RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 LRRC9Q6ZRR7 1453 aa22.22■■□□□ 1.15
GPN1-212ENST00000616939 CCER2I3L3R5 266 aa22.17■■□□□ 1.14
GPN1-212ENST00000616939 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.14■■□□□ 1.14
GPN1-212ENST00000616939 FHAD1B1AJZ9 1412 aa22.14■■□□□ 1.13
GPN1-212ENST00000616939 PPP1R15AO75807 674 aaPredicted RBP22.13■■□□□ 1.13
GPN1-212ENST00000616939 KCNH8Q96L42 1107 aa22.11■■□□□ 1.13
GPN1-212ENST00000616939 PCF11O94913 1555 aaKnown RBP22.09■■□□□ 1.13
GPN1-212ENST00000616939 PHLDB1Q86UU1 1377 aa22.09■■□□□ 1.13
GPN1-212ENST00000616939 IGF1RP08069 1367 aa22.08■■□□□ 1.13
GPN1-212ENST00000616939 FKBP8Q14318 412 aa22.06■■□□□ 1.12
GPN1-212ENST00000616939 NEFLP07196 543 aa22.04■■□□□ 1.12
GPN1-212ENST00000616939 AQRO60306 1485 aaKnown RBP eCLIP22.03■■□□□ 1.12
GPN1-212ENST00000616939 EFCAB5A4FU69 1503 aa22.03■■□□□ 1.12
GPN1-212ENST00000616939 FYCO1Q9BQS8 1478 aa22.02■■□□□ 1.12
GPN1-212ENST00000616939 ITGAEP38570 1179 aa22.02■■□□□ 1.12
GPN1-212ENST00000616939 DDX10Q13206 875 aaKnown RBP22.01■■□□□ 1.11
GPN1-212ENST00000616939 CARMIL1Q5VZK9 1371 aa22.01■■□□□ 1.11
GPN1-212ENST00000616939 FGD5Q6ZNL6 1462 aa21.96■■□□□ 1.11
GPN1-212ENST00000616939 ANP32CO43423 234 aa21.95■■□□□ 1.1
GPN1-212ENST00000616939 BCANQ96GW7 911 aa21.94■■□□□ 1.1
GPN1-212ENST00000616939 SIN3AQ96ST3 1273 aa21.94■■□□□ 1.1
GPN1-212ENST00000616939 RBM19Q9Y4C8 960 aaKnown RBP21.94■■□□□ 1.1
GPN1-212ENST00000616939 CASKIN1Q8WXD9 1431 aa21.93■■□□□ 1.1
GPN1-212ENST00000616939 CTTNBP2Q8WZ74 1663 aa21.92■■□□□ 1.1
GPN1-212ENST00000616939 CC2D2AQ9P2K1 1620 aa21.9■■□□□ 1.1
GPN1-212ENST00000616939 CUL7Q14999 1698 aa21.88■■□□□ 1.09
GPN1-212ENST00000616939 BCL11AQ9H165 835 aa21.87■■□□□ 1.09
GPN1-212ENST00000616939 FAM50AQ14320 339 aaKnown RBP21.87■■□□□ 1.09
GPN1-212ENST00000616939 PTPN23Q9H3S7 1636 aa21.87■■□□□ 1.09
GPN1-212ENST00000616939 UACAQ9BZF9 1416 aa21.86■■□□□ 1.09
GPN1-212ENST00000616939 CCDC18Q5T9S5 1454 aa21.86■■□□□ 1.09
GPN1-212ENST00000616939 HFM1A2PYH4 1435 aa21.85■■□□□ 1.09
GPN1-212ENST00000616939 FGD6Q6ZV73 1430 aa21.85■■□□□ 1.09
GPN1-212ENST00000616939 TONSLQ96HA7 1378 aa21.83■■□□□ 1.08
GPN1-212ENST00000616939 KDM5BQ9UGL1 1544 aa21.82■■□□□ 1.08
GPN1-212ENST00000616939 CADPSQ9ULU8 1353 aa21.81■■□□□ 1.08
GPN1-212ENST00000616939 FANCIQ9NVI1 1328 aa21.8■■□□□ 1.08
GPN1-212ENST00000616939 ERICH6BQ5W0A0 696 aa21.8■■□□□ 1.08
GPN1-212ENST00000616939 THOC2Q8NI27 1593 aaKnown RBP21.8■■□□□ 1.08
GPN1-212ENST00000616939 ABCA10Q8WWZ4 1543 aa21.78■■□□□ 1.08
GPN1-212ENST00000616939 FHOD3Q2V2M9 1422 aa21.77■■□□□ 1.08
GPN1-212ENST00000616939 FMN1Q68DA7 1419 aa21.77■■□□□ 1.08
GPN1-212ENST00000616939 SNAPC4Q5SXM2 1469 aa21.77■■□□□ 1.08
GPN1-212ENST00000616939 TRIM52Q96A61 297 aa21.76■■□□□ 1.07
GPN1-212ENST00000616939 DNMBPQ6XZF7 1577 aa21.76■■□□□ 1.07
GPN1-212ENST00000616939 KIF21AQ7Z4S6 1674 aa21.74■■□□□ 1.07
GPN1-212ENST00000616939 GCC2Q8IWJ2 1684 aa21.74■■□□□ 1.07
GPN1-212ENST00000616939 HECW1Q76N89 1606 aa21.73■■□□□ 1.07
GPN1-212ENST00000616939 SAMD9Q5K651 1589 aa21.73■■□□□ 1.07
GPN1-212ENST00000616939 NCOA2Q15596 1464 aa21.72■■□□□ 1.07
GPN1-212ENST00000616939 SUPT6HQ7KZ85 1726 aaKnown RBP21.71■■□□□ 1.07
GPN1-212ENST00000616939 LRRIQ1Q96JM4 1722 aa21.71■■□□□ 1.07
GPN1-212ENST00000616939 NAIPQ13075 1403 aa21.7■■□□□ 1.06
GPN1-212ENST00000616939 EHBP1L1Q8N3D4 1523 aa21.68■■□□□ 1.06
GPN1-212ENST00000616939 PTPRKQ15262 1439 aa21.67■■□□□ 1.06
GPN1-212ENST00000616939 MYOM3Q5VTT5 1437 aa21.67■■□□□ 1.06
GPN1-212ENST00000616939 MSH5O43196 834 aa21.66■■□□□ 1.06
GPN1-212ENST00000616939 AKNAQ7Z591 1439 aa21.65■■□□□ 1.06
GPN1-212ENST00000616939 ARHGEF11O15085 1522 aa21.65■■□□□ 1.06
GPN1-212ENST00000616939 HIRIP3Q9BW71 556 aaPredicted RBP21.64■■□□□ 1.06
GPN1-212ENST00000616939 GRIN2BQ13224 1484 aa21.64■■□□□ 1.05
GPN1-212ENST00000616939 CDK11AQ9UQ88 783 aaPredicted RBP21.64■■□□□ 1.05
GPN1-212ENST00000616939 POLR1AO95602 1720 aaPredicted RBP21.63■■□□□ 1.05
GPN1-212ENST00000616939 MYT1LQ9UL68 1186 aa21.62■■□□□ 1.05
GPN1-212ENST00000616939 TCOF1Q13428 1488 aaKnown RBP21.61■■□□□ 1.05
GPN1-212ENST00000616939 FANCD2Q9BXW9 1451 aa21.61■■□□□ 1.05
GPN1-212ENST00000616939 UGGT2Q9NYU1 1516 aa21.61■■□□□ 1.05
GPN1-212ENST00000616939 MTUS2Q5JR59 1369 aa21.6■■□□□ 1.05
GPN1-212ENST00000616939 CNTLNQ9NXG0 1405 aa21.6■■□□□ 1.05
GPN1-212ENST00000616939 POLA1P09884 1462 aaPredicted RBP21.59■■□□□ 1.05
GPN1-212ENST00000616939 TOPBP1Q92547 1522 aa21.58■■□□□ 1.05
GPN1-212ENST00000616939 HNRNPUQ00839 825 aaKnown RBP eCLIP21.58■■□□□ 1.05
GPN1-212ENST00000616939 ABCA5Q8WWZ7 1642 aa21.57■■□□□ 1.04
GPN1-212ENST00000616939 P3H3Q8IVL6 736 aa21.56■■□□□ 1.04
GPN1-212ENST00000616939 PPP4R2Q9NY27 417 aa21.56■■□□□ 1.04
GPN1-212ENST00000616939 RAD54L2Q9Y4B4 1467 aa21.54■■□□□ 1.04
GPN1-212ENST00000616939 WASHC2AQ641Q2 1341 aa21.53■■□□□ 1.04
GPN1-212ENST00000616939 ATP1B4Q9UN42 357 aaPredicted RBP21.52■■□□□ 1.04
GPN1-212ENST00000616939 DENND4BO75064 1496 aaPredicted RBP21.51■■□□□ 1.03
GPN1-212ENST00000616939 NCOA1Q15788 1441 aa21.5■■□□□ 1.03
GPN1-212ENST00000616939 HSPA5P11021 654 aaKnown RBP21.49■■□□□ 1.03
GPN1-212ENST00000616939 ERICH6Q7L0X2 663 aa21.48■■□□□ 1.03
GPN1-212ENST00000616939 EIF4G2P78344 907 aaKnown RBP eCLIP21.45■■□□□ 1.03
GPN1-212ENST00000616939 ZBED9Q6R2W3 1325 aa21.45■■□□□ 1.02
GPN1-212ENST00000616939 CCDC7Q96M83 1385 aa21.43■■□□□ 1.02
GPN1-212ENST00000616939 MAGI3Q5TCQ9 1506 aa21.42■■□□□ 1.02
GPN1-212ENST00000616939 MIA2Q96PC5 1412 aa21.41■■□□□ 1.02
GPN1-212ENST00000616939 KDM6BO15054 1643 aa21.41■■□□□ 1.02
GPN1-212ENST00000616939 PRKRIP1Q9H875 184 aaPredicted RBP21.38■■□□□ 1.01
GPN1-212ENST00000616939 IRX6P78412 446 aaPredicted RBP21.36■■□□□ 1.01
GPN1-212ENST00000616939 TEX14Q8IWB6 1497 aa21.36■■□□□ 1.01
GPN1-212ENST00000616939 RPRD2Q5VT52 1461 aaKnown RBP21.35■■□□□ 1.01
GPN1-212ENST00000616939 LAMC3Q9Y6N6 1575 aa21.35■■□□□ 1.01
GPN1-212ENST00000616939 NESP48681 1621 aa21.34■■□□□ 1.01
GPN1-212ENST00000616939 SPATA31E1Q6ZUB1 1445 aa21.33■■□□□ 1
GPN1-212ENST00000616939 SMG6Q86US8 1419 aaKnown RBP21.32■■□□□ 1
GPN1-212ENST00000616939 ROCK1Q13464 1354 aa21.31■■□□□ 1
GPN1-212ENST00000616939 GAPVD1Q14C86 1478 aa21.3■■□□□ 1
GPN1-212ENST00000616939 URB2Q14146 1524 aaKnown RBP21.3■■□□□ 1
GPN1-212ENST00000616939 DNMT1P26358 1616 aaKnown RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms