RNA–Protein interactions for RNA: ENST00000612683.1

FDPS-221, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FDPS, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-221ENST00000612683 RUSC2Q8N2Y8 1516 aa25.57■■□□□ 1.68
FDPS-221ENST00000612683 KIAA0586Q9BVV6 1533 aa25.53■■□□□ 1.68
FDPS-221ENST00000612683 NPM1P06748 294 aaKnown RBP eCLIP25.53■■□□□ 1.683e-6■□□□□ 8.1
FDPS-221ENST00000612683 CUL7Q14999 1698 aa25.52■■□□□ 1.68
FDPS-221ENST00000612683 CARMIL1Q5VZK9 1371 aa25.52■■□□□ 1.68
FDPS-221ENST00000612683 TTBK1Q5TCY1 1321 aaPredicted RBP25.4■■□□□ 1.66
FDPS-221ENST00000612683 FAM69CQ0P6D2 419 aa25.4■■□□□ 1.66
FDPS-221ENST00000612683 KIF13AQ9H1H9 1805 aa25.36■■□□□ 1.65
FDPS-221ENST00000612683 AEBP2Q6ZN18 517 aaPredicted RBP25.36■■□□□ 1.65
FDPS-221ENST00000612683 PTPRGP23470 1445 aa25.35■■□□□ 1.65
FDPS-221ENST00000612683 ADCY10Q96PN6 1610 aa25.34■■□□□ 1.65
FDPS-221ENST00000612683 CARMIL2Q6F5E8 1435 aa25.32■■□□□ 1.64
FDPS-221ENST00000612683 ABCC10Q5T3U5 1492 aa25.31■■□□□ 1.64
FDPS-221ENST00000612683 MAPKBP1O60336 1514 aa25.28■■□□□ 1.64
FDPS-221ENST00000612683 TNIKQ9UKE5 1360 aa25.28■■□□□ 1.64
FDPS-221ENST00000612683 IQGAP2Q13576 1575 aa25.26■■□□□ 1.63
FDPS-221ENST00000612683 RAPGEF2Q9Y4G8 1499 aa25.25■■□□□ 1.63
FDPS-221ENST00000612683 DIP2BQ9P265 1576 aa25.19■■□□□ 1.62
FDPS-221ENST00000612683 DISP1Q96F81 1524 aa25.15■■□□□ 1.62
FDPS-221ENST00000612683 ABCC2Q92887 1545 aa25.13■■□□□ 1.61
FDPS-221ENST00000612683 UACAQ9BZF9 1416 aa25.12■■□□□ 1.61
FDPS-221ENST00000612683 TSPOAP1O95153 1857 aa25.1■■□□□ 1.61
FDPS-221ENST00000612683 UGGT2Q9NYU1 1516 aa25.1■■□□□ 1.61
FDPS-221ENST00000612683 UHRF1BP1LA0JNW5 1464 aa25.09■■□□□ 1.61
FDPS-221ENST00000612683 ASXL2Q76L83 1435 aa25.08■■□□□ 1.61
FDPS-221ENST00000612683 PLB1Q6P1J6 1458 aa25.05■■□□□ 1.6
FDPS-221ENST00000612683 KIAA0556O60303 1618 aa25.01■■□□□ 1.59
FDPS-221ENST00000612683 KDM6BO15054 1643 aa25■■□□□ 1.59
FDPS-221ENST00000612683 KDM5BQ9UGL1 1544 aa24.97■■□□□ 1.59
FDPS-221ENST00000612683 PRXQ9BXM0 1461 aa24.97■■□□□ 1.59
FDPS-221ENST00000612683 CTTNBP2Q8WZ74 1663 aa24.97■■□□□ 1.59
FDPS-221ENST00000612683 GLI2P10070 1586 aa24.94■■□□□ 1.58
FDPS-221ENST00000612683 GOLGA3Q08378 1498 aa24.94■■□□□ 1.58
FDPS-221ENST00000612683 CSRNP3Q8WYN3 585 aa24.92■■□□□ 1.58
FDPS-221ENST00000612683 ZCCHC11Q5TAX3 1644 aaKnown RBP24.9■■□□□ 1.58
FDPS-221ENST00000612683 EPRSP07814 1512 aaKnown RBP24.9■■□□□ 1.58
FDPS-221ENST00000612683 FAM9AQ8IZU1 332 aaPredicted RBP24.88■■□□□ 1.57
FDPS-221ENST00000612683 P3H3Q8IVL6 736 aa24.87■■□□□ 1.57
FDPS-221ENST00000612683 PPRC1Q5VV67 1664 aaKnown RBP24.85■■□□□ 1.57
FDPS-221ENST00000612683 KCNH8Q96L42 1107 aa24.84■■□□□ 1.57
FDPS-221ENST00000612683 KDM4FA0A1W2PPD8 638 aa24.82■■□□□ 1.56
FDPS-221ENST00000612683 WDR7Q9Y4E6 1490 aa24.81■■□□□ 1.56
FDPS-221ENST00000612683 ABCA8O94911 1581 aa24.8■■□□□ 1.56
FDPS-221ENST00000612683 MAP3K4Q9Y6R4 1608 aa24.79■■□□□ 1.56
FDPS-221ENST00000612683 TEX14Q8IWB6 1497 aa24.77■■□□□ 1.56
FDPS-221ENST00000612683 ARID3CA6NKF2 412 aa24.76■■□□□ 1.55
FDPS-221ENST00000612683 COL17A1Q9UMD9 1497 aaPredicted RBP24.76■■□□□ 1.55
FDPS-221ENST00000612683 RANGAP1P46060 587 aaPredicted RBP24.73■■□□□ 1.55
FDPS-221ENST00000612683 EEA1Q15075 1411 aa24.71■■□□□ 1.55
FDPS-221ENST00000612683 CD109Q6YHK3 1445 aa24.71■■□□□ 1.55
FDPS-221ENST00000612683 ATP10BO94823 1461 aa24.66■■□□□ 1.54
FDPS-221ENST00000612683 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.64■■□□□ 1.54
FDPS-221ENST00000612683 HNRNPUL2Q1KMD3 747 aaKnown RBP24.64■■□□□ 1.54
FDPS-221ENST00000612683 MAGI3Q5TCQ9 1506 aa24.63■■□□□ 1.53
FDPS-221ENST00000612683 CFAP43Q8NDM7 1665 aa24.62■■□□□ 1.53
FDPS-221ENST00000612683 SAMD9Q5K651 1589 aa24.61■■□□□ 1.53
FDPS-221ENST00000612683 ADGRL1O94910 1474 aa24.57■■□□□ 1.52
FDPS-221ENST00000612683 RAPGEF6Q8TEU7 1601 aa24.54■■□□□ 1.52
FDPS-221ENST00000612683 FHOD3Q2V2M9 1422 aa24.53■■□□□ 1.52
FDPS-221ENST00000612683 EHMT2Q96KQ7 1210 aa24.53■■□□□ 1.52
FDPS-221ENST00000612683 CHIC1Q5VXU3 224 aa24.49■■□□□ 1.51
FDPS-221ENST00000612683 PLEKHD1A6NEE1 506 aa24.48■■□□□ 1.51
FDPS-221ENST00000612683 UBTFP17480 764 aaKnown RBP24.48■■□□□ 1.51
FDPS-221ENST00000612683 KIF21BO75037 1637 aa24.46■■□□□ 1.51
FDPS-221ENST00000612683 NUP153P49790 1475 aaKnown RBP24.46■■□□□ 1.51
FDPS-221ENST00000612683 ABCA9Q8IUA7 1624 aa24.44■■□□□ 1.5
FDPS-221ENST00000612683 ARAP3Q8WWN8 1544 aa24.44■■□□□ 1.5
FDPS-221ENST00000612683 PHLDB1Q86UU1 1377 aa24.43■■□□□ 1.5
FDPS-221ENST00000612683 RAPGEF3O95398 923 aa24.4■■□□□ 1.5
FDPS-221ENST00000612683 EFCAB5A4FU69 1503 aa24.39■■□□□ 1.49
FDPS-221ENST00000612683 ATP1B4Q9UN42 357 aaPredicted RBP24.36■■□□□ 1.49
FDPS-221ENST00000612683 NEO1Q92859 1461 aa24.35■■□□□ 1.49
FDPS-221ENST00000612683 CDK13Q14004 1512 aaKnown RBP24.25■■□□□ 1.47
FDPS-221ENST00000612683 ARID4BQ4LE39 1312 aaPredicted RBP24.24■■□□□ 1.47
FDPS-221ENST00000612683 FMN1Q68DA7 1419 aa24.24■■□□□ 1.47
FDPS-221ENST00000612683 AKNAQ7Z591 1439 aa24.24■■□□□ 1.47
FDPS-221ENST00000612683 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.24■■□□□ 1.476e-8■■■■□ 20.3
FDPS-221ENST00000612683 FANCAO15360 1455 aa24.22■■□□□ 1.47
FDPS-221ENST00000612683 ARHGAP35Q9NRY4 1499 aa24.22■■□□□ 1.47
FDPS-221ENST00000612683 DENND4BO75064 1496 aaPredicted RBP24.21■■□□□ 1.47
FDPS-221ENST00000612683 CDK11AQ9UQ88 783 aaPredicted RBP24.21■■□□□ 1.47
FDPS-221ENST00000612683 HECW2Q9P2P5 1572 aa24.19■■□□□ 1.46
FDPS-221ENST00000612683 FRMPD1Q5SYB0 1578 aa24.18■■□□□ 1.46
FDPS-221ENST00000612683 TTC37Q6PGP7 1564 aa24.17■■□□□ 1.46
FDPS-221ENST00000612683 CFAP74Q9C0B2 1584 aa24.15■■□□□ 1.46
FDPS-221ENST00000612683 HECW1Q76N89 1606 aa24.14■■□□□ 1.46
FDPS-221ENST00000612683 PLCH2O75038 1416 aa24.13■■□□□ 1.45
FDPS-221ENST00000612683 RICTORQ6R327 1708 aa24.11■■□□□ 1.45
FDPS-221ENST00000612683 EFCAB2Q5VUJ9 269 aa24.11■■□□□ 1.45
FDPS-221ENST00000612683 ADAMTSL3P82987 1691 aa24.11■■□□□ 1.45
FDPS-221ENST00000612683 PTPRMP28827 1452 aa24.1■■□□□ 1.45
FDPS-221ENST00000612683 SCAPERQ9BY12 1400 aa24.1■■□□□ 1.45
FDPS-221ENST00000612683 BCORL1Q5H9F3 1711 aa24.07■■□□□ 1.44
FDPS-221ENST00000612683 ARHGEF40Q8TER5 1519 aa24.05■■□□□ 1.44
FDPS-221ENST00000612683 TROQ12816 1431 aaPredicted RBP24.04■■□□□ 1.44
FDPS-221ENST00000612683 ILDR1Q86SU0 546 aaPredicted RBP24.04■■□□□ 1.44
FDPS-221ENST00000612683 CLIP1P30622 1438 aa24.03■■□□□ 1.44
FDPS-221ENST00000612683 YEATS2Q9ULM3 1422 aa24.03■■□□□ 1.44
FDPS-221ENST00000612683 MAGI2Q86UL8 1455 aa24.01■■□□□ 1.43
FDPS-221ENST00000612683 ZMYM4Q5VZL5 1548 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms