RNA–Protein interactions for RNA: ENST00000613509.1

ZNF48-205, Transcript of zinc finger protein 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF48, Length 3,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48-205ENST00000613509 NISCHQ9Y2I1 1504 aa33.65■■■□□ 2.98
ZNF48-205ENST00000613509 SHROOM4Q9ULL8 1493 aa30.25■■■□□ 2.43
ZNF48-205ENST00000613509 SUPT5HO00267 1087 aaKnown RBP30.04■■■□□ 2.4
ZNF48-205ENST00000613509 HRCP23327 699 aa29.58■■■□□ 2.33
ZNF48-205ENST00000613509 PCGF6Q9BYE7 350 aa29.41■■■□□ 2.3
ZNF48-205ENST00000613509 PPARGC1BQ86YN6 1023 aaKnown RBP29.33■■■□□ 2.29
ZNF48-205ENST00000613509 MYO15BQ96JP2 1530 aa29.23■■■□□ 2.27
ZNF48-205ENST00000613509 CHIC1Q5VXU3 224 aa29.14■■■□□ 2.26
ZNF48-205ENST00000613509 DCAF8L2P0C7V8 631 aa28.88■■■□□ 2.21
ZNF48-205ENST00000613509 LOC105371045A0A1W2PR82 267 aa28.7■■■□□ 2.18
ZNF48-205ENST00000613509 ZCCHC6Q5VYS8 1495 aaKnown RBP28.53■■■□□ 2.16
ZNF48-205ENST00000613509 TRIM26Q12899 539 aaPredicted RBP28.26■■■□□ 2.11
ZNF48-205ENST00000613509 DCAF1Q9Y4B6 1507 aa28.26■■■□□ 2.11
ZNF48-205ENST00000613509 EHMT2Q96KQ7 1210 aa28.02■■■□□ 2.08
ZNF48-205ENST00000613509 SCAF1Q9H7N4 1312 aaKnown RBP27.94■■■□□ 2.06
ZNF48-205ENST00000613509 FAM9AQ8IZU1 332 aaPredicted RBP27.9■■■□□ 2.06
ZNF48-205ENST00000613509 PELP1Q8IZL8 1130 aaKnown RBP27.89■■■□□ 2.06
ZNF48-205ENST00000613509 CCDC180Q9P1Z9 1646 aa27.84■■■□□ 2.05
ZNF48-205ENST00000613509 ZEB1P37275 1124 aaPredicted RBP27.81■■■□□ 2.04
ZNF48-205ENST00000613509 TRIM41Q8WV44 630 aa27.63■■■□□ 2.01
ZNF48-205ENST00000613509 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.38■■□□□ 1.97
ZNF48-205ENST00000613509 NEUROD1Q13562 356 aa27.33■■□□□ 1.97
ZNF48-205ENST00000613509 ACIN1Q9UKV3 1341 aaKnown RBP27.27■■□□□ 1.96
ZNF48-205ENST00000613509 CCER1Q8TC90 406 aaPredicted RBP27.27■■□□□ 1.96
ZNF48-205ENST00000613509 TTBK1Q5TCY1 1321 aaPredicted RBP27.24■■□□□ 1.95
ZNF48-205ENST00000613509 GTF3C3Q9Y5Q9 886 aa27.19■■□□□ 1.94
ZNF48-205ENST00000613509 RSF1Q96T23 1441 aaPredicted RBP27.11■■□□□ 1.93
ZNF48-205ENST00000613509 DIEXFQ68CQ4 756 aaKnown RBP27.06■■□□□ 1.92
ZNF48-205ENST00000613509 ABCC9O60706 1549 aa27.05■■□□□ 1.92
ZNF48-205ENST00000613509 RB1CC1Q8TDY2 1594 aa27.01■■□□□ 1.91
ZNF48-205ENST00000613509 CENPBP07199 599 aaPredicted RBP27■■□□□ 1.91
ZNF48-205ENST00000613509 SCRIBQ14160 1630 aa26.94■■□□□ 1.9
ZNF48-205ENST00000613509 YTHDC1Q96MU7 727 aaKnown RBP26.9■■□□□ 1.9
ZNF48-205ENST00000613509 MYT1Q01538 1121 aa26.6■■□□□ 1.85
ZNF48-205ENST00000613509 CECR2Q9BXF3 1484 aa26.56■■□□□ 1.84
ZNF48-205ENST00000613509 ZNF316A6NFI3 1004 aaPredicted RBP26.52■■□□□ 1.84
ZNF48-205ENST00000613509 MIER1Q8N108 512 aa26.44■■□□□ 1.82
ZNF48-205ENST00000613509 MROH2BQ7Z745 1585 aa26.41■■□□□ 1.82
ZNF48-205ENST00000613509 HNRNPUL2Q1KMD3 747 aaKnown RBP26.37■■□□□ 1.81
ZNF48-205ENST00000613509 UBTFP17480 764 aaKnown RBP26.36■■□□□ 1.81
ZNF48-205ENST00000613509 WIZO95785 1651 aa26.32■■□□□ 1.8
ZNF48-205ENST00000613509 CEP162Q5TB80 1403 aa26.28■■□□□ 1.8
ZNF48-205ENST00000613509 ABCC8Q09428 1581 aa26.21■■□□□ 1.79
ZNF48-205ENST00000613509 CCDC88BA6NC98 1476 aa26.18■■□□□ 1.78
ZNF48-205ENST00000613509 SOGA1O94964 1423 aa26.14■■□□□ 1.78
ZNF48-205ENST00000613509 RANGAP1P46060 587 aaPredicted RBP26.12■■□□□ 1.77
ZNF48-205ENST00000613509 WRNQ14191 1432 aaPredicted RBP eCLIP26.11■■□□□ 1.77
ZNF48-205ENST00000613509 CSRNP3Q8WYN3 585 aa26.04■■□□□ 1.76
ZNF48-205ENST00000613509 RUSC2Q8N2Y8 1516 aa26.01■■□□□ 1.75
ZNF48-205ENST00000613509 TNIKQ9UKE5 1360 aa26.01■■□□□ 1.75
ZNF48-205ENST00000613509 BAZ1AQ9NRL2 1556 aaPredicted RBP25.91■■□□□ 1.74
ZNF48-205ENST00000613509 EIF4G1Q04637 1599 aaKnown RBP25.89■■□□□ 1.74
ZNF48-205ENST00000613509 APLP2Q06481 763 aa25.86■■□□□ 1.73
ZNF48-205ENST00000613509 PABPN1Q86U42 306 aaKnown RBP eCLIP25.85■■□□□ 1.73
ZNF48-205ENST00000613509 SUPT16HQ9Y5B9 1047 aaKnown RBP25.83■■□□□ 1.73
ZNF48-205ENST00000613509 GOLGA3Q08378 1498 aa25.73■■□□□ 1.71
ZNF48-205ENST00000613509 NACADO15069 1562 aa25.72■■□□□ 1.71
ZNF48-205ENST00000613509 BCANQ96GW7 911 aa25.68■■□□□ 1.7
ZNF48-205ENST00000613509 CLIP1P30622 1438 aa25.65■■□□□ 1.7
ZNF48-205ENST00000613509 TSHZ2Q9NRE2 1034 aa25.65■■□□□ 1.7
ZNF48-205ENST00000613509 TOP2AP11388 1531 aaKnown RBP25.64■■□□□ 1.7
ZNF48-205ENST00000613509 EEA1Q15075 1411 aa25.62■■□□□ 1.69
ZNF48-205ENST00000613509 SMARCA2P51531 1590 aa25.62■■□□□ 1.69
ZNF48-205ENST00000613509 KCNH8Q96L42 1107 aa25.56■■□□□ 1.68
ZNF48-205ENST00000613509 ITGAEP38570 1179 aa25.52■■□□□ 1.68
ZNF48-205ENST00000613509 ANP32EQ9BTT0 268 aa25.5■■□□□ 1.67
ZNF48-205ENST00000613509 VPS8Q8N3P4 1428 aa25.48■■□□□ 1.67
ZNF48-205ENST00000613509 CEP164Q9UPV0 1460 aa25.46■■□□□ 1.67
ZNF48-205ENST00000613509 SMARCA4P51532 1647 aa25.45■■□□□ 1.66
ZNF48-205ENST00000613509 DHX57Q6P158 1386 aaKnown RBP25.44■■□□□ 1.66
ZNF48-205ENST00000613509 CLSPNQ9HAW4 1339 aa25.42■■□□□ 1.66
ZNF48-205ENST00000613509 RAPGEF2Q9Y4G8 1499 aa25.38■■□□□ 1.65
ZNF48-205ENST00000613509 FKBP8Q14318 412 aa25.37■■□□□ 1.65
ZNF48-205ENST00000613509 KANK4Q5T7N3 995 aaPredicted RBP25.36■■□□□ 1.65
ZNF48-205ENST00000613509 BCL11AQ9H165 835 aa25.33■■□□□ 1.65
ZNF48-205ENST00000613509 SYNJ1O43426 1573 aa25.28■■□□□ 1.64
ZNF48-205ENST00000613509 KIF21BO75037 1637 aa25.25■■□□□ 1.63
ZNF48-205ENST00000613509 DDX10Q13206 875 aaKnown RBP25.24■■□□□ 1.63
ZNF48-205ENST00000613509 HIRIP3Q9BW71 556 aaPredicted RBP25.2■■□□□ 1.62
ZNF48-205ENST00000613509 TRIM52Q96A61 297 aa25.16■■□□□ 1.62
ZNF48-205ENST00000613509 NEFLP07196 543 aa25.13■■□□□ 1.61
ZNF48-205ENST00000613509 RBM19Q9Y4C8 960 aaKnown RBP25.1■■□□□ 1.61
ZNF48-205ENST00000613509 BAZ1BQ9UIG0 1483 aaKnown RBP25.09■■□□□ 1.61
ZNF48-205ENST00000613509 SIN3AQ96ST3 1273 aa25.06■■□□□ 1.6
ZNF48-205ENST00000613509 ARAP1Q96P48 1450 aa25■■□□□ 1.59
ZNF48-205ENST00000613509 CCNB3Q8WWL7 1395 aa24.99■■□□□ 1.59
ZNF48-205ENST00000613509 RAB3GAP2Q9H2M9 1393 aa24.96■■□□□ 1.59
ZNF48-205ENST00000613509 IRX6P78412 446 aaPredicted RBP24.93■■□□□ 1.58
ZNF48-205ENST00000613509 FAM50AQ14320 339 aaKnown RBP24.92■■□□□ 1.58
ZNF48-205ENST00000613509 UNC13AQ9UPW8 1703 aa24.92■■□□□ 1.58
ZNF48-205ENST00000613509 RRBP1Q9P2E9 1410 aaKnown RBP24.89■■□□□ 1.58
ZNF48-205ENST00000613509 ATP1B4Q9UN42 357 aaPredicted RBP24.89■■□□□ 1.58
ZNF48-205ENST00000613509 ANP32CO43423 234 aa24.86■■□□□ 1.57
ZNF48-205ENST00000613509 MSH5O43196 834 aa24.84■■□□□ 1.57
ZNF48-205ENST00000613509 WDR97A6NE52 1622 aa24.82■■□□□ 1.56
ZNF48-205ENST00000613509 PPP1R15AO75807 674 aaPredicted RBP24.8■■□□□ 1.56
ZNF48-205ENST00000613509 ERICH6Q7L0X2 663 aa24.79■■□□□ 1.56
ZNF48-205ENST00000613509 MAPKBP1O60336 1514 aa24.79■■□□□ 1.56
ZNF48-205ENST00000613509 PRXQ9BXM0 1461 aa24.75■■□□□ 1.55
ZNF48-205ENST00000613509 P3H3Q8IVL6 736 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms