RNA–Protein interactions for RNA: ENST00000613593.1

PCDHA12-202, Transcript of protocadherin alpha 12, humanhuman

BASIC

Gene PCDHA12, Length 2,588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-202ENST00000613593 MAPKBP1O60336 1514 aa25.07■■□□□ 1.6
PCDHA12-202ENST00000613593 BCANQ96GW7 911 aa25.06■■□□□ 1.6
PCDHA12-202ENST00000613593 DNMBPQ6XZF7 1577 aa25.03■■□□□ 1.6
PCDHA12-202ENST00000613593 DDX10Q13206 875 aaKnown RBP25.01■■□□□ 1.59
PCDHA12-202ENST00000613593 SIN3AQ96ST3 1273 aa25■■□□□ 1.59
PCDHA12-202ENST00000613593 TOPBP1Q92547 1522 aa24.98■■□□□ 1.59
PCDHA12-202ENST00000613593 NESP48681 1621 aa24.97■■□□□ 1.59
PCDHA12-202ENST00000613593 ABCA10Q8WWZ4 1543 aa24.96■■□□□ 1.59
PCDHA12-202ENST00000613593 POLA1P09884 1462 aaPredicted RBP24.95■■□□□ 1.58
PCDHA12-202ENST00000613593 RAD54L2Q9Y4B4 1467 aa24.95■■□□□ 1.58
PCDHA12-202ENST00000613593 WDR97A6NE52 1622 aa24.95■■□□□ 1.58
PCDHA12-202ENST00000613593 FKBP8Q14318 412 aa24.95■■□□□ 1.58
PCDHA12-202ENST00000613593 ANP32EQ9BTT0 268 aa24.94■■□□□ 1.58
PCDHA12-202ENST00000613593 SETD5Q9C0A6 1442 aa24.93■■□□□ 1.58
PCDHA12-202ENST00000613593 MAP3K1Q13233 1512 aa24.91■■□□□ 1.58
PCDHA12-202ENST00000613593 HIRIP3Q9BW71 556 aaPredicted RBP24.91■■□□□ 1.58
PCDHA12-202ENST00000613593 TIAM1Q13009 1591 aa24.89■■□□□ 1.58
PCDHA12-202ENST00000613593 PHLDB1Q86UU1 1377 aa24.89■■□□□ 1.57
PCDHA12-202ENST00000613593 FAM50AQ14320 339 aaKnown RBP24.88■■□□□ 1.57
PCDHA12-202ENST00000613593 PPP1R15AO75807 674 aaPredicted RBP24.86■■□□□ 1.57
PCDHA12-202ENST00000613593 LAMC3Q9Y6N6 1575 aa24.86■■□□□ 1.57
PCDHA12-202ENST00000613593 LRRC9Q6ZRR7 1453 aa24.83■■□□□ 1.57
PCDHA12-202ENST00000613593 FHAD1B1AJZ9 1412 aa24.82■■□□□ 1.56
PCDHA12-202ENST00000613593 CUL7Q14999 1698 aa24.81■■□□□ 1.56
PCDHA12-202ENST00000613593 URB2Q14146 1524 aaKnown RBP24.79■■□□□ 1.56
PCDHA12-202ENST00000613593 TRIM52Q96A61 297 aa24.79■■□□□ 1.56
PCDHA12-202ENST00000613593 P3H3Q8IVL6 736 aa24.78■■□□□ 1.56
PCDHA12-202ENST00000613593 PCF11O94913 1555 aaKnown RBP24.76■■□□□ 1.55
PCDHA12-202ENST00000613593 ATP1B4Q9UN42 357 aaPredicted RBP24.75■■□□□ 1.55
PCDHA12-202ENST00000613593 EFCAB5A4FU69 1503 aa24.74■■□□□ 1.55
PCDHA12-202ENST00000613593 CFAP43Q8NDM7 1665 aa24.74■■□□□ 1.55
PCDHA12-202ENST00000613593 FHOD3Q2V2M9 1422 aa24.72■■□□□ 1.55
PCDHA12-202ENST00000613593 CTTNBP2Q8WZ74 1663 aa24.7■■□□□ 1.54
PCDHA12-202ENST00000613593 PDS5BQ9NTI5 1447 aa24.69■■□□□ 1.54
PCDHA12-202ENST00000613593 RBM19Q9Y4C8 960 aaKnown RBP24.68■■□□□ 1.54
PCDHA12-202ENST00000613593 NEFLP07196 543 aa24.67■■□□□ 1.54
PCDHA12-202ENST00000613593 FYCO1Q9BQS8 1478 aa24.67■■□□□ 1.54
PCDHA12-202ENST00000613593 ANP32CO43423 234 aa24.67■■□□□ 1.54
PCDHA12-202ENST00000613593 CCER2I3L3R5 266 aa24.66■■□□□ 1.54
PCDHA12-202ENST00000613593 ABCA5Q8WWZ7 1642 aa24.66■■□□□ 1.54
PCDHA12-202ENST00000613593 TIMELESSQ9UNS1 1208 aa24.65■■□□□ 1.54
PCDHA12-202ENST00000613593 AQRO60306 1485 aaKnown RBP eCLIP24.64■■□□□ 1.54
PCDHA12-202ENST00000613593 CASKIN1Q8WXD9 1431 aa24.64■■□□□ 1.53
PCDHA12-202ENST00000613593 TDRD9Q8NDG6 1382 aaKnown RBP24.63■■□□□ 1.53
PCDHA12-202ENST00000613593 DNAJC5BQ9UF47 199 aa24.62■■□□□ 1.53
PCDHA12-202ENST00000613593 GAPVD1Q14C86 1478 aa24.61■■□□□ 1.53
PCDHA12-202ENST00000613593 KIF21AQ7Z4S6 1674 aa24.57■■□□□ 1.52
PCDHA12-202ENST00000613593 FMN1Q68DA7 1419 aa24.57■■□□□ 1.52
PCDHA12-202ENST00000613593 SNAPC4Q5SXM2 1469 aa24.52■■□□□ 1.52
PCDHA12-202ENST00000613593 SAMD9Q5K651 1589 aa24.51■■□□□ 1.51
PCDHA12-202ENST00000613593 TONSLQ96HA7 1378 aa24.51■■□□□ 1.51
PCDHA12-202ENST00000613593 TARBP1Q13395 1621 aaKnown RBP24.49■■□□□ 1.51
PCDHA12-202ENST00000613593 BCL11AQ9H165 835 aa24.48■■□□□ 1.51
PCDHA12-202ENST00000613593 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.46■■□□□ 1.51
PCDHA12-202ENST00000613593 PTPRKQ15262 1439 aa24.45■■□□□ 1.5
PCDHA12-202ENST00000613593 MSH5O43196 834 aa24.45■■□□□ 1.5
PCDHA12-202ENST00000613593 IRX6P78412 446 aaPredicted RBP24.44■■□□□ 1.5
PCDHA12-202ENST00000613593 CCDC18Q5T9S5 1454 aa24.43■■□□□ 1.5
PCDHA12-202ENST00000613593 FGD6Q6ZV73 1430 aa24.42■■□□□ 1.5
PCDHA12-202ENST00000613593 HNRNPUQ00839 825 aaKnown RBP eCLIP24.41■■□□□ 1.5
PCDHA12-202ENST00000613593 MTUS2Q5JR59 1369 aa24.39■■□□□ 1.49
PCDHA12-202ENST00000613593 GRIN2BQ13224 1484 aa24.39■■□□□ 1.49
PCDHA12-202ENST00000613593 THOC2Q8NI27 1593 aaKnown RBP24.37■■□□□ 1.49
PCDHA12-202ENST00000613593 LRRIQ1Q96JM4 1722 aa24.36■■□□□ 1.49
PCDHA12-202ENST00000613593 UACAQ9BZF9 1416 aa24.36■■□□□ 1.49
PCDHA12-202ENST00000613593 PBRM1Q86U86 1689 aa24.34■■□□□ 1.49
PCDHA12-202ENST00000613593 HFM1A2PYH4 1435 aa24.34■■□□□ 1.49
PCDHA12-202ENST00000613593 PTPN23Q9H3S7 1636 aa24.32■■□□□ 1.48
PCDHA12-202ENST00000613593 MRC2Q9UBG0 1479 aa24.32■■□□□ 1.48
PCDHA12-202ENST00000613593 KDM5BQ9UGL1 1544 aa24.32■■□□□ 1.48
PCDHA12-202ENST00000613593 NAIPQ13075 1403 aa24.3■■□□□ 1.48
PCDHA12-202ENST00000613593 WASHC2AQ641Q2 1341 aa24.29■■□□□ 1.48
PCDHA12-202ENST00000613593 NCOA2Q15596 1464 aa24.29■■□□□ 1.48
PCDHA12-202ENST00000613593 ADAMTS12P58397 1594 aa24.28■■□□□ 1.48
PCDHA12-202ENST00000613593 EHBP1L1Q8N3D4 1523 aa24.28■■□□□ 1.48
PCDHA12-202ENST00000613593 HSPA5P11021 654 aaKnown RBP24.27■■□□□ 1.48
PCDHA12-202ENST00000613593 MYOM3Q5VTT5 1437 aa24.26■■□□□ 1.47
PCDHA12-202ENST00000613593 CCDC184Q52MB2 194 aa24.26■■□□□ 1.47
PCDHA12-202ENST00000613593 SUPT6HQ7KZ85 1726 aaKnown RBP24.25■■□□□ 1.47
PCDHA12-202ENST00000613593 IQGAP2Q13576 1575 aa24.25■■□□□ 1.47
PCDHA12-202ENST00000613593 CDK11AQ9UQ88 783 aaPredicted RBP24.24■■□□□ 1.47
PCDHA12-202ENST00000613593 RRP7BPQ9NSQ0 103 aa24.22■■□□□ 1.47
PCDHA12-202ENST00000613593 CHIC2Q9UKJ5 165 aa24.2■■□□□ 1.46
PCDHA12-202ENST00000613593 UGGT2Q9NYU1 1516 aa24.2■■□□□ 1.46
PCDHA12-202ENST00000613593 FANCIQ9NVI1 1328 aa24.19■■□□□ 1.46
PCDHA12-202ENST00000613593 MAGI3Q5TCQ9 1506 aa24.19■■□□□ 1.46
PCDHA12-202ENST00000613593 ARHGEF11O15085 1522 aa24.19■■□□□ 1.46
PCDHA12-202ENST00000613593 HECW1Q76N89 1606 aa24.18■■□□□ 1.46
PCDHA12-202ENST00000613593 IFT140Q96RY7 1462 aa24.17■■□□□ 1.46
PCDHA12-202ENST00000613593 C11orf95C9JLR9 678 aaPredicted RBP24.14■■□□□ 1.46
PCDHA12-202ENST00000613593 DENND4BO75064 1496 aaPredicted RBP24.14■■□□□ 1.45
PCDHA12-202ENST00000613593 WDR62O43379 1518 aa24.13■■□□□ 1.45
PCDHA12-202ENST00000613593 ZNF608Q9ULD9 1512 aaPredicted RBP24.13■■□□□ 1.45
PCDHA12-202ENST00000613593 EPRSP07814 1512 aaKnown RBP24.12■■□□□ 1.45
PCDHA12-202ENST00000613593 EIF4G2P78344 907 aaKnown RBP eCLIP24.12■■□□□ 1.45
PCDHA12-202ENST00000613593 FAM9BQ8IZU0 186 aa24.1■■□□□ 1.45
PCDHA12-202ENST00000613593 PPP4R2Q9NY27 417 aa24.1■■□□□ 1.45
PCDHA12-202ENST00000613593 FOXD1Q16676 465 aa24.08■■□□□ 1.45
PCDHA12-202ENST00000613593 TCOF1Q13428 1488 aaKnown RBP24.08■■□□□ 1.45
PCDHA12-202ENST00000613593 CNTLNQ9NXG0 1405 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms