RNA–Protein interactions for RNA: ENST00000613314.1

PCDHGA12-202, Transcript of protocadherin gamma subfamily A, 12, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA12, Length 2,634 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12-202ENST00000613314 NISCHQ9Y2I1 1504 aa30.87■■■□□ 2.53
PCDHGA12-202ENST00000613314 HRCP23327 699 aa28.42■■■□□ 2.14
PCDHGA12-202ENST00000613314 PPARGC1BQ86YN6 1023 aaKnown RBP27.88■■■□□ 2.05
PCDHGA12-202ENST00000613314 PCGF6Q9BYE7 350 aa27.71■■■□□ 2.03
PCDHGA12-202ENST00000613314 PELP1Q8IZL8 1130 aaKnown RBP27.71■■■□□ 2.03
PCDHGA12-202ENST00000613314 SHROOM4Q9ULL8 1493 aa27.59■■■□□ 2.01
PCDHGA12-202ENST00000613314 MYO15BQ96JP2 1530 aa27.58■■■□□ 2.01
PCDHGA12-202ENST00000613314 SUPT5HO00267 1087 aaKnown RBP27.55■■■□□ 2
PCDHGA12-202ENST00000613314 CHIC1Q5VXU3 224 aa27.21■■□□□ 1.95
PCDHGA12-202ENST00000613314 SCAF1Q9H7N4 1312 aaKnown RBP27.08■■□□□ 1.93
PCDHGA12-202ENST00000613314 DCAF1Q9Y4B6 1507 aa26.97■■□□□ 1.91
PCDHGA12-202ENST00000613314 CCDC180Q9P1Z9 1646 aa26.73■■□□□ 1.87
PCDHGA12-202ENST00000613314 TRIM26Q12899 539 aaPredicted RBP26.72■■□□□ 1.87
PCDHGA12-202ENST00000613314 MYT1Q01538 1121 aa26.66■■□□□ 1.86
PCDHGA12-202ENST00000613314 LOC105371045A0A1W2PR82 267 aa26.63■■□□□ 1.85
PCDHGA12-202ENST00000613314 ZEB1P37275 1124 aaPredicted RBP26.53■■□□□ 1.84
PCDHGA12-202ENST00000613314 ZCCHC6Q5VYS8 1495 aaKnown RBP26.34■■□□□ 1.81
PCDHGA12-202ENST00000613314 ACIN1Q9UKV3 1341 aaKnown RBP26.29■■□□□ 1.8
PCDHGA12-202ENST00000613314 NEUROD1Q13562 356 aa26.23■■□□□ 1.79
PCDHGA12-202ENST00000613314 GTF3C3Q9Y5Q9 886 aa26.09■■□□□ 1.77
PCDHGA12-202ENST00000613314 CENPBP07199 599 aaPredicted RBP25.85■■□□□ 1.73
PCDHGA12-202ENST00000613314 DIEXFQ68CQ4 756 aaKnown RBP25.68■■□□□ 1.7
PCDHGA12-202ENST00000613314 DCAF8L2P0C7V8 631 aa25.62■■□□□ 1.69
PCDHGA12-202ENST00000613314 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.61■■□□□ 1.69
PCDHGA12-202ENST00000613314 CCER1Q8TC90 406 aaPredicted RBP25.52■■□□□ 1.68
PCDHGA12-202ENST00000613314 FAM9AQ8IZU1 332 aaPredicted RBP25.48■■□□□ 1.67
PCDHGA12-202ENST00000613314 EHMT2Q96KQ7 1210 aa25.41■■□□□ 1.66
PCDHGA12-202ENST00000613314 TRIM41Q8WV44 630 aa25.41■■□□□ 1.66
PCDHGA12-202ENST00000613314 YTHDC1Q96MU7 727 aaKnown RBP25.33■■□□□ 1.65
PCDHGA12-202ENST00000613314 ZNF316A6NFI3 1004 aaPredicted RBP25.12■■□□□ 1.61
PCDHGA12-202ENST00000613314 ABCC9O60706 1549 aa25.11■■□□□ 1.61
PCDHGA12-202ENST00000613314 BCL11AQ9H165 835 aa25.06■■□□□ 1.6
PCDHGA12-202ENST00000613314 TTBK1Q5TCY1 1321 aaPredicted RBP25.06■■□□□ 1.6
PCDHGA12-202ENST00000613314 MIER1Q8N108 512 aa25.03■■□□□ 1.6
PCDHGA12-202ENST00000613314 RB1CC1Q8TDY2 1594 aa25■■□□□ 1.59
PCDHGA12-202ENST00000613314 RSF1Q96T23 1441 aaPredicted RBP24.97■■□□□ 1.59
PCDHGA12-202ENST00000613314 ANP32EQ9BTT0 268 aa24.9■■□□□ 1.58
PCDHGA12-202ENST00000613314 SUPT16HQ9Y5B9 1047 aaKnown RBP24.78■■□□□ 1.56
PCDHGA12-202ENST00000613314 TSHZ2Q9NRE2 1034 aa24.76■■□□□ 1.55
PCDHGA12-202ENST00000613314 CSRNP3Q8WYN3 585 aa24.68■■□□□ 1.54
PCDHGA12-202ENST00000613314 WRNQ14191 1432 aaPredicted RBP eCLIP24.65■■□□□ 1.54
PCDHGA12-202ENST00000613314 CLSPNQ9HAW4 1339 aa24.63■■□□□ 1.53
PCDHGA12-202ENST00000613314 CEP162Q5TB80 1403 aa24.48■■□□□ 1.51
PCDHGA12-202ENST00000613314 SCRIBQ14160 1630 aa24.46■■□□□ 1.51
PCDHGA12-202ENST00000613314 HNRNPUL2Q1KMD3 747 aaKnown RBP24.35■■□□□ 1.49
PCDHGA12-202ENST00000613314 EIF4G1Q04637 1599 aaKnown RBP24.24■■□□□ 1.47
PCDHGA12-202ENST00000613314 TNIKQ9UKE5 1360 aa24.24■■□□□ 1.47
PCDHGA12-202ENST00000613314 BCANQ96GW7 911 aa24.23■■□□□ 1.47
PCDHGA12-202ENST00000613314 PRKCSHP14314 528 aaPredicted RBP24.19■■□□□ 1.46
PCDHGA12-202ENST00000613314 CECR2Q9BXF3 1484 aa24.19■■□□□ 1.46
PCDHGA12-202ENST00000613314 MROH2BQ7Z745 1585 aa24.19■■□□□ 1.46
PCDHGA12-202ENST00000613314 CCDC88BA6NC98 1476 aa24.16■■□□□ 1.46
PCDHGA12-202ENST00000613314 ABCC8Q09428 1581 aa24.16■■□□□ 1.46
PCDHGA12-202ENST00000613314 WIZO95785 1651 aa24.15■■□□□ 1.46
PCDHGA12-202ENST00000613314 RBM19Q9Y4C8 960 aaKnown RBP24.13■■□□□ 1.45
PCDHGA12-202ENST00000613314 SOGA1O94964 1423 aa24.1■■□□□ 1.45
PCDHGA12-202ENST00000613314 UBTFP17480 764 aaKnown RBP24.07■■□□□ 1.44
PCDHGA12-202ENST00000613314 FKBP8Q14318 412 aa24.05■■□□□ 1.44
PCDHGA12-202ENST00000613314 KCNH8Q96L42 1107 aa24.04■■□□□ 1.44
PCDHGA12-202ENST00000613314 MSH5O43196 834 aa23.98■■□□□ 1.43
PCDHGA12-202ENST00000613314 RUSC2Q8N2Y8 1516 aa23.96■■□□□ 1.43
PCDHGA12-202ENST00000613314 BAZ1AQ9NRL2 1556 aaPredicted RBP23.96■■□□□ 1.43
PCDHGA12-202ENST00000613314 DHX57Q6P158 1386 aaKnown RBP23.92■■□□□ 1.42
PCDHGA12-202ENST00000613314 GOLGA3Q08378 1498 aa23.91■■□□□ 1.42
PCDHGA12-202ENST00000613314 ITGAEP38570 1179 aa23.87■■□□□ 1.41
PCDHGA12-202ENST00000613314 EEA1Q15075 1411 aa23.87■■□□□ 1.41
PCDHGA12-202ENST00000613314 NACADO15069 1562 aa23.82■■□□□ 1.4
PCDHGA12-202ENST00000613314 NEFLP07196 543 aa23.78■■□□□ 1.4
PCDHGA12-202ENST00000613314 CLIP1P30622 1438 aa23.77■■□□□ 1.4
PCDHGA12-202ENST00000613314 VPS8Q8N3P4 1428 aa23.76■■□□□ 1.39
PCDHGA12-202ENST00000613314 APLP2Q06481 763 aa23.71■■□□□ 1.39
PCDHGA12-202ENST00000613314 FANCIQ9NVI1 1328 aa23.69■■□□□ 1.38
PCDHGA12-202ENST00000613314 ERICH6Q7L0X2 663 aa23.67■■□□□ 1.38
PCDHGA12-202ENST00000613314 CEP164Q9UPV0 1460 aa23.62■■□□□ 1.37
PCDHGA12-202ENST00000613314 TOP2AP11388 1531 aaKnown RBP23.62■■□□□ 1.37
PCDHGA12-202ENST00000613314 SMARCA2P51531 1590 aa23.6■■□□□ 1.37
PCDHGA12-202ENST00000613314 TRIM52Q96A61 297 aa23.6■■□□□ 1.37
PCDHGA12-202ENST00000613314 DEKP35659 375 aaKnown RBP23.59■■□□□ 1.37
PCDHGA12-202ENST00000613314 KIF21BO75037 1637 aa23.58■■□□□ 1.37
PCDHGA12-202ENST00000613314 DDX10Q13206 875 aaKnown RBP23.56■■□□□ 1.36
PCDHGA12-202ENST00000613314 RANGAP1P46060 587 aaPredicted RBP23.52■■□□□ 1.36
PCDHGA12-202ENST00000613314 ANO8Q9HCE9 1232 aaPredicted RBP23.5■■□□□ 1.35
PCDHGA12-202ENST00000613314 MYT1LQ9UL68 1186 aa23.5■■□□□ 1.35
PCDHGA12-202ENST00000613314 CDK11AQ9UQ88 783 aaPredicted RBP23.47■■□□□ 1.35
PCDHGA12-202ENST00000613314 BAZ1BQ9UIG0 1483 aaKnown RBP23.42■■□□□ 1.34
PCDHGA12-202ENST00000613314 RAPGEF2Q9Y4G8 1499 aa23.42■■□□□ 1.34
PCDHGA12-202ENST00000613314 PPP1R15AO75807 674 aaPredicted RBP23.41■■□□□ 1.34
PCDHGA12-202ENST00000613314 CUX2O14529 1486 aa23.41■■□□□ 1.34
PCDHGA12-202ENST00000613314 IRX6P78412 446 aaPredicted RBP23.4■■□□□ 1.34
PCDHGA12-202ENST00000613314 KANK4Q5T7N3 995 aaPredicted RBP23.39■■□□□ 1.33
PCDHGA12-202ENST00000613314 CCER2I3L3R5 266 aa23.38■■□□□ 1.33
PCDHGA12-202ENST00000613314 MAPKBP1O60336 1514 aa23.37■■□□□ 1.33
PCDHGA12-202ENST00000613314 RRBP1Q9P2E9 1410 aaKnown RBP23.36■■□□□ 1.33
PCDHGA12-202ENST00000613314 WDR97A6NE52 1622 aa23.36■■□□□ 1.33
PCDHGA12-202ENST00000613314 SYNJ1O43426 1573 aa23.32■■□□□ 1.32
PCDHGA12-202ENST00000613314 ANP32CO43423 234 aa23.3■■□□□ 1.32
PCDHGA12-202ENST00000613314 HIRIP3Q9BW71 556 aaPredicted RBP23.29■■□□□ 1.32
PCDHGA12-202ENST00000613314 SMARCA4P51532 1647 aa23.29■■□□□ 1.32
PCDHGA12-202ENST00000613314 SALL2Q9Y467 1007 aaPredicted RBP23.29■■□□□ 1.32
PCDHGA12-202ENST00000613314 NBR1Q14596 966 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms