RNA–Protein interactions for RNA: ENST00000613509.1

ZNF48-205, Transcript of zinc finger protein 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF48, Length 3,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48-205ENST00000613509 BICRAQ9NZM4 1560 aa24.74■■□□□ 1.55
ZNF48-205ENST00000613509 ATAD2BQ9ULI0 1458 aa24.72■■□□□ 1.55
ZNF48-205ENST00000613509 SETD5Q9C0A6 1442 aa24.71■■□□□ 1.55
ZNF48-205ENST00000613509 CUX2O14529 1486 aa24.7■■□□□ 1.55
ZNF48-205ENST00000613509 HNRNPUQ00839 825 aaKnown RBP eCLIP24.7■■□□□ 1.54
ZNF48-205ENST00000613509 TOP2BQ02880 1626 aa24.69■■□□□ 1.54
ZNF48-205ENST00000613509 ARHGAP35Q9NRY4 1499 aa24.67■■□□□ 1.54
ZNF48-205ENST00000613509 ERICH3Q5RHP9 1530 aa24.65■■□□□ 1.54
ZNF48-205ENST00000613509 CDK11AQ9UQ88 783 aaPredicted RBP24.65■■□□□ 1.54
ZNF48-205ENST00000613509 CCER2I3L3R5 266 aa24.64■■□□□ 1.54
ZNF48-205ENST00000613509 KIF27Q86VH2 1401 aa24.6■■□□□ 1.53
ZNF48-205ENST00000613509 PHLDB1Q86UU1 1377 aa24.6■■□□□ 1.53
ZNF48-205ENST00000613509 PEG3Q9GZU2 1588 aa24.59■■□□□ 1.53
ZNF48-205ENST00000613509 TONSLQ96HA7 1378 aa24.52■■□□□ 1.52
ZNF48-205ENST00000613509 CUX1P39880 1505 aa24.47■■□□□ 1.51
ZNF48-205ENST00000613509 BIVM-ERCC5R4GMW8 1640 aa24.47■■□□□ 1.51
ZNF48-205ENST00000613509 FANCIQ9NVI1 1328 aa24.44■■□□□ 1.5
ZNF48-205ENST00000613509 PRKCSHP14314 528 aaPredicted RBP24.43■■□□□ 1.5
ZNF48-205ENST00000613509 B4GALNT3Q6L9W6 998 aa24.43■■□□□ 1.5
ZNF48-205ENST00000613509 TIAM1Q13009 1591 aa24.43■■□□□ 1.5
ZNF48-205ENST00000613509 LRRC9Q6ZRR7 1453 aa24.43■■□□□ 1.5
ZNF48-205ENST00000613509 CNGB1Q14028 1251 aaPredicted RBP24.42■■□□□ 1.5
ZNF48-205ENST00000613509 NBR1Q14596 966 aa24.4■■□□□ 1.5
ZNF48-205ENST00000613509 FAM9BQ8IZU0 186 aa24.39■■□□□ 1.5
ZNF48-205ENST00000613509 TIMELESSQ9UNS1 1208 aa24.39■■□□□ 1.49
ZNF48-205ENST00000613509 CCDC184Q52MB2 194 aa24.37■■□□□ 1.49
ZNF48-205ENST00000613509 DEKP35659 375 aaKnown RBP24.35■■□□□ 1.49
ZNF48-205ENST00000613509 SENP3-EIF4A1A0A087X0R7 540 aa24.32■■□□□ 1.48
ZNF48-205ENST00000613509 IGF1RP08069 1367 aa24.31■■□□□ 1.48
ZNF48-205ENST00000613509 PPP4R2Q9NY27 417 aa24.31■■□□□ 1.48
ZNF48-205ENST00000613509 CARMIL1Q5VZK9 1371 aa24.3■■□□□ 1.48
ZNF48-205ENST00000613509 HSPA5P11021 654 aaKnown RBP24.27■■□□□ 1.48
ZNF48-205ENST00000613509 FHOD3Q2V2M9 1422 aa24.25■■□□□ 1.47
ZNF48-205ENST00000613509 WASHC2AQ641Q2 1341 aa24.24■■□□□ 1.47
ZNF48-205ENST00000613509 MRS2Q9HD23 443 aa24.22■■□□□ 1.47
ZNF48-205ENST00000613509 CHIC2Q9UKJ5 165 aa24.21■■□□□ 1.47
ZNF48-205ENST00000613509 PAK3O75914 559 aaPredicted RBP24.2■■□□□ 1.46
ZNF48-205ENST00000613509 CCDC18Q5T9S5 1454 aa24.19■■□□□ 1.46
ZNF48-205ENST00000613509 RRP7BPQ9NSQ0 103 aa24.18■■□□□ 1.46
ZNF48-205ENST00000613509 PCF11O94913 1555 aaKnown RBP24.18■■□□□ 1.46
ZNF48-205ENST00000613509 FHAD1B1AJZ9 1412 aa24.18■■□□□ 1.46
ZNF48-205ENST00000613509 NOP58Q9Y2X3 529 aaKnown RBP24.15■■□□□ 1.46
ZNF48-205ENST00000613509 MAP3K1Q13233 1512 aa24.15■■□□□ 1.46
ZNF48-205ENST00000613509 POLR3GLQ9BT43 218 aa24.12■■□□□ 1.45
ZNF48-205ENST00000613509 EIF4G2P78344 907 aaKnown RBP eCLIP24.12■■□□□ 1.45
ZNF48-205ENST00000613509 FOXD1Q16676 465 aa24.11■■□□□ 1.45
ZNF48-205ENST00000613509 PTPRKQ15262 1439 aa24.11■■□□□ 1.45
ZNF48-205ENST00000613509 MTUS2Q5JR59 1369 aa24.1■■□□□ 1.45
ZNF48-205ENST00000613509 C11orf95C9JLR9 678 aaPredicted RBP24.1■■□□□ 1.45
ZNF48-205ENST00000613509 AQRO60306 1485 aaKnown RBP eCLIP24.09■■□□□ 1.45
ZNF48-205ENST00000613509 FGD6Q6ZV73 1430 aa24.07■■□□□ 1.44
ZNF48-205ENST00000613509 UACAQ9BZF9 1416 aa24.06■■□□□ 1.44
ZNF48-205ENST00000613509 PRKRIP1Q9H875 184 aaPredicted RBP24.06■■□□□ 1.44
ZNF48-205ENST00000613509 DNAJC5BQ9UF47 199 aa24.05■■□□□ 1.44
ZNF48-205ENST00000613509 ERICH6BQ5W0A0 696 aa24.04■■□□□ 1.44
ZNF48-205ENST00000613509 CFTRP13569 1480 aa24.03■■□□□ 1.44
ZNF48-205ENST00000613509 MYT1LQ9UL68 1186 aa24.03■■□□□ 1.44
ZNF48-205ENST00000613509 CFAP43Q8NDM7 1665 aa24■■□□□ 1.43
ZNF48-205ENST00000613509 FGD5Q6ZNL6 1462 aa24■■□□□ 1.43
ZNF48-205ENST00000613509 CCDC136Q96JN2 1154 aa24■■□□□ 1.43
ZNF48-205ENST00000613509 ARID3CA6NKF2 412 aa23.99■■□□□ 1.43
ZNF48-205ENST00000613509 L3MBTL2Q969R5 705 aa23.99■■□□□ 1.43
ZNF48-205ENST00000613509 RTL5Q5HYW3 569 aaPredicted RBP23.97■■□□□ 1.43
ZNF48-205ENST00000613509 NPM2Q86SE8 214 aaKnown RBP23.97■■□□□ 1.43
ZNF48-205ENST00000613509 HFM1A2PYH4 1435 aa23.97■■□□□ 1.43
ZNF48-205ENST00000613509 AKNAQ7Z591 1439 aa23.97■■□□□ 1.43
ZNF48-205ENST00000613509 CNTLNQ9NXG0 1405 aa23.97■■□□□ 1.43
ZNF48-205ENST00000613509 ANP32AP39687 249 aaKnown RBP23.97■■□□□ 1.43
ZNF48-205ENST00000613509 ZBED9Q6R2W3 1325 aa23.97■■□□□ 1.43
ZNF48-205ENST00000613509 NAIPQ13075 1403 aa23.97■■□□□ 1.43
ZNF48-205ENST00000613509 PTPN23Q9H3S7 1636 aa23.94■■□□□ 1.42
ZNF48-205ENST00000613509 RTN4Q9NQC3 1192 aaKnown RBP23.94■■□□□ 1.42
ZNF48-205ENST00000613509 NCAPD3P42695 1498 aa23.93■■□□□ 1.42
ZNF48-205ENST00000613509 CASKIN1Q8WXD9 1431 aa23.92■■□□□ 1.42
ZNF48-205ENST00000613509 ANO8Q9HCE9 1232 aaPredicted RBP23.92■■□□□ 1.42
ZNF48-205ENST00000613509 ZBTB47Q9UFB7 747 aaPredicted RBP23.92■■□□□ 1.42
ZNF48-205ENST00000613509 FYCO1Q9BQS8 1478 aa23.91■■□□□ 1.42
ZNF48-205ENST00000613509 CCDC7Q96M83 1385 aa23.91■■□□□ 1.42
ZNF48-205ENST00000613509 FMN1Q68DA7 1419 aa23.9■■□□□ 1.42
ZNF48-205ENST00000613509 KDM5BQ9UGL1 1544 aa23.9■■□□□ 1.42
ZNF48-205ENST00000613509 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.9■■□□□ 1.42
ZNF48-205ENST00000613509 ZNF326Q5BKZ1 582 aaKnown RBP23.89■■□□□ 1.41
ZNF48-205ENST00000613509 IPO9Q96P70 1041 aaKnown RBP23.87■■□□□ 1.41
ZNF48-205ENST00000613509 NBPF8Q3BBV2 869 aa23.86■■□□□ 1.41
ZNF48-205ENST00000613509 MPHOSPH9Q99550 1183 aa23.86■■□□□ 1.41
ZNF48-205ENST00000613509 RAD54L2Q9Y4B4 1467 aa23.86■■□□□ 1.41
ZNF48-205ENST00000613509 HMGXB3Q12766 1538 aa23.84■■□□□ 1.41
ZNF48-205ENST00000613509 KIF7Q2M1P5 1343 aa23.83■■□□□ 1.41
ZNF48-205ENST00000613509 NCOA2Q15596 1464 aa23.83■■□□□ 1.4
ZNF48-205ENST00000613509 LAS1LQ9Y4W2 734 aaKnown RBP23.82■■□□□ 1.4
ZNF48-205ENST00000613509 IL27Q8NEV9 243 aa23.82■■□□□ 1.4
ZNF48-205ENST00000613509 SALL2Q9Y467 1007 aaPredicted RBP23.82■■□□□ 1.4
ZNF48-205ENST00000613509 CC2D2AQ9P2K1 1620 aa23.81■■□□□ 1.4
ZNF48-205ENST00000613509 MYOM3Q5VTT5 1437 aa23.8■■□□□ 1.4
ZNF48-205ENST00000613509 NUDCQ9Y266 331 aa23.78■■□□□ 1.4
ZNF48-205ENST00000613509 NCOA1Q15788 1441 aa23.76■■□□□ 1.39
ZNF48-205ENST00000613509 CADPSQ9ULU8 1353 aa23.76■■□□□ 1.39
ZNF48-205ENST00000613509 DENND4BO75064 1496 aaPredicted RBP23.72■■□□□ 1.39
ZNF48-205ENST00000613509 KDM6BO15054 1643 aa23.69■■□□□ 1.38
ZNF48-205ENST00000613509 SNAPC4Q5SXM2 1469 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms