RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-223ENST00000612130 CFAP43Q8NDM7 1665 aa19.57■□□□□ 0.72
UBE2F-223ENST00000612130 ITGAEP38570 1179 aa19.55■□□□□ 0.72
UBE2F-223ENST00000612130 PRDM2Q13029 1718 aa19.54■□□□□ 0.72
UBE2F-223ENST00000612130 PPP1R15AO75807 674 aaPredicted RBP19.51■□□□□ 0.71
UBE2F-223ENST00000612130 FHAD1B1AJZ9 1412 aa19.5■□□□□ 0.71
UBE2F-223ENST00000612130 PHLDB1Q86UU1 1377 aa19.5■□□□□ 0.71
UBE2F-223ENST00000612130 CCER2I3L3R5 266 aa19.5■□□□□ 0.71
UBE2F-223ENST00000612130 FKBP8Q14318 412 aa19.49■□□□□ 0.71
UBE2F-223ENST00000612130 IGF1RP08069 1367 aa19.48■□□□□ 0.71
UBE2F-223ENST00000612130 DDX10Q13206 875 aaKnown RBP19.48■□□□□ 0.71
UBE2F-223ENST00000612130 NEFLP07196 543 aa19.46■□□□□ 0.71
UBE2F-223ENST00000612130 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.45■□□□□ 0.7
UBE2F-223ENST00000612130 PCF11O94913 1555 aaKnown RBP19.44■□□□□ 0.7
UBE2F-223ENST00000612130 BCANQ96GW7 911 aa19.44■□□□□ 0.7
UBE2F-223ENST00000612130 CARMIL1Q5VZK9 1371 aa19.42■□□□□ 0.7
UBE2F-223ENST00000612130 SIN3AQ96ST3 1273 aa19.41■□□□□ 0.7
UBE2F-223ENST00000612130 ANP32CO43423 234 aa19.39■□□□□ 0.69
UBE2F-223ENST00000612130 FYCO1Q9BQS8 1478 aa19.38■□□□□ 0.69
UBE2F-223ENST00000612130 FAM50AQ14320 339 aaKnown RBP19.37■□□□□ 0.69
UBE2F-223ENST00000612130 EFCAB5A4FU69 1503 aa19.35■□□□□ 0.69
UBE2F-223ENST00000612130 AQRO60306 1485 aaKnown RBP eCLIP19.35■□□□□ 0.693e-6■■■□□ 18.3
UBE2F-223ENST00000612130 RBM19Q9Y4C8 960 aaKnown RBP19.34■□□□□ 0.69
UBE2F-223ENST00000612130 FGD5Q6ZNL6 1462 aa19.34■□□□□ 0.69
UBE2F-223ENST00000612130 CASKIN1Q8WXD9 1431 aa19.31■□□□□ 0.68
UBE2F-223ENST00000612130 TONSLQ96HA7 1378 aa19.28■□□□□ 0.68
UBE2F-223ENST00000612130 TRIM52Q96A61 297 aa19.27■□□□□ 0.68
UBE2F-223ENST00000612130 BCL11AQ9H165 835 aa19.27■□□□□ 0.68
UBE2F-223ENST00000612130 CCDC18Q5T9S5 1454 aa19.26■□□□□ 0.67
UBE2F-223ENST00000612130 FGD6Q6ZV73 1430 aa19.26■□□□□ 0.67
UBE2F-223ENST00000612130 UACAQ9BZF9 1416 aa19.25■□□□□ 0.67
UBE2F-223ENST00000612130 HFM1A2PYH4 1435 aa19.25■□□□□ 0.67
UBE2F-223ENST00000612130 CADPSQ9ULU8 1353 aa19.24■□□□□ 0.67
UBE2F-223ENST00000612130 FHOD3Q2V2M9 1422 aa19.24■□□□□ 0.67
UBE2F-223ENST00000612130 PTPN23Q9H3S7 1636 aa19.23■□□□□ 0.67
UBE2F-223ENST00000612130 CC2D2AQ9P2K1 1620 aa19.21■□□□□ 0.67
UBE2F-223ENST00000612130 HIRIP3Q9BW71 556 aaPredicted RBP19.21■□□□□ 0.67
UBE2F-223ENST00000612130 CTTNBP2Q8WZ74 1663 aa19.2■□□□□ 0.66
UBE2F-223ENST00000612130 CUL7Q14999 1698 aa19.2■□□□□ 0.66
UBE2F-223ENST00000612130 FMN1Q68DA7 1419 aa19.19■□□□□ 0.66
UBE2F-223ENST00000612130 FANCIQ9NVI1 1328 aa19.17■□□□□ 0.66
UBE2F-223ENST00000612130 KDM5BQ9UGL1 1544 aa19.17■□□□□ 0.66
UBE2F-223ENST00000612130 SNAPC4Q5SXM2 1469 aa19.17■□□□□ 0.66
UBE2F-223ENST00000612130 ABCA10Q8WWZ4 1543 aa19.16■□□□□ 0.66
UBE2F-223ENST00000612130 ERICH6BQ5W0A0 696 aa19.13■□□□□ 0.65
UBE2F-223ENST00000612130 P3H3Q8IVL6 736 aa19.13■□□□□ 0.65
UBE2F-223ENST00000612130 ATP1B4Q9UN42 357 aaPredicted RBP19.13■□□□□ 0.65
UBE2F-223ENST00000612130 NAIPQ13075 1403 aa19.13■□□□□ 0.65
UBE2F-223ENST00000612130 DNMBPQ6XZF7 1577 aa19.13■□□□□ 0.65
UBE2F-223ENST00000612130 PTPRKQ15262 1439 aa19.12■□□□□ 0.65
UBE2F-223ENST00000612130 THOC2Q8NI27 1593 aaKnown RBP19.12■□□□□ 0.65
UBE2F-223ENST00000612130 MTUS2Q5JR59 1369 aa19.09■□□□□ 0.65
UBE2F-223ENST00000612130 MSH5O43196 834 aa19.09■□□□□ 0.65
UBE2F-223ENST00000612130 CDK11AQ9UQ88 783 aaPredicted RBP19.09■□□□□ 0.65
UBE2F-223ENST00000612130 MYOM3Q5VTT5 1437 aa19.09■□□□□ 0.65
UBE2F-223ENST00000612130 NCOA2Q15596 1464 aa19.09■□□□□ 0.65
UBE2F-223ENST00000612130 HNRNPUQ00839 825 aaKnown RBP eCLIP19.09■□□□□ 0.65
UBE2F-223ENST00000612130 FANCD2Q9BXW9 1451 aa19.08■□□□□ 0.64
UBE2F-223ENST00000612130 SAMD9Q5K651 1589 aa19.07■□□□□ 0.64
UBE2F-223ENST00000612130 EHBP1L1Q8N3D4 1523 aa19.07■□□□□ 0.64
UBE2F-223ENST00000612130 HECW1Q76N89 1606 aa19.07■□□□□ 0.64
UBE2F-223ENST00000612130 SUPT6HQ7KZ85 1726 aaKnown RBP19.07■□□□□ 0.64
UBE2F-223ENST00000612130 GCC2Q8IWJ2 1684 aa19.05■□□□□ 0.64
UBE2F-223ENST00000612130 POLA1P09884 1462 aaPredicted RBP19.04■□□□□ 0.64
UBE2F-223ENST00000612130 LRRIQ1Q96JM4 1722 aa19.03■□□□□ 0.64
UBE2F-223ENST00000612130 GRIN2BQ13224 1484 aa19.03■□□□□ 0.64
UBE2F-223ENST00000612130 RAD54L2Q9Y4B4 1467 aa19.02■□□□□ 0.64
UBE2F-223ENST00000612130 CNTLNQ9NXG0 1405 aa19.02■□□□□ 0.64
UBE2F-223ENST00000612130 TOPBP1Q92547 1522 aa19.02■□□□□ 0.63
UBE2F-223ENST00000612130 AKNAQ7Z591 1439 aa19.01■□□□□ 0.63
UBE2F-223ENST00000612130 KIF21AQ7Z4S6 1674 aa19.01■□□□□ 0.63
UBE2F-223ENST00000612130 WASHC2AQ641Q2 1341 aa19.01■□□□□ 0.63
UBE2F-223ENST00000612130 ARHGEF11O15085 1522 aa19.01■□□□□ 0.63
UBE2F-223ENST00000612130 UGGT2Q9NYU1 1516 aa19.01■□□□□ 0.63
UBE2F-223ENST00000612130 PPP4R2Q9NY27 417 aa18.99■□□□□ 0.63
UBE2F-223ENST00000612130 TCOF1Q13428 1488 aaKnown RBP18.99■□□□□ 0.63
UBE2F-223ENST00000612130 HSPA5P11021 654 aaKnown RBP18.97■□□□□ 0.63
UBE2F-223ENST00000612130 ERICH6Q7L0X2 663 aa18.97■□□□□ 0.63
UBE2F-223ENST00000612130 MYT1LQ9UL68 1186 aa18.97■□□□□ 0.63
UBE2F-223ENST00000612130 DENND4BO75064 1496 aaPredicted RBP18.95■□□□□ 0.62
UBE2F-223ENST00000612130 EIF4G2P78344 907 aaKnown RBP eCLIP18.94■□□□□ 0.62
UBE2F-223ENST00000612130 IRX6P78412 446 aaPredicted RBP18.94■□□□□ 0.62
UBE2F-223ENST00000612130 NCOA1Q15788 1441 aa18.93■□□□□ 0.62
UBE2F-223ENST00000612130 ABCA5Q8WWZ7 1642 aa18.91■□□□□ 0.62
UBE2F-223ENST00000612130 ZBED9Q6R2W3 1325 aa18.9■□□□□ 0.62
UBE2F-223ENST00000612130 CCDC7Q96M83 1385 aa18.88■□□□□ 0.61
UBE2F-223ENST00000612130 POLR1AO95602 1720 aaPredicted RBP18.87■□□□□ 0.61
UBE2F-223ENST00000612130 MAGI3Q5TCQ9 1506 aa18.87■□□□□ 0.61
UBE2F-223ENST00000612130 PRKRIP1Q9H875 184 aaPredicted RBP18.86■□□□□ 0.61
UBE2F-223ENST00000612130 KDM6BO15054 1643 aa18.84■□□□□ 0.61
UBE2F-223ENST00000612130 MIA2Q96PC5 1412 aa18.84■□□□□ 0.61
UBE2F-223ENST00000612130 CCDC184Q52MB2 194 aa18.82■□□□□ 0.6
UBE2F-223ENST00000612130 RRP7BPQ9NSQ0 103 aa18.82■□□□□ 0.6
UBE2F-223ENST00000612130 DNAJC5BQ9UF47 199 aa18.81■□□□□ 0.6
UBE2F-223ENST00000612130 RPRD2Q5VT52 1461 aaKnown RBP18.81■□□□□ 0.6
UBE2F-223ENST00000612130 MRS2Q9HD23 443 aa18.8■□□□□ 0.6
UBE2F-223ENST00000612130 TEX14Q8IWB6 1497 aa18.8■□□□□ 0.6
UBE2F-223ENST00000612130 L3MBTL2Q969R5 705 aa18.79■□□□□ 0.6
UBE2F-223ENST00000612130 MPHOSPH9Q99550 1183 aa18.79■□□□□ 0.6
UBE2F-223ENST00000612130 GAPVD1Q14C86 1478 aa18.79■□□□□ 0.6
UBE2F-223ENST00000612130 URB2Q14146 1524 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms