RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 KIF27Q86VH2 1401 aa33.21■■■□□ 2.91
SMN1-211ENST00000625245 IGF1RP08069 1367 aa33.21■■■□□ 2.91
SMN1-211ENST00000625245 KIF13AQ9H1H9 1805 aa33.16■■■□□ 2.9
SMN1-211ENST00000625245 NPM1P06748 294 aaKnown RBP eCLIP33.15■■■□□ 2.9
SMN1-211ENST00000625245 CUL7Q14999 1698 aa33.13■■■□□ 2.89
SMN1-211ENST00000625245 KIAA0586Q9BVV6 1533 aa33.12■■■□□ 2.89
SMN1-211ENST00000625245 FAM69CQ0P6D2 419 aa33.04■■■□□ 2.88
SMN1-211ENST00000625245 CARMIL1Q5VZK9 1371 aa33.01■■■□□ 2.88
SMN1-211ENST00000625245 ADCY10Q96PN6 1610 aa33.01■■■□□ 2.87
SMN1-211ENST00000625245 ABCC10Q5T3U5 1492 aa32.98■■■□□ 2.87
SMN1-211ENST00000625245 MAPKBP1O60336 1514 aa32.96■■■□□ 2.87
SMN1-211ENST00000625245 TTBK1Q5TCY1 1321 aaPredicted RBP32.96■■■□□ 2.87
SMN1-211ENST00000625245 PTPRGP23470 1445 aa32.89■■■□□ 2.86
SMN1-211ENST00000625245 DIP2BQ9P265 1576 aa32.88■■■□□ 2.85
SMN1-211ENST00000625245 CARMIL2Q6F5E8 1435 aa32.83■■■□□ 2.85
SMN1-211ENST00000625245 TNIKQ9UKE5 1360 aa32.8■■■□□ 2.84
SMN1-211ENST00000625245 TSPOAP1O95153 1857 aa32.79■■■□□ 2.84
SMN1-211ENST00000625245 IQGAP2Q13576 1575 aa32.79■■■□□ 2.84
SMN1-211ENST00000625245 ABCC2Q92887 1545 aa32.68■■■□□ 2.82
SMN1-211ENST00000625245 RAPGEF2Q9Y4G8 1499 aa32.67■■■□□ 2.82
SMN1-211ENST00000625245 KDM6BO15054 1643 aa32.67■■■□□ 2.82
SMN1-211ENST00000625245 DISP1Q96F81 1524 aa32.63■■■□□ 2.81
SMN1-211ENST00000625245 ASXL2Q76L83 1435 aa32.6■■■□□ 2.81
SMN1-211ENST00000625245 UACAQ9BZF9 1416 aa32.6■■■□□ 2.81
SMN1-211ENST00000625245 UHRF1BP1LA0JNW5 1464 aa32.58■■■□□ 2.81
SMN1-211ENST00000625245 PLB1Q6P1J6 1458 aa32.57■■■□□ 2.8
SMN1-211ENST00000625245 UGGT2Q9NYU1 1516 aa32.56■■■□□ 2.8
SMN1-211ENST00000625245 GLI2P10070 1586 aa32.49■■■□□ 2.79
SMN1-211ENST00000625245 KIAA0556O60303 1618 aa32.48■■■□□ 2.79
SMN1-211ENST00000625245 KDM5BQ9UGL1 1544 aa32.45■■■□□ 2.78
SMN1-211ENST00000625245 PPRC1Q5VV67 1664 aaKnown RBP32.43■■■□□ 2.78
SMN1-211ENST00000625245 ZCCHC11Q5TAX3 1644 aaKnown RBP32.42■■■□□ 2.78
SMN1-211ENST00000625245 CTTNBP2Q8WZ74 1663 aa32.42■■■□□ 2.78
SMN1-211ENST00000625245 KDM4FA0A1W2PPD8 638 aa32.41■■■□□ 2.78
SMN1-211ENST00000625245 EPRSP07814 1512 aaKnown RBP32.39■■■□□ 2.78
SMN1-211ENST00000625245 MAP3K4Q9Y6R4 1608 aa32.32■■■□□ 2.76
SMN1-211ENST00000625245 GOLGA3Q08378 1498 aa32.31■■■□□ 2.76
SMN1-211ENST00000625245 PRXQ9BXM0 1461 aa32.27■■■□□ 2.76
SMN1-211ENST00000625245 TEX14Q8IWB6 1497 aa32.26■■■□□ 2.75
SMN1-211ENST00000625245 WDR7Q9Y4E6 1490 aa32.25■■■□□ 2.75
SMN1-211ENST00000625245 COL17A1Q9UMD9 1497 aaPredicted RBP32.24■■■□□ 2.75
SMN1-211ENST00000625245 KCNH8Q96L42 1107 aa32.21■■■□□ 2.75
SMN1-211ENST00000625245 ABCA8O94911 1581 aa32.19■■■□□ 2.74
SMN1-211ENST00000625245 P3H3Q8IVL6 736 aa32.15■■■□□ 2.74
SMN1-211ENST00000625245 FAM9AQ8IZU1 332 aaPredicted RBP32.14■■■□□ 2.74
SMN1-211ENST00000625245 ADGRL1O94910 1474 aa32.11■■■□□ 2.73
SMN1-211ENST00000625245 CD109Q6YHK3 1445 aa32.1■■■□□ 2.73
SMN1-211ENST00000625245 ARID3CA6NKF2 412 aa32.1■■■□□ 2.73
SMN1-211ENST00000625245 CSRNP3Q8WYN3 585 aa32.07■■■□□ 2.72
SMN1-211ENST00000625245 CFAP43Q8NDM7 1665 aa32.07■■■□□ 2.72
SMN1-211ENST00000625245 MAGI3Q5TCQ9 1506 aa32.03■■■□□ 2.72
SMN1-211ENST00000625245 ATP10BO94823 1461 aa31.97■■■□□ 2.71
SMN1-211ENST00000625245 RANGAP1P46060 587 aaPredicted RBP31.93■■■□□ 2.7
SMN1-211ENST00000625245 SAMD9Q5K651 1589 aa31.9■■■□□ 2.7
SMN1-211ENST00000625245 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.88■■■□□ 2.69
SMN1-211ENST00000625245 HNRNPUL2Q1KMD3 747 aaKnown RBP31.88■■■□□ 2.69
SMN1-211ENST00000625245 RAPGEF6Q8TEU7 1601 aa31.86■■■□□ 2.69
SMN1-211ENST00000625245 EEA1Q15075 1411 aa31.83■■■□□ 2.69
SMN1-211ENST00000625245 ARAP3Q8WWN8 1544 aa31.79■■■□□ 2.68
SMN1-211ENST00000625245 ABCA9Q8IUA7 1624 aa31.78■■■□□ 2.68
SMN1-211ENST00000625245 KIF21BO75037 1637 aa31.76■■■□□ 2.67
SMN1-211ENST00000625245 FHOD3Q2V2M9 1422 aa31.75■■■□□ 2.67
SMN1-211ENST00000625245 NUP153P49790 1475 aaKnown RBP31.72■■■□□ 2.67
SMN1-211ENST00000625245 PHLDB1Q86UU1 1377 aa31.71■■■□□ 2.67
SMN1-211ENST00000625245 HECW2Q9P2P5 1572 aa31.71■■■□□ 2.67
SMN1-211ENST00000625245 RAPGEF3O95398 923 aa31.69■■■□□ 2.66
SMN1-211ENST00000625245 PLEKHD1A6NEE1 506 aa31.64■■■□□ 2.66
SMN1-211ENST00000625245 NEO1Q92859 1461 aa31.64■■■□□ 2.66
SMN1-211ENST00000625245 EHMT2Q96KQ7 1210 aa31.6■■■□□ 2.65
SMN1-211ENST00000625245 ILDR1Q86SU0 546 aaPredicted RBP31.59■■■□□ 2.65
SMN1-211ENST00000625245 EFCAB5A4FU69 1503 aa31.57■■■□□ 2.64
SMN1-211ENST00000625245 FRMPD1Q5SYB0 1578 aa31.51■■■□□ 2.64
SMN1-211ENST00000625245 ARID4BQ4LE39 1312 aaPredicted RBP31.51■■■□□ 2.64
SMN1-211ENST00000625245 UBTFP17480 764 aaKnown RBP31.51■■■□□ 2.63
SMN1-211ENST00000625245 ADAMTSL3P82987 1691 aa31.47■■■□□ 2.63
SMN1-211ENST00000625245 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.46■■■□□ 2.63
SMN1-211ENST00000625245 ATP1B4Q9UN42 357 aaPredicted RBP31.46■■■□□ 2.63
SMN1-211ENST00000625245 AKNAQ7Z591 1439 aa31.46■■■□□ 2.63
SMN1-211ENST00000625245 DENND4BO75064 1496 aaPredicted RBP31.46■■■□□ 2.63
SMN1-211ENST00000625245 FANCAO15360 1455 aa31.44■■■□□ 2.62
SMN1-211ENST00000625245 CDK13Q14004 1512 aaKnown RBP31.44■■■□□ 2.62
SMN1-211ENST00000625245 PTPRMP28827 1452 aa31.43■■■□□ 2.62
SMN1-211ENST00000625245 TTC37Q6PGP7 1564 aa31.42■■■□□ 2.62
SMN1-211ENST00000625245 BCORL1Q5H9F3 1711 aa31.41■■■□□ 2.62
SMN1-211ENST00000625245 CFAP74Q9C0B2 1584 aa31.41■■■□□ 2.62
SMN1-211ENST00000625245 RICTORQ6R327 1708 aa31.4■■■□□ 2.62
SMN1-211ENST00000625245 CHIC1Q5VXU3 224 aa31.37■■■□□ 2.61
SMN1-211ENST00000625245 ARHGEF40Q8TER5 1519 aa31.36■■■□□ 2.61
SMN1-211ENST00000625245 MADDQ8WXG6 1647 aa31.35■■■□□ 2.61
SMN1-211ENST00000625245 FMN1Q68DA7 1419 aa31.32■■■□□ 2.61
SMN1-211ENST00000625245 ARHGAP35Q9NRY4 1499 aa31.3■■■□□ 2.6
SMN1-211ENST00000625245 HECW1Q76N89 1606 aa31.29■■■□□ 2.6
SMN1-211ENST00000625245 PLCH2O75038 1416 aa31.27■■■□□ 2.6
SMN1-211ENST00000625245 CDK11AQ9UQ88 783 aaPredicted RBP31.27■■■□□ 2.6
SMN1-211ENST00000625245 RIMS1Q86UR5 1692 aaKnown RBP31.26■■■□□ 2.6
SMN1-211ENST00000625245 ZMYM4Q5VZL5 1548 aa31.25■■■□□ 2.59
SMN1-211ENST00000625245 ZFYVE16Q7Z3T8 1539 aa31.25■■■□□ 2.59
SMN1-211ENST00000625245 SCAPERQ9BY12 1400 aa31.24■■■□□ 2.59
SMN1-211ENST00000625245 PLPPR3Q6T4P5 718 aa31.24■■■□□ 2.59
SMN1-211ENST00000625245 YEATS2Q9ULM3 1422 aa31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms