RNA–Protein interactions for RNA: ENST00000619160.4

PCSK6-218, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,093 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-218ENST00000619160 TRIM52Q96A61 297 aa32.83■■■□□ 2.85
PCSK6-218ENST00000619160 P3H3Q8IVL6 736 aa32.81■■■□□ 2.84
PCSK6-218ENST00000619160 SETD5Q9C0A6 1442 aa32.8■■■□□ 2.84
PCSK6-218ENST00000619160 MAPKBP1O60336 1514 aa32.8■■■□□ 2.84
PCSK6-218ENST00000619160 WDR97A6NE52 1622 aa32.71■■■□□ 2.83
PCSK6-218ENST00000619160 ANP32CO43423 234 aa32.69■■■□□ 2.82
PCSK6-218ENST00000619160 PHLDB1Q86UU1 1377 aa32.69■■■□□ 2.82
PCSK6-218ENST00000619160 RBM19Q9Y4C8 960 aaKnown RBP32.66■■■□□ 2.82
PCSK6-218ENST00000619160 PPP1R15AO75807 674 aaPredicted RBP32.65■■■□□ 2.82
PCSK6-218ENST00000619160 IGF1RP08069 1367 aa32.61■■■□□ 2.81
PCSK6-218ENST00000619160 TIAM1Q13009 1591 aa32.59■■■□□ 2.81
PCSK6-218ENST00000619160 LRRC9Q6ZRR7 1453 aa32.57■■■□□ 2.8
PCSK6-218ENST00000619160 CARMIL1Q5VZK9 1371 aa32.57■■■□□ 2.8
PCSK6-218ENST00000619160 NCAPD3P42695 1498 aa32.5■■■□□ 2.79
PCSK6-218ENST00000619160 CFTRP13569 1480 aa32.49■■■□□ 2.79
PCSK6-218ENST00000619160 CCER2I3L3R5 266 aa32.49■■■□□ 2.79
PCSK6-218ENST00000619160 TIMELESSQ9UNS1 1208 aa32.46■■■□□ 2.79
PCSK6-218ENST00000619160 TONSLQ96HA7 1378 aa32.45■■■□□ 2.78
PCSK6-218ENST00000619160 MSH5O43196 834 aa32.42■■■□□ 2.78
PCSK6-218ENST00000619160 FHAD1B1AJZ9 1412 aa32.41■■■□□ 2.78
PCSK6-218ENST00000619160 HMGXB3Q12766 1538 aa32.39■■■□□ 2.78
PCSK6-218ENST00000619160 MAP3K1Q13233 1512 aa32.39■■■□□ 2.77
PCSK6-218ENST00000619160 IRX6P78412 446 aaPredicted RBP32.38■■■□□ 2.77
PCSK6-218ENST00000619160 HNRNPUQ00839 825 aaKnown RBP eCLIP32.35■■■□□ 2.77
PCSK6-218ENST00000619160 FHOD3Q2V2M9 1422 aa32.34■■■□□ 2.77
PCSK6-218ENST00000619160 FGD5Q6ZNL6 1462 aa32.27■■■□□ 2.76
PCSK6-218ENST00000619160 PCF11O94913 1555 aaKnown RBP32.26■■■□□ 2.75
PCSK6-218ENST00000619160 ERICH6Q7L0X2 663 aa32.24■■■□□ 2.75
PCSK6-218ENST00000619160 PRKCSHP14314 528 aaPredicted RBP32.23■■■□□ 2.75
PCSK6-218ENST00000619160 CDK11AQ9UQ88 783 aaPredicted RBP32.15■■■□□ 2.74
PCSK6-218ENST00000619160 MTUS2Q5JR59 1369 aa32.14■■■□□ 2.74
PCSK6-218ENST00000619160 CADPSQ9ULU8 1353 aa32.14■■■□□ 2.74
PCSK6-218ENST00000619160 CCDC18Q5T9S5 1454 aa32.13■■■□□ 2.73
PCSK6-218ENST00000619160 FGD6Q6ZV73 1430 aa32.1■■■□□ 2.73
PCSK6-218ENST00000619160 CFAP43Q8NDM7 1665 aa32.08■■■□□ 2.73
PCSK6-218ENST00000619160 FYCO1Q9BQS8 1478 aa32.05■■■□□ 2.72
PCSK6-218ENST00000619160 CASKIN1Q8WXD9 1431 aa32.04■■■□□ 2.72
PCSK6-218ENST00000619160 CHIC2Q9UKJ5 165 aa32.04■■■□□ 2.72
PCSK6-218ENST00000619160 RRP7BPQ9NSQ0 103 aa32.03■■■□□ 2.72
PCSK6-218ENST00000619160 UACAQ9BZF9 1416 aa32.02■■■□□ 2.72
PCSK6-218ENST00000619160 PTPRKQ15262 1439 aa32.02■■■□□ 2.72
PCSK6-218ENST00000619160 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.02■■■□□ 2.72
PCSK6-218ENST00000619160 HSPA5P11021 654 aaKnown RBP32.01■■■□□ 2.72
PCSK6-218ENST00000619160 RAD54L2Q9Y4B4 1467 aa32■■■□□ 2.71
PCSK6-218ENST00000619160 WASHC2AQ641Q2 1341 aa31.96■■■□□ 2.71
PCSK6-218ENST00000619160 HFM1A2PYH4 1435 aa31.96■■■□□ 2.71
PCSK6-218ENST00000619160 FAM9BQ8IZU0 186 aa31.96■■■□□ 2.71
PCSK6-218ENST00000619160 FMN1Q68DA7 1419 aa31.92■■■□□ 2.7
PCSK6-218ENST00000619160 CCDC184Q52MB2 194 aa31.92■■■□□ 2.7
PCSK6-218ENST00000619160 EIF4G2P78344 907 aaKnown RBP eCLIP31.9■■■□□ 2.7
PCSK6-218ENST00000619160 AQRO60306 1485 aaKnown RBP eCLIP31.9■■■□□ 2.76e-7■■□□□ 11.9
PCSK6-218ENST00000619160 NAIPQ13075 1403 aa31.89■■■□□ 2.7
PCSK6-218ENST00000619160 DEKP35659 375 aaKnown RBP31.89■■■□□ 2.69
PCSK6-218ENST00000619160 FANCIQ9NVI1 1328 aa31.87■■■□□ 2.69
PCSK6-218ENST00000619160 CNGB1Q14028 1251 aaPredicted RBP31.86■■■□□ 2.69
PCSK6-218ENST00000619160 FANCD2Q9BXW9 1451 aa31.85■■■□□ 2.69
PCSK6-218ENST00000619160 EFCAB5A4FU69 1503 aa31.85■■■□□ 2.69
PCSK6-218ENST00000619160 PTPN23Q9H3S7 1636 aa31.84■■■□□ 2.69
PCSK6-218ENST00000619160 B4GALNT3Q6L9W6 998 aa31.84■■■□□ 2.69
PCSK6-218ENST00000619160 PPP4R2Q9NY27 417 aa31.84■■■□□ 2.69
PCSK6-218ENST00000619160 MRS2Q9HD23 443 aa31.83■■■□□ 2.69
PCSK6-218ENST00000619160 FOXD1Q16676 465 aa31.81■■■□□ 2.68
PCSK6-218ENST00000619160 NCOA2Q15596 1464 aa31.81■■■□□ 2.68
PCSK6-218ENST00000619160 MYOM3Q5VTT5 1437 aa31.79■■■□□ 2.68
PCSK6-218ENST00000619160 PRDM2Q13029 1718 aa31.78■■■□□ 2.68
PCSK6-218ENST00000619160 ARID3CA6NKF2 412 aa31.78■■■□□ 2.68
PCSK6-218ENST00000619160 NBR1Q14596 966 aa31.76■■■□□ 2.67
PCSK6-218ENST00000619160 L3MBTL2Q969R5 705 aa31.74■■■□□ 2.67
PCSK6-218ENST00000619160 POLA1P09884 1462 aaPredicted RBP31.74■■■□□ 2.67
PCSK6-218ENST00000619160 SNAPC4Q5SXM2 1469 aa31.73■■■□□ 2.67
PCSK6-218ENST00000619160 C11orf95C9JLR9 678 aaPredicted RBP31.73■■■□□ 2.67
PCSK6-218ENST00000619160 PRKRIP1Q9H875 184 aaPredicted RBP31.72■■■□□ 2.67
PCSK6-218ENST00000619160 ANO8Q9HCE9 1232 aaPredicted RBP31.71■■■□□ 2.67
PCSK6-218ENST00000619160 ABCA10Q8WWZ4 1543 aa31.71■■■□□ 2.67
PCSK6-218ENST00000619160 TDRD9Q8NDG6 1382 aaKnown RBP31.68■■■□□ 2.66
PCSK6-218ENST00000619160 KDM5BQ9UGL1 1544 aa31.68■■■□□ 2.66
PCSK6-218ENST00000619160 ERICH6BQ5W0A0 696 aa31.67■■■□□ 2.66
PCSK6-218ENST00000619160 MPHOSPH9Q99550 1183 aa31.67■■■□□ 2.66
PCSK6-218ENST00000619160 CNTLNQ9NXG0 1405 aa31.67■■■□□ 2.66
PCSK6-218ENST00000619160 POLR3GLQ9BT43 218 aa31.66■■■□□ 2.66
PCSK6-218ENST00000619160 TOPBP1Q92547 1522 aa31.64■■■□□ 2.66
PCSK6-218ENST00000619160 SENP3-EIF4A1A0A087X0R7 540 aa31.62■■■□□ 2.65
PCSK6-218ENST00000619160 CCDC7Q96M83 1385 aa31.6■■■□□ 2.65
PCSK6-218ENST00000619160 DNMBPQ6XZF7 1577 aa31.6■■■□□ 2.65
PCSK6-218ENST00000619160 ZBED9Q6R2W3 1325 aa31.57■■■□□ 2.64
PCSK6-218ENST00000619160 CTTNBP2Q8WZ74 1663 aa31.56■■■□□ 2.64
PCSK6-218ENST00000619160 NESP48681 1621 aa31.55■■■□□ 2.64
PCSK6-218ENST00000619160 CUL7Q14999 1698 aa31.54■■■□□ 2.64
PCSK6-218ENST00000619160 CC2D2AQ9P2K1 1620 aa31.53■■■□□ 2.64
PCSK6-218ENST00000619160 NBPF8Q3BBV2 869 aa31.53■■■□□ 2.64
PCSK6-218ENST00000619160 GRIN2BQ13224 1484 aa31.52■■■□□ 2.64
PCSK6-218ENST00000619160 SUPT6HQ7KZ85 1726 aaKnown RBP31.52■■■□□ 2.64
PCSK6-218ENST00000619160 EHBP1L1Q8N3D4 1523 aa31.5■■■□□ 2.63
PCSK6-218ENST00000619160 DENND4BO75064 1496 aaPredicted RBP31.5■■■□□ 2.63
PCSK6-218ENST00000619160 KIF7Q2M1P5 1343 aa31.48■■■□□ 2.63
PCSK6-218ENST00000619160 ZNF326Q5BKZ1 582 aaKnown RBP31.48■■■□□ 2.63
PCSK6-218ENST00000619160 NCOA1Q15788 1441 aa31.47■■■□□ 2.63
PCSK6-218ENST00000619160 PAK3O75914 559 aaPredicted RBP31.47■■■□□ 2.63
PCSK6-218ENST00000619160 SLC4A1APQ9BWU0 796 aaKnown RBP31.45■■■□□ 2.63
PCSK6-218ENST00000619160 UGGT2Q9NYU1 1516 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms