RNA–Protein interactions for RNA: ENST00000613593.1

PCDHA12-202, Transcript of protocadherin alpha 12, humanhuman

BASIC

Gene PCDHA12, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-202ENST00000613593 NISCHQ9Y2I1 1504 aa35.47■■■■□ 3.27
PCDHA12-202ENST00000613593 CCDC180Q9P1Z9 1646 aa30.31■■■□□ 2.44
PCDHA12-202ENST00000613593 SHROOM4Q9ULL8 1493 aa30.26■■■□□ 2.44
PCDHA12-202ENST00000613593 ZCCHC6Q5VYS8 1495 aaKnown RBP29.99■■■□□ 2.39
PCDHA12-202ENST00000613593 SUPT5HO00267 1087 aaKnown RBP29.92■■■□□ 2.38
PCDHA12-202ENST00000613593 MYO15BQ96JP2 1530 aa29.33■■■□□ 2.29
PCDHA12-202ENST00000613593 HRCP23327 699 aa29.25■■■□□ 2.27
PCDHA12-202ENST00000613593 CHIC1Q5VXU3 224 aa29.25■■■□□ 2.27
PCDHA12-202ENST00000613593 DCAF8L2P0C7V8 631 aa29.24■■■□□ 2.27
PCDHA12-202ENST00000613593 DCAF1Q9Y4B6 1507 aa29.19■■■□□ 2.26
PCDHA12-202ENST00000613593 PCGF6Q9BYE7 350 aa28.98■■■□□ 2.23
PCDHA12-202ENST00000613593 PPARGC1BQ86YN6 1023 aaKnown RBP28.77■■■□□ 2.2
PCDHA12-202ENST00000613593 LOC105371045A0A1W2PR82 267 aa28.56■■■□□ 2.16
PCDHA12-202ENST00000613593 ABCC9O60706 1549 aa28.26■■■□□ 2.11
PCDHA12-202ENST00000613593 SCRIBQ14160 1630 aa28.26■■■□□ 2.11
PCDHA12-202ENST00000613593 TRIM26Q12899 539 aaPredicted RBP28.15■■■□□ 2.1
PCDHA12-202ENST00000613593 NACADO15069 1562 aa28.05■■■□□ 2.08
PCDHA12-202ENST00000613593 RSF1Q96T23 1441 aaPredicted RBP27.96■■■□□ 2.07
PCDHA12-202ENST00000613593 TRIM41Q8WV44 630 aa27.7■■■□□ 2.02
PCDHA12-202ENST00000613593 FAM9AQ8IZU1 332 aaPredicted RBP27.68■■■□□ 2.02
PCDHA12-202ENST00000613593 RB1CC1Q8TDY2 1594 aa27.66■■■□□ 2.02
PCDHA12-202ENST00000613593 ZEB1P37275 1124 aaPredicted RBP27.65■■■□□ 2.02
PCDHA12-202ENST00000613593 CECR2Q9BXF3 1484 aa27.61■■■□□ 2.01
PCDHA12-202ENST00000613593 EHMT2Q96KQ7 1210 aa27.56■■■□□ 2
PCDHA12-202ENST00000613593 MROH2BQ7Z745 1585 aa27.52■■■□□ 2
PCDHA12-202ENST00000613593 SCAF1Q9H7N4 1312 aaKnown RBP27.39■■□□□ 1.98
PCDHA12-202ENST00000613593 WIZO95785 1651 aa27.35■■□□□ 1.97
PCDHA12-202ENST00000613593 BAZ1AQ9NRL2 1556 aaPredicted RBP27.27■■□□□ 1.96
PCDHA12-202ENST00000613593 PELP1Q8IZL8 1130 aaKnown RBP27.18■■□□□ 1.94
PCDHA12-202ENST00000613593 UNC13AQ9UPW8 1703 aa27.14■■□□□ 1.94
PCDHA12-202ENST00000613593 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.08■■□□□ 1.93
PCDHA12-202ENST00000613593 SMARCA4P51532 1647 aa27.05■■□□□ 1.92
PCDHA12-202ENST00000613593 TOP2AP11388 1531 aaKnown RBP27■■□□□ 1.91
PCDHA12-202ENST00000613593 EIF4G1Q04637 1599 aaKnown RBP26.98■■□□□ 1.91
PCDHA12-202ENST00000613593 CCER1Q8TC90 406 aaPredicted RBP26.95■■□□□ 1.9
PCDHA12-202ENST00000613593 ACIN1Q9UKV3 1341 aaKnown RBP26.86■■□□□ 1.89
PCDHA12-202ENST00000613593 NEUROD1Q13562 356 aa26.86■■□□□ 1.89
PCDHA12-202ENST00000613593 BICRAQ9NZM4 1560 aa26.84■■□□□ 1.89
PCDHA12-202ENST00000613593 CCDC88BA6NC98 1476 aa26.82■■□□□ 1.88
PCDHA12-202ENST00000613593 SMARCA2P51531 1590 aa26.82■■□□□ 1.88
PCDHA12-202ENST00000613593 TTBK1Q5TCY1 1321 aaPredicted RBP26.78■■□□□ 1.88
PCDHA12-202ENST00000613593 PABPN1Q86U42 306 aaKnown RBP eCLIP26.76■■□□□ 1.87
PCDHA12-202ENST00000613593 DIEXFQ68CQ4 756 aaKnown RBP26.72■■□□□ 1.87
PCDHA12-202ENST00000613593 ABCC8Q09428 1581 aa26.65■■□□□ 1.86
PCDHA12-202ENST00000613593 GTF3C3Q9Y5Q9 886 aa26.63■■□□□ 1.85
PCDHA12-202ENST00000613593 PEG3Q9GZU2 1588 aa26.6■■□□□ 1.85
PCDHA12-202ENST00000613593 WRNQ14191 1432 aaPredicted RBP eCLIP26.55■■□□□ 1.84
PCDHA12-202ENST00000613593 CEP162Q5TB80 1403 aa26.53■■□□□ 1.84
PCDHA12-202ENST00000613593 CENPBP07199 599 aaPredicted RBP26.52■■□□□ 1.84
PCDHA12-202ENST00000613593 SOGA1O94964 1423 aa26.48■■□□□ 1.83
PCDHA12-202ENST00000613593 TNIKQ9UKE5 1360 aa26.39■■□□□ 1.82
PCDHA12-202ENST00000613593 ATAD2BQ9ULI0 1458 aa26.39■■□□□ 1.82
PCDHA12-202ENST00000613593 RUSC2Q8N2Y8 1516 aa26.37■■□□□ 1.81
PCDHA12-202ENST00000613593 ZNF316A6NFI3 1004 aaPredicted RBP26.35■■□□□ 1.81
PCDHA12-202ENST00000613593 UBTFP17480 764 aaKnown RBP26.34■■□□□ 1.81
PCDHA12-202ENST00000613593 CSRNP3Q8WYN3 585 aa26.32■■□□□ 1.8
PCDHA12-202ENST00000613593 EEA1Q15075 1411 aa26.32■■□□□ 1.8
PCDHA12-202ENST00000613593 BAZ1BQ9UIG0 1483 aaKnown RBP26.3■■□□□ 1.8
PCDHA12-202ENST00000613593 YTHDC1Q96MU7 727 aaKnown RBP26.25■■□□□ 1.79
PCDHA12-202ENST00000613593 HNRNPUL2Q1KMD3 747 aaKnown RBP26.16■■□□□ 1.78
PCDHA12-202ENST00000613593 SYNJ1O43426 1573 aa26.15■■□□□ 1.78
PCDHA12-202ENST00000613593 MIER1Q8N108 512 aa26.14■■□□□ 1.78
PCDHA12-202ENST00000613593 GOLGA3Q08378 1498 aa26.12■■□□□ 1.77
PCDHA12-202ENST00000613593 CEP164Q9UPV0 1460 aa25.97■■□□□ 1.75
PCDHA12-202ENST00000613593 KIF21BO75037 1637 aa25.95■■□□□ 1.74
PCDHA12-202ENST00000613593 HMGXB3Q12766 1538 aa25.95■■□□□ 1.74
PCDHA12-202ENST00000613593 NCAPD3P42695 1498 aa25.94■■□□□ 1.74
PCDHA12-202ENST00000613593 CLIP1P30622 1438 aa25.91■■□□□ 1.74
PCDHA12-202ENST00000613593 TOP2BQ02880 1626 aa25.89■■□□□ 1.73
PCDHA12-202ENST00000613593 MYT1Q01538 1121 aa25.87■■□□□ 1.73
PCDHA12-202ENST00000613593 RANGAP1P46060 587 aaPredicted RBP25.86■■□□□ 1.73
PCDHA12-202ENST00000613593 VPS8Q8N3P4 1428 aa25.83■■□□□ 1.73
PCDHA12-202ENST00000613593 BIVM-ERCC5R4GMW8 1640 aa25.81■■□□□ 1.72
PCDHA12-202ENST00000613593 APLP2Q06481 763 aa25.77■■□□□ 1.72
PCDHA12-202ENST00000613593 RAPGEF2Q9Y4G8 1499 aa25.76■■□□□ 1.71
PCDHA12-202ENST00000613593 CFTRP13569 1480 aa25.67■■□□□ 1.7
PCDHA12-202ENST00000613593 CUX1P39880 1505 aa25.65■■□□□ 1.7
PCDHA12-202ENST00000613593 DHX57Q6P158 1386 aaKnown RBP25.59■■□□□ 1.69
PCDHA12-202ENST00000613593 ERICH3Q5RHP9 1530 aa25.58■■□□□ 1.69
PCDHA12-202ENST00000613593 PRXQ9BXM0 1461 aa25.58■■□□□ 1.69
PCDHA12-202ENST00000613593 KANK4Q5T7N3 995 aaPredicted RBP25.52■■□□□ 1.68
PCDHA12-202ENST00000613593 KIF27Q86VH2 1401 aa25.5■■□□□ 1.67
PCDHA12-202ENST00000613593 CLSPNQ9HAW4 1339 aa25.49■■□□□ 1.67
PCDHA12-202ENST00000613593 SUPT16HQ9Y5B9 1047 aaKnown RBP25.49■■□□□ 1.67
PCDHA12-202ENST00000613593 PRDM2Q13029 1718 aa25.48■■□□□ 1.67
PCDHA12-202ENST00000613593 ARAP1Q96P48 1450 aa25.44■■□□□ 1.66
PCDHA12-202ENST00000613593 CADPSQ9ULU8 1353 aa25.4■■□□□ 1.66
PCDHA12-202ENST00000613593 CC2D2AQ9P2K1 1620 aa25.33■■□□□ 1.65
PCDHA12-202ENST00000613593 RRBP1Q9P2E9 1410 aaKnown RBP25.3■■□□□ 1.64
PCDHA12-202ENST00000613593 ITGAEP38570 1179 aa25.29■■□□□ 1.64
PCDHA12-202ENST00000613593 KCNH8Q96L42 1107 aa25.29■■□□□ 1.64
PCDHA12-202ENST00000613593 CUX2O14529 1486 aa25.27■■□□□ 1.64
PCDHA12-202ENST00000613593 TSHZ2Q9NRE2 1034 aa25.23■■□□□ 1.63
PCDHA12-202ENST00000613593 FGD5Q6ZNL6 1462 aa25.22■■□□□ 1.63
PCDHA12-202ENST00000613593 IGF1RP08069 1367 aa25.21■■□□□ 1.63
PCDHA12-202ENST00000613593 CCNB3Q8WWL7 1395 aa25.21■■□□□ 1.63
PCDHA12-202ENST00000613593 ARHGAP35Q9NRY4 1499 aa25.18■■□□□ 1.62
PCDHA12-202ENST00000613593 FANCD2Q9BXW9 1451 aa25.15■■□□□ 1.62
PCDHA12-202ENST00000613593 CARMIL1Q5VZK9 1371 aa25.1■■□□□ 1.61
PCDHA12-202ENST00000613593 RAB3GAP2Q9H2M9 1393 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms