa33.21■■■□□ 2.91
SMN1-211ENST00000625245 IGF1RP08069 1367 aa33.21■■■□□ 2.91
SMN1-211ENST00000625245 KIF13AQ9H1H9 1805 aa33.16■■■□□ 2.9
SMN1-211ENST00000625245 NPM1P06748 294 aaKnown RBP eCLIP33.15■■■□□ 2.9
SMN1-211ENST00000625245 CUL7Q14999 1698 aa33.13■■■□□ 2.89
SMN1-211ENST00000625245 KIAA0586Q9BVV6 1533 aa33.12■■■□□ 2.89
SMN1-211ENST00000625245 FAM69CQ0P6D2 419 aa33.04■■■□□ 2.88
SMN1-211ENST00000625245 CARMIL1Q5VZK9 1371 aa33.01■■■□□ 2.88
SMN1-211ENST00000625245 ADCY10Q96PN6 1610 aa33.01■■■□□ 2.87
SMN1-211ENST00000625245 ABCC10Q5T3U5 1492 aa32.98■■■□□ 2.87
SMN1-211ENST00000625245 MAPKBP1O60336 1514 aa32.96■■■□□ 2.87
SMN1-211ENST00000625245 TTBK1Q5TCY1 1321 aaPredicted RBP32.96■■■□□ 2.87
SMN1-211ENST00000625245 PTPRGP23470 1445 aa32.89■■■□□ 2.86
SMN1-211ENST00000625245 DIP2BQ9P265 1576 aa32.88■■■□□ 2.85
SMN1-211ENST00000625245 CARMIL2Q6F5E8 1435 aa32.83■■■□□ 2.85
SMN1-211ENST00000625245 TNIKQ9UKE5 1360 aa32.8■■■□□ 2.84
SMN1-211ENST00000625245 TSPOAP1O95153 1857 aa32.79■■■□□ 2.84
SMN1-211ENST00000625245 IQGAP2Q13576 1575 aa32.79■■■□□ 2.84
SMN1-211ENST00000625245 ABCC2Q92887 1545 aa32.68■■■□□ 2.82
SMN1-211ENST00000625245 RAPGEF2Q9Y4G8 1499 aa32.67■■■□□ 2.82
SMN1-211ENST00000625245 KDM6BO15054 1643 aa32.67■■■□□ 2.82
SMN1-211ENST00000625245 DISP1Q96F81 1524 aa32.63■■■□□ 2.81
SMN1-211ENST00000625245 ASXL2Q76L83 1435 aa32.6■■■□□ 2.81
SMN1-211ENST00000625245 UACAQ9BZF9 1416 aa32.6■■■□□ 2.81
SMN1-211ENST00000625245 UHRF1BP1LA0JNW5 1464 aa32.58■■■□□ 2.81
SMN1-211ENST00000625245 PLB1Q6P1J6 1458 aa32.57■■■□□ 2.8
SMN1-211ENST00000625245 UGGT2Q9NYU1 1516 aa32.56■■■□□ 2.8
SMN1-211ENST00000625245 GLI2P10070 1586 aa32.49■■■□□ 2.79
SMN1-211ENST00000625245 KIAA0556O60303 1618 aa32.48■■■□□ 2.79
SMN1-211ENST00000625245 KDM5BQ9UGL1 1544 aa32.45■■■□□ 2.78
SMN1-211ENST00000625245 PPRC1Q5VV67 1664 aaKnown RBP32.43■■■□□ 2.78
SMN1-211ENST00000625245 ZCCHC11Q5TAX3 1644 aaKnown RBP32.42■■■□□ 2.78
SMN1-211ENST00000625245 CTTNBP2Q8WZ74 1663 aa32.42■■■□□ 2.78
SMN1-211ENST00000625245 KDM4FA0A1W2PPD8 638 aa32.41■■■□□ 2.78
SMN1-211ENST00000625245 EPRSP07814 1512 aaKnown RBP32.39■■■□□ 2.78
SMN1-211ENST00000625245 MAP3K4Q9Y6R4 1608 aa32.32■■■□□ 2.76
SMN1-211ENST00000625245 GOLGA3Q08378 1498 aa32.31■■■□□ 2.76
SMN1-211ENST00000625245 PRXQ9BXM0 1461 aa32.27■■■□□ 2.76
SMN1-211ENST00000625245 TEX14Q8IWB6 1497 aa32.26■■■□□ 2.75
SMN1-211ENST00000625245 WDR7Q9Y4E6 1490 aa32.25■■■□□ 2.75
SMN1-211ENST00000625245 COL17A1Q9UMD9 1497 aaPredicted RBP32.24■■■□□ 2.75
SMN1-211ENST00000625245 KCNH8Q96L42 1107 aa32.21■■■□□ 2.75
SMN1-211ENST00000625245 ABCA8O94911 1581 aa32.19■■■□□ 2.74
SMN1-211ENST00000625245 P3H3Q8IVL6 736 aa32.15■■■□□ 2.74
SMN1-211ENST00000625245 FAM9AQ8IZU1 332 aaPredicted RBP32.14■■■□□ 2.74
SMN1-211ENST00000625245 ADGRL1O94910 1474 aa32.11■■■□□ 2.73
SMN1-211ENST00000625245 CD109Q6YHK3 1445 aa32.1■■■□□ 2.73
SMN1-211ENST00000625245 ARID3CA6NKF2 412 aa32.1■■■□□ 2.73
SMN1-211ENST00000625245 CSRNP3Q8WYN3 585 aa32.07■■■□□ 2.72
SMN1-211ENST00000625245 CFAP43Q8NDM7 1665 aa32.07■■■□□ 2.72
SMN1-211ENST00000625245 MAGI3Q5TCQ9 1506 aa32.03■■■□□ 2.72
SMN1-211ENST00000625245 ATP10BO94823 1461 aa31.97■■■□□ 2.71
SMN1-211ENST00000625245 RANGAP1P46060 587 aaPredicted RBP31.93■■■□□ 2.7
SMN1-211ENST00000625245 SAMD9Q5K651 1589 aa31.9■■■□□ 2.7
SMN1-211ENST00000625245 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.88■■■□□ 2.69
SMN1-211ENST00000625245 HNRNPUL2Q1KMD3 747 aaKnown RBP31.88■■■□□ 2.69
SMN1-211ENST00000625245 RAPGEF6Q8TEU7 1601 aa31.86■■■□□ 2.69
SMN1-211ENST00000625245 EEA1Q15075 1411 aa31.83■■■□□ 2.69
SMN1-211ENST00000625245 ARAP3Q8WWN8 1544 aa31.79■■■□□ 2.68
SMN1-211ENST00000625245 ABCA9Q8IUA7 1624 aa31.78■■■□□ 2.68
SMN1-211ENST00000625245 KIF21BO75037 1637 aa31.76■■■□□ 2.67
SMN1-211ENST00000625245 FHOD3Q2V2M9 1422 aa31.75■■■□□ 2.67
SMN1-211ENST00000625245 NUP153P49790 1475 aaKnown RBP31.72■■■□□ 2.67
SMN1-211ENST00000625245 PHLDB1Q86UU1 1377 aa31.71■■■□□ 2.67
SMN1-211ENST00000625245 HECW2Q9P2P5 1572 aa31.71■■■□□ 2.67
SMN1-211ENST00000625245 RAPGEF3O95398 923 aa31.69■■■□□ 2.66
SMN1-211ENST00000625245 PLEKHD1A6NEE1 506 aa31.64■■■□□ 2.66
SMN1-211ENST00000625245 NEO1Q92859 1461 aa31.64■■■□□ 2.66
SMN1-211ENST00000625245 EHMT2Q96KQ7 1210 aa31.6■■■□□ 2.65
SMN1-211ENST00000625245 ILDR1Q86SU0 546 aaPredicted RBP31.59■■■□□ 2.65
SMN1-211ENST00000625245 EFCAB5A4FU69 1503 aa31.57■■■□□ 2.64
SMN1-211ENST00000625245 FRMPD1Q5SYB0 1578 aa31.51■■■□□ 2.64
SMN1-211ENST00000625245 ARID4BQ4LE39 1312 aaPredicted RBP31.51■■■□□ 2.64
SMN1-211ENST00000625245 UBTFP17480 764 aaKnown RBP31.51■■■□□ 2.63
SMN1-211ENST00000625245 ADAMTSL3P82987 1691 aa31.47■■■□□ 2.63
SMN1-211ENST00000625245 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.46■■■□□ 2.63
SMN1-211ENST00000625245 ATP1B4Q9UN42 357 aaPredicted RBP31.46■■■□□ 2.63
SMN1-211ENST00000625245 AKNAQ7Z591 1439 aa31.46■■■□□ 2.63
SMN1-211ENST00000625245 DENND4BO75064 1496 aaPredicted RBP31.46■■■□□ 2.63
SMN1-211ENST00000625245 FANCAO15360 1455 aa31.44■■■□□ 2.62
SMN1-211ENST00000625245 CDK13Q14004 1512 aaKnown RBP31.44■■■□□ 2.62
SMN1-211ENST00000625245 PTPRMP28827 1452 aa31.43■■■□□ 2.62
SMN1-211ENST00000625245 TTC37Q6PGP7 1564 aa31.42■■■□□ 2.62
SMN1-211ENST00000625245 BCORL1Q5H9F3 1711 aa31.41■■■□□ 2.62
SMN1-211ENST00000625245 CFAP74Q9C0B2 1584 aa31.41■■■□□ 2.62
SMN1-211ENST00000625245 RICTORQ6R327 1708 aa31.4■■■□□ 2.62
SMN1-211ENST00000625245 CHIC1Q5VXU3 224 aa31.37■■■□□ 2.61
SMN1-211ENST00000625245 ARHGEF40Q8TER5 1519 aa31.36■■■□□ 2.61
SMN1-211ENST00000625245 MADDQ8WXG6 1647 aa31.35■■■□□ 2.61
SMN1-211ENST00000625245 FMN1Q68DA7 1419 aa31.32■■■□□ 2.61
SMN1-211ENST00000625245 ARHGAP35Q9NRY4 1499 aa31.3■■■□□ 2.6
SMN1-211ENST00000625245 HECW1Q76N89 1606 aa31.29■■■□□ 2.6
SMN1-211ENST00000625245 PLCH2O75038 1416 aa31.27■■■□□ 2.6
SMN1-211ENST00000625245 CDK11AQ9UQ88 783 aaPredicted RBP31.27■■■□□ 2.6
SMN1-211ENST00000625245 RIMS1Q86UR5 1692 aaKnown RBP31.26■■■□□ 2.6
SMN1-211ENST00000625245 ZMYM4Q5VZL5 1548 aa31.25■■■□□ 2.59
SMN1-211ENST00000625245 ZFYVE16Q7Z3T8 1539 aa31.25■■■□□ 2.59
SMN1-211ENST00000625245 SCAPERQ9BY12 1400 aa31.24■■■□□ 2.59
SMN1-211ENST00000625245 PLPPR3Q6T4P5 718 aa31.24■■■□□ 2.59
SMN1-211ENST00000625245 YEATS2Q9ULM3 1422 aa31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms