RNA–Protein interactions for RNA: ENST00000613593.1

PCDHA12-202, Transcript of protocadherin alpha 12, humanhuman

BASIC

Gene PCDHA12, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-202ENST00000613593 MAPKBP1O60336 1514 aa25.07■■□□□ 1.6
PCDHA12-202ENST00000613593 BCANQ96GW7 911 aa25.06■■□□□ 1.6
PCDHA12-202ENST00000613593 DNMBPQ6XZF7 1577 aa25.03■■□□□ 1.6
PCDHA12-202ENST00000613593 DDX10Q13206 875 aaKnown RBP25.01■■□□□ 1.59
PCDHA12-202ENST00000613593 SIN3AQ96ST3 1273 aa25■■□□□ 1.59
PCDHA12-202ENST00000613593 TOPBP1Q92547 1522 aa24.98■■□□□ 1.59
PCDHA12-202ENST00000613593 NESP48681 1621 aa24.97■■□□□ 1.59
PCDHA12-202ENST00000613593 ABCA10Q8WWZ4 1543 aa24.96■■□□□ 1.59
PCDHA12-202ENST00000613593 POLA1P09884 1462 aaPredicted RBP24.95■■□□□ 1.58
PCDHA12-202ENST00000613593 RAD54L2Q9Y4B4 1467 aa24.95■■□□□ 1.58
PCDHA12-202ENST00000613593 WDR97A6NE52 1622 aa24.95■■□□□ 1.58
PCDHA12-202ENST00000613593 FKBP8Q14318 412 aa24.95■■□□□ 1.58
PCDHA12-202ENST00000613593 ANP32EQ9BTT0 268 aa24.94■■□□□ 1.58
PCDHA12-202ENST00000613593 SETD5Q9C0A6 1442 aa24.93■■□□□ 1.58
PCDHA12-202ENST00000613593 MAP3K1Q13233 1512 aa24.91■■□□□ 1.58
PCDHA12-202ENST00000613593 HIRIP3Q9BW71 556 aaPredicted RBP24.91■■□□□ 1.58
PCDHA12-202ENST00000613593 TIAM1Q13009 1591 aa24.89■■□□□ 1.58
PCDHA12-202ENST00000613593 PHLDB1Q86UU1 1377 aa24.89■■□□□ 1.57
PCDHA12-202ENST00000613593 FAM50AQ14320 339 aaKnown RBP24.88■■□□□ 1.57
PCDHA12-202ENST00000613593 PPP1R15AO75807 674 aaPredicted RBP24.86■■□□□ 1.57
PCDHA12-202ENST00000613593 LAMC3Q9Y6N6 1575 aa24.86■■□□□ 1.57
PCDHA12-202ENST00000613593 LRRC9Q6ZRR7 1453 aa24.83■■□□□ 1.57
PCDHA12-202ENST00000613593 FHAD1B1AJZ9 1412 aa24.82■■□□□ 1.56
PCDHA12-202ENST00000613593 CUL7Q14999 1698 aa24.81■■□□□ 1.56
PCDHA12-202ENST00000613593 URB2Q14146 1524 aaKnown RBP24.79■■□□□ 1.56
PCDHA12-202ENST00000613593 TRIM52Q96A61 297 aa24.79■■□□□ 1.56
PCDHA12-202ENST00000613593 P3H3Q8IVL6 736 aa24.78■■□□□ 1.56
PCDHA12-202ENST00000613593 PCF11O94913 1555 aaKnown RBP24.76■■□□□ 1.55
PCDHA12-202ENST00000613593 ATP1B4Q9UN42 357 aaPredicted RBP24.75■■□□□ 1.55
PCDHA12-202ENST00000613593 EFCAB5A4FU69 1503 aa24.74■■□□□ 1.55
PCDHA12-202ENST00000613593 CFAP43Q8NDM7 1665 aa24.74■■□□□ 1.55
PCDHA12-202ENST00000613593 FHOD3Q2V2M9 1422 aa24.72■■□□□ 1.55
PCDHA12-202ENST00000613593 CTTNBP2Q8WZ74 1663 aa24.7■■□□□ 1.54
PCDHA12-202ENST00000613593 PDS5BQ9NTI5 1447 aa24.69■■□□□ 1.54
PCDHA12-202ENST00000613593 RBM19Q9Y4C8 960 aaKnown RBP24.68■■□□□ 1.54
PCDHA12-202ENST00000613593 NEFLP07196 543 aa24.67■■□□□ 1.54
PCDHA12-202ENST00000613593 FYCO1Q9BQS8 1478 aa24.67■■□□□ 1.54
PCDHA12-202ENST00000613593 ANP32CO43423 234 aa24.67■■□□□ 1.54
PCDHA12-202ENST00000613593 CCER2I3L3R5 266 aa24.66■■□□□ 1.54
PCDHA12-202ENST00000613593 ABCA5Q8WWZ7 1642 aa24.66■■□□□ 1.54
PCDHA12-202ENST00000613593 TIMELESSQ9UNS1 1208 aa24.65■■□□□ 1.54
PCDHA12-202ENST00000613593 AQRO60306 1485 aaKnown RBP eCLIP24.64■■□□□ 1.54
PCDHA12-202ENST00000613593 CASKIN1Q8WXD9 1431 aa24.64■■□□□ 1.53
PCDHA12-202ENST00000613593 TDRD9Q8NDG6 1382 aaKnown RBP24.63■■□□□ 1.53
PCDHA12-202ENST00000613593 DNAJC5BQ9UF47 199 aa24.62■■□□□ 1.53
PCDHA12-202ENST00000613593 GAPVD1Q14C86 1478 aa24.61■■□□□ 1.53
PCDHA12-202ENST00000613593 KIF21AQ7Z4S6 1674 aa24.57■■□□□ 1.52
PCDHA12-202ENST00000613593 FMN1Q68DA7 1419 aa24.57■■□□□ 1.52
PCDHA12-202ENST00000613593 SNAPC4Q5SXM2 1469 aa24.52■■□□□ 1.52
PCDHA12-202ENST00000613593 SAMD9Q5K651 1589 aa24.51■■□□□ 1.51
PCDHA12-202ENST00000613593 TONSLQ96HA7 1378 aa24.51■■□□□ 1.51
PCDHA12-202ENST00000613593 TARBP1Q13395 1621 aaKnown RBP24.49■■□□□ 1.51
PCDHA12-202ENST00000613593 BCL11AQ9H165 835 aa24.48■■□□□ 1.51
PCDHA12-202ENST00000613593 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.46■■□□□ 1.51
PCDHA12-202ENST00000613593 PTPRKQ15262 1439 aa24.45■■□□□ 1.5
PCDHA12-202ENST00000613593 MSH5O43196 834 aa24.45■■□□□ 1.5
PCDHA12-202ENST00000613593 IRX6P78412 446 aaPredicted RBP24.44■■□□□ 1.5
PCDHA12-202ENST00000613593 CCDC18Q5T9S5 1454 aa24.43■■□□□ 1.5
PCDHA12-202ENST00000613593 FGD6Q6ZV73 1430 aa24.42■■□□□ 1.5
PCDHA12-202ENST00000613593 HNRNPUQ00839 825 aaKnown RBP eCLIP24.41■■□□□ 1.5
PCDHA12-202ENST00000613593 MTUS2Q5JR59 1369 aa24.39■■□□□ 1.49
PCDHA12-202ENST00000613593 GRIN2BQ13224 1484 aa24.39■■□□□ 1.49
PCDHA12-202ENST00000613593 THOC2Q8NI27 1593 aaKnown RBP24.37■■□□□ 1.49
PCDHA12-202ENST00000613593 LRRIQ1Q96JM4 1722 aa24.36■■□□□ 1.49
PCDHA12-202ENST00000613593 UACAQ9BZF9 1416 aa24.36■■□□□ 1.49
PCDHA12-202ENST00000613593 PBRM1Q86U86 1689 aa24.34■■□□□ 1.49
PCDHA12-202ENST00000613593 HFM1A2PYH4 1435 aa24.34■■□□□ 1.49
PCDHA12-202ENST00000613593 PTPN23Q9H3S7 1636 aa24.32■■□□□ 1.48
PCDHA12-202ENST00000613593 MRC2Q9UBG0 1479 aa24.32■■□□□ 1.48
PCDHA12-202ENST00000613593 KDM5BQ9UGL1 1544 aa24.32■■□□□ 1.48
PCDHA12-202ENST00000613593 NAIPQ13075 1403 aa24.3■■□□□ 1.48
PCDHA12-202ENST00000613593 WASHC2AQ641Q2 1341 aa24.29■■□□□ 1.48
PCDHA12-202ENST00000613593 NCOA2Q15596 1464 aa24.29■■□□□ 1.48
PCDHA12-202ENST00000613593 ADAMTS12P58397 1594 aa24.28■■□□□ 1.48
PCDHA12-202ENST00000613593 EHBP1L1Q8N3D4 1523 aa24.28■■□□□ 1.48
PCDHA12-202ENST00000613593 HSPA5P11021 654 aaKnown RBP24.27■■□□□ 1.48
PCDHA12-202ENST00000613593 MYOM3Q5VTT5 1437 aa24.26■■□□□ 1.47
PCDHA12-202ENST00000613593 CCDC184Q52MB2 194 aa24.26■■□□□ 1.47
PCDHA12-202ENST00000613593 SUPT6HQ7KZ85 1726 aaKnown RBP24.25■■□□□ 1.47
PCDHA12-202ENST00000613593 IQGAP2Q13576 1575 aa24.25■■□□□ 1.47
PCDHA12-202ENST00000613593 CDK11AQ9UQ88 783 aaPredicted RBP24.24■■□□□ 1.47
PCDHA12-202ENST00000613593 RRP7BPQ9NSQ0 103 aa24.22■■□□□ 1.47
PCDHA12-202ENST00000613593 CHIC2Q9UKJ5 165 aa24.2■■□□□ 1.46
PCDHA12-202ENST00000613593 UGGT2Q9NYU1 1516 aa24.2■■□□□ 1.46
PCDHA12-202ENST00000613593 FANCIQ9NVI1 1328 aa24.19■■□□□ 1.46
PCDHA12-202ENST00000613593 MAGI3Q5TCQ9 1506 aa24.19■■□□□ 1.46
PCDHA12-202ENST00000613593 ARHGEF11O15085 1522 aa24.19■■□□□ 1.46
PCDHA12-202ENST00000613593 HECW1Q76N89 1606 aa24.18■■□□□ 1.46
PCDHA12-202ENST00000613593 IFT140Q96RY7 1462 aa24.17■■□□□ 1.46
PCDHA12-202ENST00000613593 C11orf95C9JLR9 678 aaPredicted RBP24.14■■□□□ 1.46
PCDHA12-202ENST00000613593 DENND4BO75064 1496 aaPredicted RBP24.14■■□□□ 1.45
PCDHA12-202ENST00000613593 WDR62O43379 1518 aa24.13■■□□□ 1.45
PCDHA12-202ENST00000613593 ZNF608Q9ULD9 1512 aaPredicted RBP24.13■■□□□ 1.45
PCDHA12-202ENST00000613593 EPRSP07814 1512 aaKnown RBP24.12■■□□□ 1.45
PCDHA12-202ENST00000613593 EIF4G2P78344 907 aaKnown RBP eCLIP24.12■■□□□ 1.45
PCDHA12-202ENST00000613593 FAM9BQ8IZU0 186 aa24.1■■□□□ 1.45
PCDHA12-202ENST00000613593 PPP4R2Q9NY27 417 aa24.1■■□□□ 1.45
PCDHA12-202ENST00000613593 FOXD1Q16676 465 aa24.08■■□□□ 1.45
PCDHA12-202ENST00000613593 TCOF1Q13428 1488 aaKnown RBP24.08■■□□□ 1.45
PCDHA12-202ENST00000613593 CNTLNQ9NXG0 1405 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms