RNA–Protein interactions for RNA: ENST00000611575.4

CLK4-214, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-214ENST00000611575 WDR97A6NE52 1622 aa13.36□□□□□ -0.27
CLK4-214ENST00000611575 CLASP1Q7Z460 1538 aa13.36□□□□□ -0.27
CLK4-214ENST00000611575 RAD54L2Q9Y4B4 1467 aa13.35□□□□□ -0.27
CLK4-214ENST00000611575 SOGA1O94964 1423 aa13.31□□□□□ -0.28
CLK4-214ENST00000611575 TDRD9Q8NDG6 1382 aaKnown RBP13.31□□□□□ -0.28
CLK4-214ENST00000611575 SNAPC4Q5SXM2 1469 aa13.29□□□□□ -0.28
CLK4-214ENST00000611575 MAGI1Q96QZ7 1491 aaPredicted RBP13.29□□□□□ -0.28
CLK4-214ENST00000611575 FGD5Q6ZNL6 1462 aa13.29□□□□□ -0.28
CLK4-214ENST00000611575 DSG3P32926 999 aa13.28□□□□□ -0.28
CLK4-214ENST00000611575 CUX1P39880 1505 aa13.27□□□□□ -0.29
CLK4-214ENST00000611575 SYNJ2O15056 1496 aa13.25□□□□□ -0.29
CLK4-214ENST00000611575 GRIN2BQ13224 1484 aa13.25□□□□□ -0.29
CLK4-214ENST00000611575 SYNJ1O43426 1573 aa13.24□□□□□ -0.29
CLK4-214ENST00000611575 FBLN2P98095 1184 aa13.23□□□□□ -0.29
CLK4-214ENST00000611575 TRHP20396 242 aaPredicted RBP13.21□□□□□ -0.29
CLK4-214ENST00000611575 CHMP7Q8WUX9 453 aaPredicted RBP13.18□□□□□ -0.3
CLK4-214ENST00000611575 ABCA10Q8WWZ4 1543 aa13.18□□□□□ -0.3
CLK4-214ENST00000611575 ABCA5Q8WWZ7 1642 aa13.17□□□□□ -0.3
CLK4-214ENST00000611575 GAPVD1Q14C86 1478 aa13.16□□□□□ -0.3
CLK4-214ENST00000611575 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.15□□□□□ -0.3
CLK4-214ENST00000611575 HNRNPUL2Q1KMD3 747 aaKnown RBP13.15□□□□□ -0.3
CLK4-214ENST00000611575 MYCNP04198 464 aaPredicted RBP13.13□□□□□ -0.31
CLK4-214ENST00000611575 NUP160Q12769 1436 aa13.12□□□□□ -0.31
CLK4-214ENST00000611575 ABCB7O75027 752 aa13.11□□□□□ -0.31
CLK4-214ENST00000611575 APLP2Q06481 763 aa13.11□□□□□ -0.31
CLK4-214ENST00000611575 SAMD1Q6SPF0 538 aaPredicted RBP13.11□□□□□ -0.31
CLK4-214ENST00000611575 PBRM1Q86U86 1689 aa13.11□□□□□ -0.31
CLK4-214ENST00000611575 ZNF219Q9P2Y4 722 aaPredicted RBP13.09□□□□□ -0.31
CLK4-214ENST00000611575 GRIN2AQ12879 1464 aa13.09□□□□□ -0.31
CLK4-214ENST00000611575 ERCC6L2Q5T890 1561 aa13.08□□□□□ -0.32
CLK4-214ENST00000611575 SHROOM2Q13796 1616 aa13.06□□□□□ -0.32
CLK4-214ENST00000611575 ADAMTS12P58397 1594 aa13.06□□□□□ -0.32
CLK4-214ENST00000611575 CEP170Q5SW79 1584 aa13.05□□□□□ -0.32
CLK4-214ENST00000611575 ATXN8OSP0DMR3 200 aa13.04□□□□□ -0.32
CLK4-214ENST00000611575 WRNQ14191 1432 aaPredicted RBP eCLIP13.03□□□□□ -0.32
CLK4-214ENST00000611575 FHAD1B1AJZ9 1412 aa13.01□□□□□ -0.33
CLK4-214ENST00000611575 TOP2BQ02880 1626 aa12.99□□□□□ -0.33
CLK4-214ENST00000611575 BIVM-ERCC5R4GMW8 1640 aa12.99□□□□□ -0.33
CLK4-214ENST00000611575 ERICH3Q5RHP9 1530 aa12.99□□□□□ -0.33
CLK4-214ENST00000611575 PRG4Q92954 1404 aaPredicted RBP12.9□□□□□ -0.34
CLK4-214ENST00000611575 KIF13AQ9H1H9 1805 aa12.9□□□□□ -0.34
CLK4-214ENST00000611575 MAPKBP1O60336 1514 aa12.89□□□□□ -0.35
CLK4-214ENST00000611575 ABCC10Q5T3U5 1492 aa12.89□□□□□ -0.35
CLK4-214ENST00000611575 RUSC2Q8N2Y8 1516 aa12.88□□□□□ -0.35
CLK4-214ENST00000611575 JPH4Q96JJ6 628 aa12.88□□□□□ -0.35
CLK4-214ENST00000611575 ATF5Q9Y2D1 282 aaPredicted RBP12.88□□□□□ -0.35
CLK4-214ENST00000611575 POLA2Q14181 598 aa12.84□□□□□ -0.35
CLK4-214ENST00000611575 DIP2BQ9P265 1576 aa12.83□□□□□ -0.36
CLK4-214ENST00000611575 ADCY10Q96PN6 1610 aa12.82□□□□□ -0.36
CLK4-214ENST00000611575 KIAA0586Q9BVV6 1533 aa12.8□□□□□ -0.36
CLK4-214ENST00000611575 IGF1RP08069 1367 aa12.79□□□□□ -0.36
CLK4-214ENST00000611575 SUPT5HO00267 1087 aaKnown RBP12.77□□□□□ -0.37
CLK4-214ENST00000611575 FAM69CQ0P6D2 419 aa12.77□□□□□ -0.37
CLK4-214ENST00000611575 KDM4FA0A1W2PPD8 638 aa12.74□□□□□ -0.37
CLK4-214ENST00000611575 CUL7Q14999 1698 aa12.7□□□□□ -0.38
CLK4-214ENST00000611575 NPM1P06748 294 aaKnown RBP eCLIP12.7□□□□□ -0.38
CLK4-214ENST00000611575 KIF27Q86VH2 1401 aa12.7□□□□□ -0.38
CLK4-214ENST00000611575 KDM6BO15054 1643 aa12.7□□□□□ -0.38
CLK4-214ENST00000611575 GLI2P10070 1586 aa12.68□□□□□ -0.38
CLK4-214ENST00000611575 ABCC2Q92887 1545 aa12.67□□□□□ -0.38
CLK4-214ENST00000611575 UHRF1BP1LA0JNW5 1464 aa12.67□□□□□ -0.38
CLK4-214ENST00000611575 PTPRGP23470 1445 aa12.66□□□□□ -0.38
CLK4-214ENST00000611575 TNIKQ9UKE5 1360 aa12.65□□□□□ -0.38
CLK4-214ENST00000611575 PPRC1Q5VV67 1664 aaKnown RBP12.64□□□□□ -0.39
CLK4-214ENST00000611575 PLB1Q6P1J6 1458 aa12.64□□□□□ -0.39
CLK4-214ENST00000611575 ASXL2Q76L83 1435 aa12.63□□□□□ -0.39
CLK4-214ENST00000611575 CARMIL1Q5VZK9 1371 aa12.63□□□□□ -0.39
CLK4-214ENST00000611575 DISP1Q96F81 1524 aa12.62□□□□□ -0.39
CLK4-214ENST00000611575 COL17A1Q9UMD9 1497 aaPredicted RBP12.62□□□□□ -0.39
CLK4-214ENST00000611575 KDM5BQ9UGL1 1544 aa12.61□□□□□ -0.39
CLK4-214ENST00000611575 CARMIL2Q6F5E8 1435 aa12.6□□□□□ -0.39
CLK4-214ENST00000611575 UACAQ9BZF9 1416 aa12.6□□□□□ -0.39
CLK4-214ENST00000611575 IQGAP2Q13576 1575 aa12.6□□□□□ -0.39
CLK4-214ENST00000611575 EPRSP07814 1512 aaKnown RBP12.58□□□□□ -0.4
CLK4-214ENST00000611575 UGGT2Q9NYU1 1516 aa12.58□□□□□ -0.4
CLK4-214ENST00000611575 POTEHQ6S545 545 aa12.58□□□□□ -0.4
CLK4-214ENST00000611575 RBM42Q9BTD8 480 aaKnown RBP12.58□□□□□ -0.4
CLK4-214ENST00000611575 MAP3K4Q9Y6R4 1608 aa12.56□□□□□ -0.4
CLK4-214ENST00000611575 ADGRL1O94910 1474 aa12.55□□□□□ -0.4
CLK4-214ENST00000611575 TSPOAP1O95153 1857 aa12.54□□□□□ -0.4
CLK4-214ENST00000611575 FKBP8Q14318 412 aa12.53□□□□□ -0.4
CLK4-214ENST00000611575 TEX14Q8IWB6 1497 aa12.51□□□□□ -0.41
CLK4-214ENST00000611575 KIAA0556O60303 1618 aa12.51□□□□□ -0.41
CLK4-214ENST00000611575 ILDR1Q86SU0 546 aaPredicted RBP12.5□□□□□ -0.41
CLK4-214ENST00000611575 RAPGEF2Q9Y4G8 1499 aa12.5□□□□□ -0.41
CLK4-214ENST00000611575 ZCCHC11Q5TAX3 1644 aaKnown RBP12.49□□□□□ -0.41
CLK4-214ENST00000611575 ZBTB12Q9Y330 459 aaPredicted RBP12.49□□□□□ -0.41
CLK4-214ENST00000611575 WDR7Q9Y4E6 1490 aa12.48□□□□□ -0.41
CLK4-214ENST00000611575 MAGI3Q5TCQ9 1506 aa12.47□□□□□ -0.41
CLK4-214ENST00000611575 ABCA8O94911 1581 aa12.44□□□□□ -0.42
CLK4-214ENST00000611575 HECW2Q9P2P5 1572 aa12.44□□□□□ -0.42
CLK4-214ENST00000611575 TTBK1Q5TCY1 1321 aaPredicted RBP12.41□□□□□ -0.42
CLK4-214ENST00000611575 PRXQ9BXM0 1461 aa12.4□□□□□ -0.42
CLK4-214ENST00000611575 CFAP43Q8NDM7 1665 aa12.39□□□□□ -0.43
CLK4-214ENST00000611575 CD109Q6YHK3 1445 aa12.39□□□□□ -0.43
CLK4-214ENST00000611575 ARAP3Q8WWN8 1544 aa12.38□□□□□ -0.43
CLK4-214ENST00000611575 GOLGA3Q08378 1498 aa12.38□□□□□ -0.43
CLK4-214ENST00000611575 AKT1S1Q96B36 256 aa12.35□□□□□ -0.43
CLK4-214ENST00000611575 CHRDL2Q6WN34 429 aa12.34□□□□□ -0.43
CLK4-214ENST00000611575 CTTNBP2Q8WZ74 1663 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms