RNA–Protein interactions for RNA: ENST00000619541.4

SYNRG-225, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-225ENST00000619541 NISCHQ9Y2I1 1504 aa29.13■■■□□ 2.25
SYNRG-225ENST00000619541 CCDC180Q9P1Z9 1646 aa24.93■■□□□ 1.58
SYNRG-225ENST00000619541 SHROOM4Q9ULL8 1493 aa24.54■■□□□ 1.52
SYNRG-225ENST00000619541 ZCCHC6Q5VYS8 1495 aaKnown RBP24.52■■□□□ 1.52
SYNRG-225ENST00000619541 HRCP23327 699 aa24.48■■□□□ 1.51
SYNRG-225ENST00000619541 DCAF8L2P0C7V8 631 aa24.43■■□□□ 1.5
SYNRG-225ENST00000619541 SUPT5HO00267 1087 aaKnown RBP24.35■■□□□ 1.49
SYNRG-225ENST00000619541 PPARGC1BQ86YN6 1023 aaKnown RBP24.27■■□□□ 1.48
SYNRG-225ENST00000619541 PCGF6Q9BYE7 350 aa24.26■■□□□ 1.47
SYNRG-225ENST00000619541 DCAF1Q9Y4B6 1507 aa23.86■■□□□ 1.41
SYNRG-225ENST00000619541 PELP1Q8IZL8 1130 aaKnown RBP23.73■■□□□ 1.39
SYNRG-225ENST00000619541 ABCC9O60706 1549 aa23.67■■□□□ 1.38
SYNRG-225ENST00000619541 CHIC1Q5VXU3 224 aa23.59■■□□□ 1.37
SYNRG-225ENST00000619541 MYO15BQ96JP2 1530 aa23.58■■□□□ 1.37
SYNRG-225ENST00000619541 SCRIBQ14160 1630 aa23.36■■□□□ 1.33
SYNRG-225ENST00000619541 LOC105371045A0A1W2PR82 267 aa23.33■■□□□ 1.33
SYNRG-225ENST00000619541 SCAF1Q9H7N4 1312 aaKnown RBP23.3■■□□□ 1.32
SYNRG-225ENST00000619541 NACADO15069 1562 aa23.22■■□□□ 1.31
SYNRG-225ENST00000619541 TRIM26Q12899 539 aaPredicted RBP23.17■■□□□ 1.3
SYNRG-225ENST00000619541 ZEB1P37275 1124 aaPredicted RBP22.97■■□□□ 1.27
SYNRG-225ENST00000619541 RB1CC1Q8TDY2 1594 aa22.95■■□□□ 1.26
SYNRG-225ENST00000619541 RSF1Q96T23 1441 aaPredicted RBP22.89■■□□□ 1.25
SYNRG-225ENST00000619541 EHMT2Q96KQ7 1210 aa22.83■■□□□ 1.24
SYNRG-225ENST00000619541 CECR2Q9BXF3 1484 aa22.81■■□□□ 1.24
SYNRG-225ENST00000619541 MYT1Q01538 1121 aa22.79■■□□□ 1.24
SYNRG-225ENST00000619541 NEUROD1Q13562 356 aa22.7■■□□□ 1.22
SYNRG-225ENST00000619541 ACIN1Q9UKV3 1341 aaKnown RBP22.69■■□□□ 1.22
SYNRG-225ENST00000619541 GTF3C3Q9Y5Q9 886 aa22.68■■□□□ 1.22
SYNRG-225ENST00000619541 FAM9AQ8IZU1 332 aaPredicted RBP22.65■■□□□ 1.22
SYNRG-225ENST00000619541 MROH2BQ7Z745 1585 aa22.65■■□□□ 1.22
SYNRG-225ENST00000619541 PABPN1Q86U42 306 aaKnown RBP eCLIP22.59■■□□□ 1.21
SYNRG-225ENST00000619541 UNC13AQ9UPW8 1703 aa22.56■■□□□ 1.2
SYNRG-225ENST00000619541 CENPBP07199 599 aaPredicted RBP22.53■■□□□ 1.2
SYNRG-225ENST00000619541 WIZO95785 1651 aa22.47■■□□□ 1.19
SYNRG-225ENST00000619541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.44■■□□□ 1.18
SYNRG-225ENST00000619541 CCER1Q8TC90 406 aaPredicted RBP22.43■■□□□ 1.18
SYNRG-225ENST00000619541 BAZ1AQ9NRL2 1556 aaPredicted RBP22.39■■□□□ 1.18
SYNRG-225ENST00000619541 BICRAQ9NZM4 1560 aa22.38■■□□□ 1.17
SYNRG-225ENST00000619541 DIEXFQ68CQ4 756 aaKnown RBP22.37■■□□□ 1.17
SYNRG-225ENST00000619541 YTHDC1Q96MU7 727 aaKnown RBP22.36■■□□□ 1.17
SYNRG-225ENST00000619541 TRIM41Q8WV44 630 aa22.33■■□□□ 1.17
SYNRG-225ENST00000619541 SMARCA4P51532 1647 aa22.27■■□□□ 1.16
SYNRG-225ENST00000619541 TTBK1Q5TCY1 1321 aaPredicted RBP22.25■■□□□ 1.15
SYNRG-225ENST00000619541 TOP2AP11388 1531 aaKnown RBP22.09■■□□□ 1.13
SYNRG-225ENST00000619541 CCDC88BA6NC98 1476 aa22.04■■□□□ 1.12
SYNRG-225ENST00000619541 SMARCA2P51531 1590 aa21.97■■□□□ 1.11
SYNRG-225ENST00000619541 EIF4G1Q04637 1599 aaKnown RBP21.9■■□□□ 1.1
SYNRG-225ENST00000619541 ATAD2BQ9ULI0 1458 aa21.87■■□□□ 1.09
SYNRG-225ENST00000619541 PEG3Q9GZU2 1588 aa21.85■■□□□ 1.09
SYNRG-225ENST00000619541 ABCC8Q09428 1581 aa21.8■■□□□ 1.08
SYNRG-225ENST00000619541 ZNF316A6NFI3 1004 aaPredicted RBP21.8■■□□□ 1.08
SYNRG-225ENST00000619541 BAZ1BQ9UIG0 1483 aaKnown RBP21.77■■□□□ 1.08
SYNRG-225ENST00000619541 MIER1Q8N108 512 aa21.76■■□□□ 1.07
SYNRG-225ENST00000619541 BCL11AQ9H165 835 aa21.55■■□□□ 1.04
SYNRG-225ENST00000619541 SOGA1O94964 1423 aa21.53■■□□□ 1.04
SYNRG-225ENST00000619541 NCAPD3P42695 1498 aa21.53■■□□□ 1.04
SYNRG-225ENST00000619541 WRNQ14191 1432 aaPredicted RBP eCLIP21.5■■□□□ 1.03
SYNRG-225ENST00000619541 HNRNPUL2Q1KMD3 747 aaKnown RBP21.5■■□□□ 1.03
SYNRG-225ENST00000619541 RUSC2Q8N2Y8 1516 aa21.46■■□□□ 1.03
SYNRG-225ENST00000619541 ANP32EQ9BTT0 268 aa21.44■■□□□ 1.02
SYNRG-225ENST00000619541 HMGXB3Q12766 1538 aa21.43■■□□□ 1.02
SYNRG-225ENST00000619541 SUPT16HQ9Y5B9 1047 aaKnown RBP21.41■■□□□ 1.02
SYNRG-225ENST00000619541 SYNJ1O43426 1573 aa21.4■■□□□ 1.02
SYNRG-225ENST00000619541 CSRNP3Q8WYN3 585 aa21.36■■□□□ 1.01
SYNRG-225ENST00000619541 BCANQ96GW7 911 aa21.35■■□□□ 1.01
SYNRG-225ENST00000619541 TSHZ2Q9NRE2 1034 aa21.33■■□□□ 1
SYNRG-225ENST00000619541 UBTFP17480 764 aaKnown RBP21.32■■□□□ 1
SYNRG-225ENST00000619541 CC2D2AQ9P2K1 1620 aa21.26■□□□□ 0.99
SYNRG-225ENST00000619541 EEA1Q15075 1411 aa21.24■□□□□ 0.99
SYNRG-225ENST00000619541 CFTRP13569 1480 aa21.21■□□□□ 0.99
SYNRG-225ENST00000619541 TOP2BQ02880 1626 aa21.15■□□□□ 0.98
SYNRG-225ENST00000619541 RANGAP1P46060 587 aaPredicted RBP21.14■□□□□ 0.98
SYNRG-225ENST00000619541 CEP162Q5TB80 1403 aa21.14■□□□□ 0.97
SYNRG-225ENST00000619541 TNIKQ9UKE5 1360 aa21.14■□□□□ 0.97
SYNRG-225ENST00000619541 CUX1P39880 1505 aa21.11■□□□□ 0.97
SYNRG-225ENST00000619541 CADPSQ9ULU8 1353 aa21.1■□□□□ 0.97
SYNRG-225ENST00000619541 GOLGA3Q08378 1498 aa21.09■□□□□ 0.97
SYNRG-225ENST00000619541 CLSPNQ9HAW4 1339 aa21.07■□□□□ 0.96
SYNRG-225ENST00000619541 BIVM-ERCC5R4GMW8 1640 aa21.05■□□□□ 0.96
SYNRG-225ENST00000619541 APLP2Q06481 763 aa21.05■□□□□ 0.96
SYNRG-225ENST00000619541 DNAJC5BQ9UF47 199 aa21.04■□□□□ 0.96
SYNRG-225ENST00000619541 CEP164Q9UPV0 1460 aa21.03■□□□□ 0.96
SYNRG-225ENST00000619541 FKBP8Q14318 412 aa21.03■□□□□ 0.96
SYNRG-225ENST00000619541 RAPGEF2Q9Y4G8 1499 aa21.01■□□□□ 0.95
SYNRG-225ENST00000619541 KIF21BO75037 1637 aa20.96■□□□□ 0.95
SYNRG-225ENST00000619541 KCNH8Q96L42 1107 aa20.94■□□□□ 0.94
SYNRG-225ENST00000619541 ITGAEP38570 1179 aa20.94■□□□□ 0.94
SYNRG-225ENST00000619541 NESP48681 1621 aa20.94■□□□□ 0.94
SYNRG-225ENST00000619541 NEFLP07196 543 aa20.91■□□□□ 0.94
SYNRG-225ENST00000619541 ERICH6Q7L0X2 663 aa20.89■□□□□ 0.93
SYNRG-225ENST00000619541 RBM19Q9Y4C8 960 aaKnown RBP20.89■□□□□ 0.93
SYNRG-225ENST00000619541 FANCD2Q9BXW9 1451 aa20.88■□□□□ 0.93
SYNRG-225ENST00000619541 KIF27Q86VH2 1401 aa20.88■□□□□ 0.93
SYNRG-225ENST00000619541 PRDM2Q13029 1718 aa20.87■□□□□ 0.93
SYNRG-225ENST00000619541 CLIP1P30622 1438 aa20.87■□□□□ 0.93
SYNRG-225ENST00000619541 PRXQ9BXM0 1461 aa20.84■□□□□ 0.93
SYNRG-225ENST00000619541 FGD5Q6ZNL6 1462 aa20.82■□□□□ 0.92
SYNRG-225ENST00000619541 CUX2O14529 1486 aa20.81■□□□□ 0.92
SYNRG-225ENST00000619541 IGF1RP08069 1367 aa20.75■□□□□ 0.91
SYNRG-225ENST00000619541 TRIM52Q96A61 297 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms