RNA–Protein interactions for RNA: ENST00000616377.4

GTF2IP1-204, Transcript of general transcription factor IIi pseudogene 1, humanhuman

TSL 2 BASIC

Gene GTF2IP1, Length 2,632 nt, Biotype processed transcript, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IP1-204ENST00000616377 PHLDB1Q86UU1 1377 aa34.41■■■■□ 3.1
GTF2IP1-204ENST00000616377 SIN3AQ96ST3 1273 aa34.4■■■■□ 3.1
GTF2IP1-204ENST00000616377 WDR97A6NE52 1622 aa34.4■■■■□ 3.1
GTF2IP1-204ENST00000616377 DDX10Q13206 875 aaKnown RBP34.37■■■■□ 3.09
GTF2IP1-204ENST00000616377 CARMIL1Q5VZK9 1371 aa34.34■■■■□ 3.09
GTF2IP1-204ENST00000616377 FAM50AQ14320 339 aaKnown RBP34.33■■■■□ 3.09
GTF2IP1-204ENST00000616377 BCANQ96GW7 911 aa34.26■■■■□ 3.08
GTF2IP1-204ENST00000616377 PRDM2Q13029 1718 aa34.25■■■■□ 3.07
GTF2IP1-204ENST00000616377 PPP1R15AO75807 674 aaPredicted RBP34.24■■■■□ 3.07
GTF2IP1-204ENST00000616377 FHAD1B1AJZ9 1412 aa34.21■■■■□ 3.07
GTF2IP1-204ENST00000616377 FKBP8Q14318 412 aa34.2■■■■□ 3.07
GTF2IP1-204ENST00000616377 FGD5Q6ZNL6 1462 aa34.19■■■■□ 3.06
GTF2IP1-204ENST00000616377 CFAP43Q8NDM7 1665 aa34.19■■■■□ 3.06
GTF2IP1-204ENST00000616377 P3H3Q8IVL6 736 aa34.18■■■■□ 3.06
GTF2IP1-204ENST00000616377 PCF11O94913 1555 aaKnown RBP34.18■■■■□ 3.06
GTF2IP1-204ENST00000616377 HIRIP3Q9BW71 556 aaPredicted RBP34.16■■■■□ 3.06
GTF2IP1-204ENST00000616377 TIMELESSQ9UNS1 1208 aa34.16■■■■□ 3.06
GTF2IP1-204ENST00000616377 ATP1B4Q9UN42 357 aaPredicted RBP34.14■■■■□ 3.06
GTF2IP1-204ENST00000616377 ANP32EQ9BTT0 268 aa34.12■■■■□ 3.05
GTF2IP1-204ENST00000616377 CADPSQ9ULU8 1353 aa34.09■■■■□ 3.05
GTF2IP1-204ENST00000616377 FHOD3Q2V2M9 1422 aa34.04■■■■□ 3.04
GTF2IP1-204ENST00000616377 CCER2I3L3R5 266 aa34.03■■■■□ 3.04
GTF2IP1-204ENST00000616377 TRIM52Q96A61 297 aa34■■■■□ 3.03
GTF2IP1-204ENST00000616377 ANP32CO43423 234 aa34■■■■□ 3.03
GTF2IP1-204ENST00000616377 FYCO1Q9BQS8 1478 aa33.97■■■■□ 3.03
GTF2IP1-204ENST00000616377 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.96■■■■□ 3.03
GTF2IP1-204ENST00000616377 NEFLP07196 543 aa33.94■■■■□ 3.02
GTF2IP1-204ENST00000616377 CASKIN1Q8WXD9 1431 aa33.92■■■■□ 3.02
GTF2IP1-204ENST00000616377 TONSLQ96HA7 1378 aa33.87■■■■□ 3.01
GTF2IP1-204ENST00000616377 EFCAB5A4FU69 1503 aa33.86■■■■□ 3.01
GTF2IP1-204ENST00000616377 AQRO60306 1485 aaKnown RBP eCLIP33.86■■■■□ 3.01
GTF2IP1-204ENST00000616377 DNAJC5BQ9UF47 199 aa33.85■■■■□ 3.01
GTF2IP1-204ENST00000616377 FGD6Q6ZV73 1430 aa33.85■■■■□ 3.01
GTF2IP1-204ENST00000616377 RAD54L2Q9Y4B4 1467 aa33.82■■■■□ 3.01
GTF2IP1-204ENST00000616377 CCDC18Q5T9S5 1454 aa33.82■■■■□ 3
GTF2IP1-204ENST00000616377 RBM19Q9Y4C8 960 aaKnown RBP33.81■■■■□ 3
GTF2IP1-204ENST00000616377 PTPRKQ15262 1439 aa33.78■■■■□ 3
GTF2IP1-204ENST00000616377 FANCD2Q9BXW9 1451 aa33.78■■■■□ 3
GTF2IP1-204ENST00000616377 ABCA10Q8WWZ4 1543 aa33.75■■■□□ 2.99
GTF2IP1-204ENST00000616377 UACAQ9BZF9 1416 aa33.75■■■□□ 2.99
GTF2IP1-204ENST00000616377 HFM1A2PYH4 1435 aa33.75■■■□□ 2.99
GTF2IP1-204ENST00000616377 FMN1Q68DA7 1419 aa33.71■■■□□ 2.99
GTF2IP1-204ENST00000616377 PTPN23Q9H3S7 1636 aa33.7■■■□□ 2.99
GTF2IP1-204ENST00000616377 SNAPC4Q5SXM2 1469 aa33.7■■■□□ 2.99
GTF2IP1-204ENST00000616377 CTTNBP2Q8WZ74 1663 aa33.69■■■□□ 2.98
GTF2IP1-204ENST00000616377 MTUS2Q5JR59 1369 aa33.69■■■□□ 2.98
GTF2IP1-204ENST00000616377 NESP48681 1621 aa33.69■■■□□ 2.98
GTF2IP1-204ENST00000616377 DNMBPQ6XZF7 1577 aa33.69■■■□□ 2.98
GTF2IP1-204ENST00000616377 POLA1P09884 1462 aaPredicted RBP33.68■■■□□ 2.98
GTF2IP1-204ENST00000616377 CUL7Q14999 1698 aa33.65■■■□□ 2.98
GTF2IP1-204ENST00000616377 NAIPQ13075 1403 aa33.65■■■□□ 2.98
GTF2IP1-204ENST00000616377 TOPBP1Q92547 1522 aa33.63■■■□□ 2.97
GTF2IP1-204ENST00000616377 KDM5BQ9UGL1 1544 aa33.61■■■□□ 2.97
GTF2IP1-204ENST00000616377 NCOA2Q15596 1464 aa33.57■■■□□ 2.96
GTF2IP1-204ENST00000616377 LRRIQ1Q96JM4 1722 aa33.56■■■□□ 2.96
GTF2IP1-204ENST00000616377 MYOM3Q5VTT5 1437 aa33.56■■■□□ 2.96
GTF2IP1-204ENST00000616377 HNRNPUQ00839 825 aaKnown RBP eCLIP33.56■■■□□ 2.96
GTF2IP1-204ENST00000616377 SAMD9Q5K651 1589 aa33.48■■■□□ 2.95
GTF2IP1-204ENST00000616377 GRIN2BQ13224 1484 aa33.48■■■□□ 2.95
GTF2IP1-204ENST00000616377 WASHC2AQ641Q2 1341 aa33.47■■■□□ 2.95
GTF2IP1-204ENST00000616377 IRX6P78412 446 aaPredicted RBP33.46■■■□□ 2.95
GTF2IP1-204ENST00000616377 HSPA5P11021 654 aaKnown RBP33.45■■■□□ 2.94
GTF2IP1-204ENST00000616377 SUPT6HQ7KZ85 1726 aaKnown RBP33.43■■■□□ 2.94
GTF2IP1-204ENST00000616377 LAMC3Q9Y6N6 1575 aa33.43■■■□□ 2.94
GTF2IP1-204ENST00000616377 MSH5O43196 834 aa33.42■■■□□ 2.94
GTF2IP1-204ENST00000616377 RRP7BPQ9NSQ0 103 aa33.41■■■□□ 2.94
GTF2IP1-204ENST00000616377 EHBP1L1Q8N3D4 1523 aa33.39■■■□□ 2.94
GTF2IP1-204ENST00000616377 DENND4BO75064 1496 aaPredicted RBP33.37■■■□□ 2.93
GTF2IP1-204ENST00000616377 UGGT2Q9NYU1 1516 aa33.36■■■□□ 2.93
GTF2IP1-204ENST00000616377 CHIC2Q9UKJ5 165 aa33.36■■■□□ 2.93
GTF2IP1-204ENST00000616377 THOC2Q8NI27 1593 aaKnown RBP33.35■■■□□ 2.93
GTF2IP1-204ENST00000616377 TDRD9Q8NDG6 1382 aaKnown RBP33.34■■■□□ 2.93
GTF2IP1-204ENST00000616377 BCL11AQ9H165 835 aa33.34■■■□□ 2.93
GTF2IP1-204ENST00000616377 MAGI3Q5TCQ9 1506 aa33.33■■■□□ 2.93
GTF2IP1-204ENST00000616377 ARHGEF11O15085 1522 aa33.32■■■□□ 2.93
GTF2IP1-204ENST00000616377 CCDC184Q52MB2 194 aa33.31■■■□□ 2.92
GTF2IP1-204ENST00000616377 EIF4G2P78344 907 aaKnown RBP eCLIP33.3■■■□□ 2.92
GTF2IP1-204ENST00000616377 CDK11AQ9UQ88 783 aaPredicted RBP33.3■■■□□ 2.92
GTF2IP1-204ENST00000616377 URB2Q14146 1524 aaKnown RBP33.28■■■□□ 2.92
GTF2IP1-204ENST00000616377 HECW1Q76N89 1606 aa33.28■■■□□ 2.92
GTF2IP1-204ENST00000616377 ABCA5Q8WWZ7 1642 aa33.27■■■□□ 2.92
GTF2IP1-204ENST00000616377 GCC2Q8IWJ2 1684 aa33.26■■■□□ 2.92
GTF2IP1-204ENST00000616377 KDM6BO15054 1643 aa33.26■■■□□ 2.92
GTF2IP1-204ENST00000616377 CNTLNQ9NXG0 1405 aa33.26■■■□□ 2.91
GTF2IP1-204ENST00000616377 FANCIQ9NVI1 1328 aa33.25■■■□□ 2.91
GTF2IP1-204ENST00000616377 TCOF1Q13428 1488 aaKnown RBP33.25■■■□□ 2.91
GTF2IP1-204ENST00000616377 GAPVD1Q14C86 1478 aa33.24■■■□□ 2.91
GTF2IP1-204ENST00000616377 C11orf95C9JLR9 678 aaPredicted RBP33.22■■■□□ 2.91
GTF2IP1-204ENST00000616377 L3MBTL2Q969R5 705 aa33.2■■■□□ 2.91
GTF2IP1-204ENST00000616377 PDS5BQ9NTI5 1447 aa33.2■■■□□ 2.91
GTF2IP1-204ENST00000616377 MPHOSPH9Q99550 1183 aa33.2■■■□□ 2.91
GTF2IP1-204ENST00000616377 ERICH6BQ5W0A0 696 aa33.18■■■□□ 2.9
GTF2IP1-204ENST00000616377 AKNAQ7Z591 1439 aa33.17■■■□□ 2.9
GTF2IP1-204ENST00000616377 FOXD1Q16676 465 aa33.16■■■□□ 2.9
GTF2IP1-204ENST00000616377 PRKRIP1Q9H875 184 aaPredicted RBP33.16■■■□□ 2.9
GTF2IP1-204ENST00000616377 KIF21AQ7Z4S6 1674 aa33.15■■■□□ 2.9
GTF2IP1-204ENST00000616377 PPP4R2Q9NY27 417 aa33.15■■■□□ 2.9
GTF2IP1-204ENST00000616377 NCOA1Q15788 1441 aa33.15■■■□□ 2.9
GTF2IP1-204ENST00000616377 CCDC7Q96M83 1385 aa33.14■■■□□ 2.9
GTF2IP1-204ENST00000616377 FAM9BQ8IZU0 186 aa33.13■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms