RNA–Protein interactions for RNA: ENST00000613314.1

PCDHGA12-202, Transcript of protocadherin gamma subfamily A, 12, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA12, Length 2,634 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12-202ENST00000613314 RAB3GAP2Q9H2M9 1393 aa23.26■■□□□ 1.31
PCDHGA12-202ENST00000613314 ARAP1Q96P48 1450 aa23.24■■□□□ 1.31
PCDHGA12-202ENST00000613314 CCNB3Q8WWL7 1395 aa23.24■■□□□ 1.31
PCDHGA12-202ENST00000613314 SIN3AQ96ST3 1273 aa23.2■■□□□ 1.3
PCDHGA12-202ENST00000613314 NOP58Q9Y2X3 529 aaKnown RBP23.19■■□□□ 1.3
PCDHGA12-202ENST00000613314 PAK3O75914 559 aaPredicted RBP23.18■■□□□ 1.3
PCDHGA12-202ENST00000613314 ERICH6BQ5W0A0 696 aa23.17■■□□□ 1.3
PCDHGA12-202ENST00000613314 HNRNPUQ00839 825 aaKnown RBP eCLIP23.16■■□□□ 1.3
PCDHGA12-202ENST00000613314 CCDC136Q96JN2 1154 aa23.14■■□□□ 1.29
PCDHGA12-202ENST00000613314 PPP4R2Q9NY27 417 aa23.12■■□□□ 1.29
PCDHGA12-202ENST00000613314 IL27Q8NEV9 243 aa23.08■■□□□ 1.28
PCDHGA12-202ENST00000613314 B4GALNT3Q6L9W6 998 aa23.07■■□□□ 1.28
PCDHGA12-202ENST00000613314 SETD5Q9C0A6 1442 aa23.03■■□□□ 1.28
PCDHGA12-202ENST00000613314 RTN4Q9NQC3 1192 aaKnown RBP23.01■■□□□ 1.27
PCDHGA12-202ENST00000613314 RTL5Q5HYW3 569 aaPredicted RBP22.96■■□□□ 1.27
PCDHGA12-202ENST00000613314 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.96■■□□□ 1.27
PCDHGA12-202ENST00000613314 ERICH3Q5RHP9 1530 aa22.96■■□□□ 1.27
PCDHGA12-202ENST00000613314 TIMELESSQ9UNS1 1208 aa22.95■■□□□ 1.26
PCDHGA12-202ENST00000613314 PRXQ9BXM0 1461 aa22.92■■□□□ 1.26
PCDHGA12-202ENST00000613314 IPO9Q96P70 1041 aaKnown RBP22.88■■□□□ 1.25
PCDHGA12-202ENST00000613314 UBE2Q2Q8WVN8 375 aa22.87■■□□□ 1.25
PCDHGA12-202ENST00000613314 ANP32AP39687 249 aaKnown RBP22.84■■□□□ 1.25
PCDHGA12-202ENST00000613314 ARHGAP35Q9NRY4 1499 aa22.83■■□□□ 1.25
PCDHGA12-202ENST00000613314 ZBTB47Q9UFB7 747 aaPredicted RBP22.82■■□□□ 1.24
PCDHGA12-202ENST00000613314 CCDC184Q52MB2 194 aa22.81■■□□□ 1.24
PCDHGA12-202ENST00000613314 TOP2BQ02880 1626 aa22.8■■□□□ 1.24
PCDHGA12-202ENST00000613314 FAM50AQ14320 339 aaKnown RBP22.78■■□□□ 1.24
PCDHGA12-202ENST00000613314 PHLDB1Q86UU1 1377 aa22.78■■□□□ 1.24
PCDHGA12-202ENST00000613314 TONSLQ96HA7 1378 aa22.78■■□□□ 1.24
PCDHGA12-202ENST00000613314 WASHC2AQ641Q2 1341 aa22.77■■□□□ 1.24
PCDHGA12-202ENST00000613314 TIAM1Q13009 1591 aa22.76■■□□□ 1.23
PCDHGA12-202ENST00000613314 FAM9BQ8IZU0 186 aa22.71■■□□□ 1.23
PCDHGA12-202ENST00000613314 ZBED9Q6R2W3 1325 aa22.7■■□□□ 1.22
PCDHGA12-202ENST00000613314 LRRC9Q6ZRR7 1453 aa22.67■■□□□ 1.22
PCDHGA12-202ENST00000613314 BIVM-ERCC5R4GMW8 1640 aa22.67■■□□□ 1.22
PCDHGA12-202ENST00000613314 FHAD1B1AJZ9 1412 aa22.67■■□□□ 1.22
PCDHGA12-202ENST00000613314 PEG3Q9GZU2 1588 aa22.65■■□□□ 1.22
PCDHGA12-202ENST00000613314 UNC13AQ9UPW8 1703 aa22.65■■□□□ 1.22
PCDHGA12-202ENST00000613314 MAP3K1Q13233 1512 aa22.64■■□□□ 1.21
PCDHGA12-202ENST00000613314 NEFMP07197 916 aa22.63■■□□□ 1.21
PCDHGA12-202ENST00000613314 LAS1LQ9Y4W2 734 aaKnown RBP22.63■■□□□ 1.21
PCDHGA12-202ENST00000613314 AKNAQ7Z591 1439 aa22.63■■□□□ 1.21
PCDHGA12-202ENST00000613314 NCAPD3P42695 1498 aa22.62■■□□□ 1.21
PCDHGA12-202ENST00000613314 C11orf95C9JLR9 678 aaPredicted RBP22.62■■□□□ 1.21
PCDHGA12-202ENST00000613314 WASHC2CQ9Y4E1 1318 aa22.61■■□□□ 1.21
PCDHGA12-202ENST00000613314 MRS2Q9HD23 443 aa22.6■■□□□ 1.21
PCDHGA12-202ENST00000613314 KDM5BQ9UGL1 1544 aa22.6■■□□□ 1.21
PCDHGA12-202ENST00000613314 HSPA5P11021 654 aaKnown RBP22.59■■□□□ 1.21
PCDHGA12-202ENST00000613314 CNTLNQ9NXG0 1405 aa22.59■■□□□ 1.21
PCDHGA12-202ENST00000613314 NPM2Q86SE8 214 aaKnown RBP22.58■■□□□ 1.2
PCDHGA12-202ENST00000613314 BRPF3Q9ULD4 1205 aa22.58■■□□□ 1.2
PCDHGA12-202ENST00000613314 NCOA2Q15596 1464 aa22.58■■□□□ 1.2
PCDHGA12-202ENST00000613314 PRKRIP1Q9H875 184 aaPredicted RBP22.57■■□□□ 1.2
PCDHGA12-202ENST00000613314 USP35Q9P2H5 1018 aa22.55■■□□□ 1.2
PCDHGA12-202ENST00000613314 EIF5BO60841 1220 aaKnown RBP22.54■■□□□ 1.2
PCDHGA12-202ENST00000613314 KIF27Q86VH2 1401 aa22.52■■□□□ 1.19
PCDHGA12-202ENST00000613314 SMG6Q86US8 1419 aaKnown RBP22.51■■□□□ 1.19
PCDHGA12-202ENST00000613314 CCDC18Q5T9S5 1454 aa22.51■■□□□ 1.19
PCDHGA12-202ENST00000613314 RNF123Q5XPI4 1314 aa22.49■■□□□ 1.19
PCDHGA12-202ENST00000613314 CFAP43Q8NDM7 1665 aa22.48■■□□□ 1.19
PCDHGA12-202ENST00000613314 UACAQ9BZF9 1416 aa22.46■■□□□ 1.19
PCDHGA12-202ENST00000613314 NUDCQ9Y266 331 aa22.44■■□□□ 1.18
PCDHGA12-202ENST00000613314 EIF4G2P78344 907 aaKnown RBP eCLIP22.42■■□□□ 1.18
PCDHGA12-202ENST00000613314 PPM1GO15355 546 aaPredicted RBP22.41■■□□□ 1.18
PCDHGA12-202ENST00000613314 PCF11O94913 1555 aaKnown RBP22.41■■□□□ 1.18
PCDHGA12-202ENST00000613314 CUX1P39880 1505 aa22.41■■□□□ 1.18
PCDHGA12-202ENST00000613314 ATAD2BQ9ULI0 1458 aa22.41■■□□□ 1.18
PCDHGA12-202ENST00000613314 AQRO60306 1485 aaKnown RBP eCLIP22.4■■□□□ 1.18
PCDHGA12-202ENST00000613314 CCDC7Q96M83 1385 aa22.4■■□□□ 1.18
PCDHGA12-202ENST00000613314 GSE1Q14687 1217 aa22.39■■□□□ 1.17
PCDHGA12-202ENST00000613314 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.38■■□□□ 1.17
PCDHGA12-202ENST00000613314 PTPN23Q9H3S7 1636 aa22.38■■□□□ 1.17
PCDHGA12-202ENST00000613314 NCOA1Q15788 1441 aa22.38■■□□□ 1.17
PCDHGA12-202ENST00000613314 ATP1B4Q9UN42 357 aaPredicted RBP22.37■■□□□ 1.17
PCDHGA12-202ENST00000613314 SENP3-EIF4A1A0A087X0R7 540 aa22.37■■□□□ 1.17
PCDHGA12-202ENST00000613314 PDE4AP27815 886 aa22.36■■□□□ 1.17
PCDHGA12-202ENST00000613314 HFM1A2PYH4 1435 aa22.36■■□□□ 1.17
PCDHGA12-202ENST00000613314 PTPRKQ15262 1439 aa22.36■■□□□ 1.17
PCDHGA12-202ENST00000613314 PABPN1Q86U42 306 aaKnown RBP eCLIP22.36■■□□□ 1.17
PCDHGA12-202ENST00000613314 TCERG1O14776 1098 aaKnown RBP22.32■■□□□ 1.16
PCDHGA12-202ENST00000613314 BACH2Q9BYV9 841 aa22.32■■□□□ 1.16
PCDHGA12-202ENST00000613314 FGD6Q6ZV73 1430 aa22.3■■□□□ 1.16
PCDHGA12-202ENST00000613314 P3H3Q8IVL6 736 aa22.3■■□□□ 1.16
PCDHGA12-202ENST00000613314 FRAT1Q92837 279 aaPredicted RBP22.3■■□□□ 1.16
PCDHGA12-202ENST00000613314 NAIPQ13075 1403 aa22.29■■□□□ 1.16
PCDHGA12-202ENST00000613314 CNGB1Q14028 1251 aaPredicted RBP22.27■■□□□ 1.15
PCDHGA12-202ENST00000613314 NFKBIBQ15653 356 aa22.27■■□□□ 1.15
PCDHGA12-202ENST00000613314 PKNOX2Q96KN3 472 aa22.27■■□□□ 1.15
PCDHGA12-202ENST00000613314 BICRAQ9NZM4 1560 aa22.26■■□□□ 1.15
PCDHGA12-202ENST00000613314 EXOC6Q8TAG9 804 aa22.24■■□□□ 1.15
PCDHGA12-202ENST00000613314 KIF7Q2M1P5 1343 aa22.24■■□□□ 1.15
PCDHGA12-202ENST00000613314 RSPH6AQ9H0K4 717 aa22.23■■□□□ 1.15
PCDHGA12-202ENST00000613314 IGF1RP08069 1367 aa22.22■■□□□ 1.15
PCDHGA12-202ENST00000613314 FMN1Q68DA7 1419 aa22.21■■□□□ 1.15
PCDHGA12-202ENST00000613314 DENND4BO75064 1496 aaPredicted RBP22.21■■□□□ 1.15
PCDHGA12-202ENST00000613314 ABCA5Q8WWZ7 1642 aa22.2■■□□□ 1.14
PCDHGA12-202ENST00000613314 MS4A1P11836 297 aa22.19■■□□□ 1.14
PCDHGA12-202ENST00000613314 L3MBTL2Q969R5 705 aa22.19■■□□□ 1.14
PCDHGA12-202ENST00000613314 FHOD3Q2V2M9 1422 aa22.18■■□□□ 1.14
PCDHGA12-202ENST00000613314 RRP1P56182 461 aaKnown RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms