RNA–Protein interactions for RNA: ENST00000619559.4

LCK-214, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCK, Length 2,099 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-214ENST00000619559 CCNB3Q8WWL7 1395 aa31.66■■■□□ 2.66
LCK-214ENST00000619559 PCF11O94913 1555 aaKnown RBP31.65■■■□□ 2.66
LCK-214ENST00000619559 DIEXFQ68CQ4 756 aaKnown RBP31.64■■■□□ 2.66
LCK-214ENST00000619559 CLSPNQ9HAW4 1339 aa31.62■■■□□ 2.65
LCK-214ENST00000619559 LRRC9Q6ZRR7 1453 aa31.61■■■□□ 2.65
LCK-214ENST00000619559 ZNF316A6NFI3 1004 aaPredicted RBP31.61■■■□□ 2.65
LCK-214ENST00000619559 DHX57Q6P158 1386 aaKnown RBP31.57■■■□□ 2.64
LCK-214ENST00000619559 GAPVD1Q14C86 1478 aa31.56■■■□□ 2.64
LCK-214ENST00000619559 AQRO60306 1485 aaKnown RBP eCLIP31.55■■■□□ 2.64
LCK-214ENST00000619559 FYCO1Q9BQS8 1478 aa31.55■■■□□ 2.64
LCK-214ENST00000619559 DNAJC5BQ9UF47 199 aa31.55■■■□□ 2.64
LCK-214ENST00000619559 FHOD3Q2V2M9 1422 aa31.53■■■□□ 2.64
LCK-214ENST00000619559 TARBP1Q13395 1621 aaKnown RBP31.51■■■□□ 2.63
LCK-214ENST00000619559 TDRD9Q8NDG6 1382 aaKnown RBP31.5■■■□□ 2.63
LCK-214ENST00000619559 CASKIN1Q8WXD9 1431 aa31.49■■■□□ 2.63
LCK-214ENST00000619559 P3H3Q8IVL6 736 aa31.47■■■□□ 2.63
LCK-214ENST00000619559 SAMD9Q5K651 1589 aa31.45■■■□□ 2.62
LCK-214ENST00000619559 FMN1Q68DA7 1419 aa31.41■■■□□ 2.62
LCK-214ENST00000619559 PHLDB1Q86UU1 1377 aa31.39■■■□□ 2.62
LCK-214ENST00000619559 PBRM1Q86U86 1689 aa31.39■■■□□ 2.62
LCK-214ENST00000619559 SNAPC4Q5SXM2 1469 aa31.34■■■□□ 2.61
LCK-214ENST00000619559 MRC2Q9UBG0 1479 aa31.33■■■□□ 2.61
LCK-214ENST00000619559 ITGAEP38570 1179 aa31.29■■■□□ 2.6
LCK-214ENST00000619559 ATP1B4Q9UN42 357 aaPredicted RBP31.29■■■□□ 2.6
LCK-214ENST00000619559 THOC2Q8NI27 1593 aaKnown RBP31.26■■■□□ 2.59
LCK-214ENST00000619559 RAB3GAP2Q9H2M9 1393 aa31.26■■■□□ 2.59
LCK-214ENST00000619559 LRRIQ1Q96JM4 1722 aa31.25■■■□□ 2.59
LCK-214ENST00000619559 SETD5Q9C0A6 1442 aa31.24■■■□□ 2.59
LCK-214ENST00000619559 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.22■■■□□ 2.59
LCK-214ENST00000619559 ADAMTS12P58397 1594 aa31.22■■■□□ 2.59
LCK-214ENST00000619559 GRIN2BQ13224 1484 aa31.2■■■□□ 2.59
LCK-214ENST00000619559 FAM50AQ14320 339 aaKnown RBP31.17■■■□□ 2.58
LCK-214ENST00000619559 SCAF1Q9H7N4 1312 aaKnown RBP31.14■■■□□ 2.58
LCK-214ENST00000619559 MAPKBP1O60336 1514 aa31.13■■■□□ 2.57
LCK-214ENST00000619559 ACIN1Q9UKV3 1341 aaKnown RBP31.12■■■□□ 2.57
LCK-214ENST00000619559 WDR62O43379 1518 aa31.12■■■□□ 2.57
LCK-214ENST00000619559 IQGAP2Q13576 1575 aa31.11■■■□□ 2.57
LCK-214ENST00000619559 IFT140Q96RY7 1462 aa31.1■■■□□ 2.57
LCK-214ENST00000619559 FGD6Q6ZV73 1430 aa31.1■■■□□ 2.57
LCK-214ENST00000619559 MTUS2Q5JR59 1369 aa31.09■■■□□ 2.57
LCK-214ENST00000619559 CENPBP07199 599 aaPredicted RBP31.09■■■□□ 2.57
LCK-214ENST00000619559 EHBP1L1Q8N3D4 1523 aa31.07■■■□□ 2.56
LCK-214ENST00000619559 SUPT6HQ7KZ85 1726 aaKnown RBP31.07■■■□□ 2.56
LCK-214ENST00000619559 CCDC18Q5T9S5 1454 aa31.03■■■□□ 2.56
LCK-214ENST00000619559 HECW1Q76N89 1606 aa31.02■■■□□ 2.56
LCK-214ENST00000619559 NEUROD1Q13562 356 aa31.02■■■□□ 2.56
LCK-214ENST00000619559 NCOA2Q15596 1464 aa31■■■□□ 2.55
LCK-214ENST00000619559 MIER1Q8N108 512 aa30.97■■■□□ 2.55
LCK-214ENST00000619559 UGGT2Q9NYU1 1516 aa30.96■■■□□ 2.55
LCK-214ENST00000619559 ZNF608Q9ULD9 1512 aaPredicted RBP30.96■■■□□ 2.55
LCK-214ENST00000619559 MYOM3Q5VTT5 1437 aa30.95■■■□□ 2.55
LCK-214ENST00000619559 ARHGEF11O15085 1522 aa30.94■■■□□ 2.54
LCK-214ENST00000619559 MAGI3Q5TCQ9 1506 aa30.9■■■□□ 2.54
LCK-214ENST00000619559 EIF4G3O43432 1585 aaKnown RBP30.88■■■□□ 2.53
LCK-214ENST00000619559 PTPN23Q9H3S7 1636 aa30.87■■■□□ 2.53
LCK-214ENST00000619559 EPRSP07814 1512 aaKnown RBP30.85■■■□□ 2.53
LCK-214ENST00000619559 KIAA0586Q9BVV6 1533 aa30.83■■■□□ 2.53
LCK-214ENST00000619559 HFM1A2PYH4 1435 aa30.83■■■□□ 2.53
LCK-214ENST00000619559 PTPRKQ15262 1439 aa30.81■■■□□ 2.52
LCK-214ENST00000619559 KIAA0556O60303 1618 aa30.8■■■□□ 2.52
LCK-214ENST00000619559 ERCC6Q03468 1493 aa30.79■■■□□ 2.52
LCK-214ENST00000619559 TCOF1Q13428 1488 aaKnown RBP30.79■■■□□ 2.52
LCK-214ENST00000619559 GRIN2AQ12879 1464 aa30.78■■■□□ 2.52
LCK-214ENST00000619559 TIMELESSQ9UNS1 1208 aa30.78■■■□□ 2.52
LCK-214ENST00000619559 CDK13Q14004 1512 aaKnown RBP30.74■■■□□ 2.51
LCK-214ENST00000619559 DISP1Q96F81 1524 aa30.73■■■□□ 2.51
LCK-214ENST00000619559 MAGI1Q96QZ7 1491 aaPredicted RBP30.72■■■□□ 2.51
LCK-214ENST00000619559 NAIPQ13075 1403 aa30.71■■■□□ 2.51
LCK-214ENST00000619559 SIN3AQ96ST3 1273 aa30.71■■■□□ 2.51
LCK-214ENST00000619559 UACAQ9BZF9 1416 aa30.71■■■□□ 2.51
LCK-214ENST00000619559 GCC2Q8IWJ2 1684 aa30.68■■■□□ 2.5
LCK-214ENST00000619559 YTHDC1Q96MU7 727 aaKnown RBP30.67■■■□□ 2.5
LCK-214ENST00000619559 MIA2Q96PC5 1412 aa30.67■■■□□ 2.5
LCK-214ENST00000619559 RAPGEF6Q8TEU7 1601 aa30.66■■■□□ 2.5
LCK-214ENST00000619559 GTF3C3Q9Y5Q9 886 aa30.64■■■□□ 2.5
LCK-214ENST00000619559 SYNJ2O15056 1496 aa30.62■■■□□ 2.49
LCK-214ENST00000619559 AKNAQ7Z591 1439 aa30.61■■■□□ 2.49
LCK-214ENST00000619559 CEP170Q5SW79 1584 aa30.6■■■□□ 2.49
LCK-214ENST00000619559 NUP153P49790 1475 aaKnown RBP30.57■■■□□ 2.48
LCK-214ENST00000619559 PPP1R15AO75807 674 aaPredicted RBP30.53■■■□□ 2.48
LCK-214ENST00000619559 CHMP7Q8WUX9 453 aaPredicted RBP30.49■■■□□ 2.47
LCK-214ENST00000619559 TONSLQ96HA7 1378 aa30.47■■■□□ 2.47
LCK-214ENST00000619559 NUP160Q12769 1436 aa30.47■■■□□ 2.47
LCK-214ENST00000619559 ARID3CA6NKF2 412 aa30.46■■■□□ 2.47
LCK-214ENST00000619559 DNMT1P26358 1616 aaKnown RBP30.44■■■□□ 2.46
LCK-214ENST00000619559 RRP7BPQ9NSQ0 103 aa30.43■■■□□ 2.46
LCK-214ENST00000619559 CDK11AQ9UQ88 783 aaPredicted RBP30.43■■■□□ 2.46
LCK-214ENST00000619559 KDM6BO15054 1643 aa30.42■■■□□ 2.46
LCK-214ENST00000619559 CHIC2Q9UKJ5 165 aa30.41■■■□□ 2.46
LCK-214ENST00000619559 CARMIL2Q6F5E8 1435 aa30.4■■■□□ 2.46
LCK-214ENST00000619559 ADCY10Q96PN6 1610 aa30.39■■■□□ 2.46
LCK-214ENST00000619559 DAPK1P53355 1430 aa30.38■■■□□ 2.45
LCK-214ENST00000619559 ITSN2Q9NZM3 1697 aa30.38■■■□□ 2.45
LCK-214ENST00000619559 TROQ12816 1431 aaPredicted RBP30.38■■■□□ 2.45
LCK-214ENST00000619559 ROCK1Q13464 1354 aa30.37■■■□□ 2.45
LCK-214ENST00000619559 DENND4BO75064 1496 aaPredicted RBP30.33■■■□□ 2.45
LCK-214ENST00000619559 PLB1Q6P1J6 1458 aa30.33■■■□□ 2.45
LCK-214ENST00000619559 KDM5BQ9UGL1 1544 aa30.33■■■□□ 2.45
LCK-214ENST00000619559 FBLN2P98095 1184 aa30.32■■■□□ 2.44
LCK-214ENST00000619559 ABCC5O15440 1437 aa30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms