RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 RUSC2Q8N2Y8 1516 aa41.5■■■■■ 4.23
ATXN3-253ENST00000621269 CUL7Q14999 1698 aa41.5■■■■■ 4.23
ATXN3-253ENST00000621269 KIAA0586Q9BVV6 1533 aa41.38■■■■■ 4.21
ATXN3-253ENST00000621269 CARMIL1Q5VZK9 1371 aa41.37■■■■■ 4.21
ATXN3-253ENST00000621269 NPM1P06748 294 aaKnown RBP eCLIP41.13■■■■■ 4.17
ATXN3-253ENST00000621269 RAPGEF2Q9Y4G8 1499 aa41.02■■■■■ 4.16
ATXN3-253ENST00000621269 CARMIL2Q6F5E8 1435 aa41.01■■■■■ 4.16
ATXN3-253ENST00000621269 IQGAP2Q13576 1575 aa41■■■■■ 4.15
ATXN3-253ENST00000621269 ADCY10Q96PN6 1610 aa40.99■■■■■ 4.15
ATXN3-253ENST00000621269 PTPRGP23470 1445 aa40.98■■■■■ 4.15
ATXN3-253ENST00000621269 TTBK1Q5TCY1 1321 aaPredicted RBP40.94■■■■■ 4.15
ATXN3-253ENST00000621269 TNIKQ9UKE5 1360 aa40.92■■■■■ 4.14
ATXN3-253ENST00000621269 MAPKBP1O60336 1514 aa40.91■■■■■ 4.14
ATXN3-253ENST00000621269 KIF13AQ9H1H9 1805 aa40.9■■■■■ 4.14
ATXN3-253ENST00000621269 FAM69CQ0P6D2 419 aa40.87■■■■■ 4.13
ATXN3-253ENST00000621269 ABCC10Q5T3U5 1492 aa40.85■■■■■ 4.13
ATXN3-253ENST00000621269 DISP1Q96F81 1524 aa40.77■■■■■ 4.12
ATXN3-253ENST00000621269 UGGT2Q9NYU1 1516 aa40.75■■■■■ 4.11
ATXN3-253ENST00000621269 DIP2BQ9P265 1576 aa40.72■■■■■ 4.11
ATXN3-253ENST00000621269 ABCC2Q92887 1545 aa40.68■■■■■ 4.1
ATXN3-253ENST00000621269 UACAQ9BZF9 1416 aa40.66■■■■■ 4.1
ATXN3-253ENST00000621269 UHRF1BP1LA0JNW5 1464 aa40.64■■■■■ 4.1
ATXN3-253ENST00000621269 PRXQ9BXM0 1461 aa40.63■■■■■ 4.09
ATXN3-253ENST00000621269 KIAA0556O60303 1618 aa40.61■■■■■ 4.09
ATXN3-253ENST00000621269 CTTNBP2Q8WZ74 1663 aa40.6■■■■■ 4.09
ATXN3-253ENST00000621269 ASXL2Q76L83 1435 aa40.52■■■■■ 4.08
ATXN3-253ENST00000621269 PLB1Q6P1J6 1458 aa40.51■■■■■ 4.08
ATXN3-253ENST00000621269 GOLGA3Q08378 1498 aa40.51■■■■■ 4.07
ATXN3-253ENST00000621269 AEBP2Q6ZN18 517 aaPredicted RBP40.5■■■■■ 4.07
ATXN3-253ENST00000621269 CSRNP3Q8WYN3 585 aa40.46■■■■■ 4.07
ATXN3-253ENST00000621269 KDM5BQ9UGL1 1544 aa40.44■■■■■ 4.06
ATXN3-253ENST00000621269 TSPOAP1O95153 1857 aa40.41■■■■■ 4.06
ATXN3-253ENST00000621269 GLI2P10070 1586 aa40.35■■■■■ 4.05
ATXN3-253ENST00000621269 ZCCHC11Q5TAX3 1644 aaKnown RBP40.34■■■■■ 4.05
ATXN3-253ENST00000621269 KDM6BO15054 1643 aa40.33■■■■■ 4.05
ATXN3-253ENST00000621269 EEA1Q15075 1411 aa40.32■■■■■ 4.04
ATXN3-253ENST00000621269 FAM9AQ8IZU1 332 aaPredicted RBP40.28■■■■■ 4.04
ATXN3-253ENST00000621269 EPRSP07814 1512 aaKnown RBP40.26■■■■■ 4.04
ATXN3-253ENST00000621269 ABCA8O94911 1581 aa40.22■■■■■ 4.03
ATXN3-253ENST00000621269 P3H3Q8IVL6 736 aa40.2■■■■■ 4.03
ATXN3-253ENST00000621269 WDR7Q9Y4E6 1490 aa40.17■■■■■ 4.02
ATXN3-253ENST00000621269 PPRC1Q5VV67 1664 aaKnown RBP40.15■■■■■ 4.02
ATXN3-253ENST00000621269 MAP3K4Q9Y6R4 1608 aa40.12■■■■■ 4.01
ATXN3-253ENST00000621269 TEX14Q8IWB6 1497 aa40.07■■■■■ 4
ATXN3-253ENST00000621269 SAMD9Q5K651 1589 aa40.05■■■■■ 4
ATXN3-253ENST00000621269 KCNH8Q96L42 1107 aa40.04■■■■■ 4
ATXN3-253ENST00000621269 RANGAP1P46060 587 aaPredicted RBP40.01■■■■■ 4
ATXN3-253ENST00000621269 ARID3CA6NKF2 412 aa39.98■■■■□ 3.99
ATXN3-253ENST00000621269 CHIC1Q5VXU3 224 aa39.93■■■■□ 3.98
ATXN3-253ENST00000621269 KIF21BO75037 1637 aa39.93■■■■□ 3.98
ATXN3-253ENST00000621269 CD109Q6YHK3 1445 aa39.92■■■■□ 3.98
ATXN3-253ENST00000621269 ATP10BO94823 1461 aa39.92■■■■□ 3.98
ATXN3-253ENST00000621269 COL17A1Q9UMD9 1497 aaPredicted RBP39.89■■■■□ 3.98
ATXN3-253ENST00000621269 CFAP43Q8NDM7 1665 aa39.88■■■■□ 3.97
ATXN3-253ENST00000621269 RAPGEF6Q8TEU7 1601 aa39.87■■■■□ 3.97
ATXN3-253ENST00000621269 MAGI3Q5TCQ9 1506 aa39.85■■■■□ 3.97
ATXN3-253ENST00000621269 FHOD3Q2V2M9 1422 aa39.82■■■■□ 3.97
ATXN3-253ENST00000621269 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.82■■■■□ 3.97
ATXN3-253ENST00000621269 HNRNPUL2Q1KMD3 747 aaKnown RBP39.82■■■■□ 3.97
ATXN3-253ENST00000621269 KDM4FA0A1W2PPD8 638 aa39.81■■■■□ 3.96
ATXN3-253ENST00000621269 EHMT2Q96KQ7 1210 aa39.75■■■■□ 3.95
ATXN3-253ENST00000621269 EFCAB5A4FU69 1503 aa39.75■■■■□ 3.95
ATXN3-253ENST00000621269 UBTFP17480 764 aaKnown RBP39.74■■■■□ 3.95
ATXN3-253ENST00000621269 NUP153P49790 1475 aaKnown RBP39.72■■■■□ 3.95
ATXN3-253ENST00000621269 ABCA9Q8IUA7 1624 aa39.63■■■■□ 3.93
ATXN3-253ENST00000621269 PLEKHD1A6NEE1 506 aa39.58■■■■□ 3.93
ATXN3-253ENST00000621269 ADGRL1O94910 1474 aa39.56■■■■□ 3.92
ATXN3-253ENST00000621269 PHLDB1Q86UU1 1377 aa39.53■■■■□ 3.92
ATXN3-253ENST00000621269 ARAP3Q8WWN8 1544 aa39.53■■■■□ 3.92
ATXN3-253ENST00000621269 NEO1Q92859 1461 aa39.43■■■■□ 3.9
ATXN3-253ENST00000621269 FMN1Q68DA7 1419 aa39.43■■■■□ 3.9
ATXN3-253ENST00000621269 ARHGAP35Q9NRY4 1499 aa39.42■■■■□ 3.9
ATXN3-253ENST00000621269 ATP1B4Q9UN42 357 aaPredicted RBP39.41■■■■□ 3.9
ATXN3-253ENST00000621269 CDK13Q14004 1512 aaKnown RBP39.35■■■■□ 3.89
ATXN3-253ENST00000621269 RAPGEF3O95398 923 aa39.34■■■■□ 3.89
ATXN3-253ENST00000621269 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.3■■■■□ 3.88
ATXN3-253ENST00000621269 HECW1Q76N89 1606 aa39.3■■■■□ 3.88
ATXN3-253ENST00000621269 CDK11AQ9UQ88 783 aaPredicted RBP39.24■■■■□ 3.87
ATXN3-253ENST00000621269 FANCAO15360 1455 aa39.23■■■■□ 3.87
ATXN3-253ENST00000621269 TTC37Q6PGP7 1564 aa39.22■■■■□ 3.87
ATXN3-253ENST00000621269 AKNAQ7Z591 1439 aa39.22■■■■□ 3.87
ATXN3-253ENST00000621269 CFAP74Q9C0B2 1584 aa39.2■■■■□ 3.87
ATXN3-253ENST00000621269 DENND4BO75064 1496 aaPredicted RBP39.17■■■■□ 3.86
ATXN3-253ENST00000621269 FRMPD1Q5SYB0 1578 aa39.16■■■■□ 3.86
ATXN3-253ENST00000621269 PLCH2O75038 1416 aa39.1■■■■□ 3.85
ATXN3-253ENST00000621269 RICTORQ6R327 1708 aa39.04■■■■□ 3.84
ATXN3-253ENST00000621269 ARID4BQ4LE39 1312 aaPredicted RBP39.04■■■■□ 3.84
ATXN3-253ENST00000621269 TROQ12816 1431 aaPredicted RBP39.04■■■■□ 3.84
ATXN3-253ENST00000621269 CLIP1P30622 1438 aa39.03■■■■□ 3.84
ATXN3-253ENST00000621269 KIF14Q15058 1648 aa39.01■■■■□ 3.84
ATXN3-253ENST00000621269 CASKIN1Q8WXD9 1431 aa39.01■■■■□ 3.84
ATXN3-253ENST00000621269 EFCAB2Q5VUJ9 269 aa39■■■■□ 3.83
ATXN3-253ENST00000621269 ARHGEF40Q8TER5 1519 aa38.97■■■■□ 3.83
ATXN3-253ENST00000621269 LRRIQ1Q96JM4 1722 aa38.97■■■■□ 3.83
ATXN3-253ENST00000621269 SCAPERQ9BY12 1400 aa38.97■■■■□ 3.83
ATXN3-253ENST00000621269 MYO5CQ9NQX4 1742 aa38.96■■■■□ 3.83
ATXN3-253ENST00000621269 CCDC18Q5T9S5 1454 aa38.96■■■■□ 3.83
ATXN3-253ENST00000621269 PCF11O94913 1555 aaKnown RBP38.95■■■■□ 3.83
ATXN3-253ENST00000621269 ZMYM4Q5VZL5 1548 aa38.94■■■■□ 3.82
ATXN3-253ENST00000621269 ADAMTSL3P82987 1691 aa38.92■■■■□ 3.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms