RNA–Protein interactions for RNA: ENST00000619541.4

SYNRG-225, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-225ENST00000619541 ERICH3Q5RHP9 1530 aa20.72■□□□□ 0.91
SYNRG-225ENST00000619541 RAD54L2Q9Y4B4 1467 aa20.71■□□□□ 0.91
SYNRG-225ENST00000619541 VPS8Q8N3P4 1428 aa20.69■□□□□ 0.9
SYNRG-225ENST00000619541 DDX10Q13206 875 aaKnown RBP20.69■□□□□ 0.9
SYNRG-225ENST00000619541 TOPBP1Q92547 1522 aa20.68■□□□□ 0.9
SYNRG-225ENST00000619541 DNMBPQ6XZF7 1577 aa20.65■□□□□ 0.9
SYNRG-225ENST00000619541 LAMC3Q9Y6N6 1575 aa20.65■□□□□ 0.9
SYNRG-225ENST00000619541 POLA1P09884 1462 aaPredicted RBP20.64■□□□□ 0.9
SYNRG-225ENST00000619541 CARMIL1Q5VZK9 1371 aa20.64■□□□□ 0.89
SYNRG-225ENST00000619541 MSH5O43196 834 aa20.62■□□□□ 0.89
SYNRG-225ENST00000619541 PRKCSHP14314 528 aaPredicted RBP20.62■□□□□ 0.89
SYNRG-225ENST00000619541 URB2Q14146 1524 aaKnown RBP20.62■□□□□ 0.89
SYNRG-225ENST00000619541 IRX6P78412 446 aaPredicted RBP20.6■□□□□ 0.89
SYNRG-225ENST00000619541 ARAP1Q96P48 1450 aa20.59■□□□□ 0.89
SYNRG-225ENST00000619541 PDS5BQ9NTI5 1447 aa20.58■□□□□ 0.88
SYNRG-225ENST00000619541 HIRIP3Q9BW71 556 aaPredicted RBP20.58■□□□□ 0.88
SYNRG-225ENST00000619541 DHX57Q6P158 1386 aaKnown RBP20.57■□□□□ 0.88
SYNRG-225ENST00000619541 ABCA10Q8WWZ4 1543 aa20.54■□□□□ 0.88
SYNRG-225ENST00000619541 TDRD9Q8NDG6 1382 aaKnown RBP20.52■□□□□ 0.88
SYNRG-225ENST00000619541 CDK11AQ9UQ88 783 aaPredicted RBP20.52■□□□□ 0.88
SYNRG-225ENST00000619541 ARHGAP35Q9NRY4 1499 aa20.51■□□□□ 0.87
SYNRG-225ENST00000619541 KANK4Q5T7N3 995 aaPredicted RBP20.48■□□□□ 0.87
SYNRG-225ENST00000619541 KIF21AQ7Z4S6 1674 aa20.48■□□□□ 0.87
SYNRG-225ENST00000619541 P3H3Q8IVL6 736 aa20.46■□□□□ 0.87
SYNRG-225ENST00000619541 DEKP35659 375 aaKnown RBP20.44■□□□□ 0.86
SYNRG-225ENST00000619541 NBR1Q14596 966 aa20.43■□□□□ 0.86
SYNRG-225ENST00000619541 ANP32CO43423 234 aa20.42■□□□□ 0.86
SYNRG-225ENST00000619541 GAPVD1Q14C86 1478 aa20.35■□□□□ 0.85
SYNRG-225ENST00000619541 SIN3AQ96ST3 1273 aa20.34■□□□□ 0.85
SYNRG-225ENST00000619541 WDR97A6NE52 1622 aa20.33■□□□□ 0.85
SYNRG-225ENST00000619541 HNRNPUQ00839 825 aaKnown RBP eCLIP20.33■□□□□ 0.84
SYNRG-225ENST00000619541 ANO8Q9HCE9 1232 aaPredicted RBP20.31■□□□□ 0.84
SYNRG-225ENST00000619541 ATP1B4Q9UN42 357 aaPredicted RBP20.3■□□□□ 0.84
SYNRG-225ENST00000619541 FANCIQ9NVI1 1328 aa20.3■□□□□ 0.84
SYNRG-225ENST00000619541 ABCA5Q8WWZ7 1642 aa20.29■□□□□ 0.84
SYNRG-225ENST00000619541 AQRO60306 1485 aaKnown RBP eCLIP20.28■□□□□ 0.843e-7■■■■■ 29
SYNRG-225ENST00000619541 MRC2Q9UBG0 1479 aa20.28■□□□□ 0.84
SYNRG-225ENST00000619541 FHOD3Q2V2M9 1422 aa20.27■□□□□ 0.84
SYNRG-225ENST00000619541 CUL7Q14999 1698 aa20.27■□□□□ 0.84
SYNRG-225ENST00000619541 TARBP1Q13395 1621 aaKnown RBP20.27■□□□□ 0.84
SYNRG-225ENST00000619541 MYT1LQ9UL68 1186 aa20.2■□□□□ 0.82
SYNRG-225ENST00000619541 RTN4Q9NQC3 1192 aaKnown RBP20.19■□□□□ 0.82
SYNRG-225ENST00000619541 B4GALNT3Q6L9W6 998 aa20.18■□□□□ 0.82
SYNRG-225ENST00000619541 ZNF608Q9ULD9 1512 aaPredicted RBP20.18■□□□□ 0.82
SYNRG-225ENST00000619541 FAM50AQ14320 339 aaKnown RBP20.17■□□□□ 0.82
SYNRG-225ENST00000619541 PPP1R15AO75807 674 aaPredicted RBP20.17■□□□□ 0.82
SYNRG-225ENST00000619541 CCER2I3L3R5 266 aa20.16■□□□□ 0.82
SYNRG-225ENST00000619541 FHAD1B1AJZ9 1412 aa20.16■□□□□ 0.82
SYNRG-225ENST00000619541 CCDC136Q96JN2 1154 aa20.16■□□□□ 0.82
SYNRG-225ENST00000619541 ERCC6Q03468 1493 aa20.16■□□□□ 0.82
SYNRG-225ENST00000619541 RTL5Q5HYW3 569 aaPredicted RBP20.15■□□□□ 0.82
SYNRG-225ENST00000619541 CTTNBP2Q8WZ74 1663 aa20.14■□□□□ 0.81
SYNRG-225ENST00000619541 TIAM1Q13009 1591 aa20.14■□□□□ 0.81
SYNRG-225ENST00000619541 PCF11O94913 1555 aaKnown RBP20.14■□□□□ 0.81
SYNRG-225ENST00000619541 RAB3GAP2Q9H2M9 1393 aa20.13■□□□□ 0.81
SYNRG-225ENST00000619541 NOP58Q9Y2X3 529 aaKnown RBP20.12■□□□□ 0.81
SYNRG-225ENST00000619541 RRBP1Q9P2E9 1410 aaKnown RBP20.11■□□□□ 0.81
SYNRG-225ENST00000619541 CCNB3Q8WWL7 1395 aa20.11■□□□□ 0.81
SYNRG-225ENST00000619541 SALL2Q9Y467 1007 aaPredicted RBP20.11■□□□□ 0.81
SYNRG-225ENST00000619541 LRRC9Q6ZRR7 1453 aa20.1■□□□□ 0.81
SYNRG-225ENST00000619541 EFCAB5A4FU69 1503 aa20.1■□□□□ 0.81
SYNRG-225ENST00000619541 WDR62O43379 1518 aa20.1■□□□□ 0.81
SYNRG-225ENST00000619541 PAK3O75914 559 aaPredicted RBP20.08■□□□□ 0.81
SYNRG-225ENST00000619541 IFT140Q96RY7 1462 aa20.08■□□□□ 0.81
SYNRG-225ENST00000619541 PPP4R2Q9NY27 417 aa20.07■□□□□ 0.8
SYNRG-225ENST00000619541 GRIN2BQ13224 1484 aa20.07■□□□□ 0.8
SYNRG-225ENST00000619541 PBRM1Q86U86 1689 aa20.07■□□□□ 0.8
SYNRG-225ENST00000619541 PHLDB1Q86UU1 1377 aa20.07■□□□□ 0.8
SYNRG-225ENST00000619541 MAP3K1Q13233 1512 aa20.06■□□□□ 0.8
SYNRG-225ENST00000619541 CNGB1Q14028 1251 aaPredicted RBP20.06■□□□□ 0.8
SYNRG-225ENST00000619541 CASKIN1Q8WXD9 1431 aa20.05■□□□□ 0.8
SYNRG-225ENST00000619541 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.04■□□□□ 0.8
SYNRG-225ENST00000619541 FMN1Q68DA7 1419 aa20.03■□□□□ 0.8
SYNRG-225ENST00000619541 FYCO1Q9BQS8 1478 aa20.03■□□□□ 0.8
SYNRG-225ENST00000619541 FAM9BQ8IZU0 186 aa20.02■□□□□ 0.8
SYNRG-225ENST00000619541 ADAMTS12P58397 1594 aa20.02■□□□□ 0.79
SYNRG-225ENST00000619541 SAMD9Q5K651 1589 aa20■□□□□ 0.79
SYNRG-225ENST00000619541 SNAPC4Q5SXM2 1469 aa20■□□□□ 0.79
SYNRG-225ENST00000619541 IL27Q8NEV9 243 aa19.98■□□□□ 0.79
SYNRG-225ENST00000619541 ANP32AP39687 249 aaKnown RBP19.97■□□□□ 0.79
SYNRG-225ENST00000619541 CFAP43Q8NDM7 1665 aa19.97■□□□□ 0.79
SYNRG-225ENST00000619541 THOC2Q8NI27 1593 aaKnown RBP19.96■□□□□ 0.79
SYNRG-225ENST00000619541 ARID3CA6NKF2 412 aa19.95■□□□□ 0.78
SYNRG-225ENST00000619541 ZBTB47Q9UFB7 747 aaPredicted RBP19.95■□□□□ 0.78
SYNRG-225ENST00000619541 SENP3-EIF4A1A0A087X0R7 540 aa19.94■□□□□ 0.78
SYNRG-225ENST00000619541 FBLN2P98095 1184 aa19.94■□□□□ 0.78
SYNRG-225ENST00000619541 NPM2Q86SE8 214 aaKnown RBP19.94■□□□□ 0.78
SYNRG-225ENST00000619541 EIF4G3O43432 1585 aaKnown RBP19.93■□□□□ 0.78
SYNRG-225ENST00000619541 IQGAP2Q13576 1575 aa19.93■□□□□ 0.78
SYNRG-225ENST00000619541 TONSLQ96HA7 1378 aa19.92■□□□□ 0.78
SYNRG-225ENST00000619541 MTUS2Q5JR59 1369 aa19.92■□□□□ 0.78
SYNRG-225ENST00000619541 SETD5Q9C0A6 1442 aa19.91■□□□□ 0.78
SYNRG-225ENST00000619541 CHMP7Q8WUX9 453 aaPredicted RBP19.9■□□□□ 0.78
SYNRG-225ENST00000619541 MAPKBP1O60336 1514 aa19.89■□□□□ 0.77
SYNRG-225ENST00000619541 LRRIQ1Q96JM4 1722 aa19.86■□□□□ 0.77
SYNRG-225ENST00000619541 GRIN2AQ12879 1464 aa19.86■□□□□ 0.77
SYNRG-225ENST00000619541 EIF5BO60841 1220 aaKnown RBP19.86■□□□□ 0.77
SYNRG-225ENST00000619541 LAS1LQ9Y4W2 734 aaKnown RBP19.85■□□□□ 0.77
SYNRG-225ENST00000619541 CCDC184Q52MB2 194 aa19.84■□□□□ 0.77
SYNRG-225ENST00000619541 MRS2Q9HD23 443 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms