RNA–Protein interactions for RNA: ENST00000610481.1

MALAT1-204, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 353 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-204ENST00000610481 SHROOM2Q13796 1616 aa18.61■□□□□ 0.57
MALAT1-204ENST00000610481 PRG4Q92954 1404 aaPredicted RBP18.61■□□□□ 0.57
MALAT1-204ENST00000610481 KIAA0586Q9BVV6 1533 aa18.59■□□□□ 0.57
MALAT1-204ENST00000610481 TRHP20396 242 aaPredicted RBP18.53■□□□□ 0.56
MALAT1-204ENST00000610481 RAPGEF2Q9Y4G8 1499 aa18.52■□□□□ 0.55
MALAT1-204ENST00000610481 PRXQ9BXM0 1461 aa18.42■□□□□ 0.54
MALAT1-204ENST00000610481 IQGAP2Q13576 1575 aa18.42■□□□□ 0.54
MALAT1-204ENST00000610481 CSRNP3Q8WYN3 585 aa18.39■□□□□ 0.53
MALAT1-204ENST00000610481 TTBK1Q5TCY1 1321 aaPredicted RBP18.39■□□□□ 0.53
MALAT1-204ENST00000610481 CARMIL2Q6F5E8 1435 aa18.39■□□□□ 0.53
MALAT1-204ENST00000610481 PTPRGP23470 1445 aa18.38■□□□□ 0.53
MALAT1-204ENST00000610481 CHIC1Q5VXU3 224 aa18.37■□□□□ 0.53
MALAT1-204ENST00000610481 TNIKQ9UKE5 1360 aa18.36■□□□□ 0.53
MALAT1-204ENST00000610481 DISP1Q96F81 1524 aa18.34■□□□□ 0.53
MALAT1-204ENST00000610481 FAM9AQ8IZU1 332 aaPredicted RBP18.34■□□□□ 0.53
MALAT1-204ENST00000610481 NPM1P06748 294 aaKnown RBP eCLIP18.33■□□□□ 0.52
MALAT1-204ENST00000610481 UGGT2Q9NYU1 1516 aa18.33■□□□□ 0.52
MALAT1-204ENST00000610481 EEA1Q15075 1411 aa18.32■□□□□ 0.52
MALAT1-204ENST00000610481 ADCY10Q96PN6 1610 aa18.29■□□□□ 0.52
MALAT1-204ENST00000610481 KIAA0556O60303 1618 aa18.25■□□□□ 0.51
MALAT1-204ENST00000610481 UACAQ9BZF9 1416 aa18.23■□□□□ 0.51
MALAT1-204ENST00000610481 CTTNBP2Q8WZ74 1663 aa18.22■□□□□ 0.51
MALAT1-204ENST00000610481 GOLGA3Q08378 1498 aa18.21■□□□□ 0.51
MALAT1-204ENST00000610481 MAPKBP1O60336 1514 aa18.21■□□□□ 0.51
MALAT1-204ENST00000610481 ABCC2Q92887 1545 aa18.2■□□□□ 0.5
MALAT1-204ENST00000610481 FAM69CQ0P6D2 419 aa18.2■□□□□ 0.5
MALAT1-204ENST00000610481 UHRF1BP1LA0JNW5 1464 aa18.2■□□□□ 0.5
MALAT1-204ENST00000610481 ABCC10Q5T3U5 1492 aa18.19■□□□□ 0.5
MALAT1-204ENST00000610481 P3H3Q8IVL6 736 aa18.17■□□□□ 0.5
MALAT1-204ENST00000610481 PLB1Q6P1J6 1458 aa18.14■□□□□ 0.5
MALAT1-204ENST00000610481 RANGAP1P46060 587 aaPredicted RBP18.14■□□□□ 0.49
MALAT1-204ENST00000610481 EHMT2Q96KQ7 1210 aa18.14■□□□□ 0.49
MALAT1-204ENST00000610481 ASXL2Q76L83 1435 aa18.12■□□□□ 0.49
MALAT1-204ENST00000610481 KDM5BQ9UGL1 1544 aa18.12■□□□□ 0.49
MALAT1-204ENST00000610481 KIF21BO75037 1637 aa18.12■□□□□ 0.49
MALAT1-204ENST00000610481 DIP2BQ9P265 1576 aa18.11■□□□□ 0.49
MALAT1-204ENST00000610481 KIF13AQ9H1H9 1805 aa18.08■□□□□ 0.48
MALAT1-204ENST00000610481 UBTFP17480 764 aaKnown RBP18.07■□□□□ 0.48
MALAT1-204ENST00000610481 ABCA8O94911 1581 aa18.07■□□□□ 0.48
MALAT1-204ENST00000610481 SAMD9Q5K651 1589 aa18.05■□□□□ 0.48
MALAT1-204ENST00000610481 ARID3CA6NKF2 412 aa18.03■□□□□ 0.48
MALAT1-204ENST00000610481 FHOD3Q2V2M9 1422 aa18.03■□□□□ 0.48
MALAT1-204ENST00000610481 ZCCHC11Q5TAX3 1644 aaKnown RBP18.02■□□□□ 0.48
MALAT1-204ENST00000610481 EPRSP07814 1512 aaKnown RBP18.01■□□□□ 0.47
MALAT1-204ENST00000610481 WDR7Q9Y4E6 1490 aa17.99■□□□□ 0.47
MALAT1-204ENST00000610481 GLI2P10070 1586 aa17.98■□□□□ 0.47
MALAT1-204ENST00000610481 KCNH8Q96L42 1107 aa17.96■□□□□ 0.47
MALAT1-204ENST00000610481 EFCAB5A4FU69 1503 aa17.96■□□□□ 0.47
MALAT1-204ENST00000610481 ATP10BO94823 1461 aa17.95■□□□□ 0.46
MALAT1-204ENST00000610481 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.92■□□□□ 0.46
MALAT1-204ENST00000610481 HNRNPUL2Q1KMD3 747 aaKnown RBP17.92■□□□□ 0.46
MALAT1-204ENST00000610481 RAPGEF6Q8TEU7 1601 aa17.91■□□□□ 0.46
MALAT1-204ENST00000610481 NUP153P49790 1475 aaKnown RBP17.91■□□□□ 0.46
MALAT1-204ENST00000610481 ARHGAP35Q9NRY4 1499 aa17.89■□□□□ 0.45
MALAT1-204ENST00000610481 TSPOAP1O95153 1857 aa17.88■□□□□ 0.45
MALAT1-204ENST00000610481 CD109Q6YHK3 1445 aa17.86■□□□□ 0.45
MALAT1-204ENST00000610481 KDM6BO15054 1643 aa17.86■□□□□ 0.45
MALAT1-204ENST00000610481 MAP3K4Q9Y6R4 1608 aa17.86■□□□□ 0.45
MALAT1-204ENST00000610481 PPRC1Q5VV67 1664 aaKnown RBP17.85■□□□□ 0.45
MALAT1-204ENST00000610481 TEX14Q8IWB6 1497 aa17.84■□□□□ 0.45
MALAT1-204ENST00000610481 FMN1Q68DA7 1419 aa17.83■□□□□ 0.45
MALAT1-204ENST00000610481 ATP1B4Q9UN42 357 aaPredicted RBP17.82■□□□□ 0.44
MALAT1-204ENST00000610481 PLEKHD1A6NEE1 506 aa17.81■□□□□ 0.44
MALAT1-204ENST00000610481 COL17A1Q9UMD9 1497 aaPredicted RBP17.81■□□□□ 0.44
MALAT1-204ENST00000610481 MAGI3Q5TCQ9 1506 aa17.8■□□□□ 0.44
MALAT1-204ENST00000610481 CDK13Q14004 1512 aaKnown RBP17.77■□□□□ 0.43
MALAT1-204ENST00000610481 CFAP43Q8NDM7 1665 aa17.76■□□□□ 0.43
MALAT1-204ENST00000610481 CLIP1P30622 1438 aa17.74■□□□□ 0.43
MALAT1-204ENST00000610481 ABCA9Q8IUA7 1624 aa17.72■□□□□ 0.43
MALAT1-204ENST00000610481 HECW1Q76N89 1606 aa17.72■□□□□ 0.43
MALAT1-204ENST00000610481 AEBP2Q6ZN18 517 aaPredicted RBP17.71■□□□□ 0.43
MALAT1-204ENST00000610481 CASKIN1Q8WXD9 1431 aa17.68■□□□□ 0.42
MALAT1-204ENST00000610481 CDK11AQ9UQ88 783 aaPredicted RBP17.68■□□□□ 0.42
MALAT1-204ENST00000610481 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.66■□□□□ 0.42
MALAT1-204ENST00000610481 PHLDB1Q86UU1 1377 aa17.66■□□□□ 0.42
MALAT1-204ENST00000610481 ARAP3Q8WWN8 1544 aa17.65■□□□□ 0.42
MALAT1-204ENST00000610481 NEO1Q92859 1461 aa17.64■□□□□ 0.41
MALAT1-204ENST00000610481 LOC105371045A0A1W2PR82 267 aa17.64■□□□□ 0.41
MALAT1-204ENST00000610481 PCF11O94913 1555 aaKnown RBP17.64■□□□□ 0.41
MALAT1-204ENST00000610481 CEP162Q5TB80 1403 aa17.63■□□□□ 0.41
MALAT1-204ENST00000610481 KDM4FA0A1W2PPD8 638 aa17.62■□□□□ 0.41
MALAT1-204ENST00000610481 RAPGEF3O95398 923 aa17.62■□□□□ 0.41
MALAT1-204ENST00000610481 TROQ12816 1431 aaPredicted RBP17.62■□□□□ 0.41
MALAT1-204ENST00000610481 TTC37Q6PGP7 1564 aa17.62■□□□□ 0.41
MALAT1-204ENST00000610481 FYCO1Q9BQS8 1478 aa17.61■□□□□ 0.41
MALAT1-204ENST00000610481 FANCAO15360 1455 aa17.6■□□□□ 0.41
MALAT1-204ENST00000610481 CCDC18Q5T9S5 1454 aa17.6■□□□□ 0.41
MALAT1-204ENST00000610481 PLCH2O75038 1416 aa17.58■□□□□ 0.41
MALAT1-204ENST00000610481 AKNAQ7Z591 1439 aa17.58■□□□□ 0.41
MALAT1-204ENST00000610481 KIF14Q15058 1648 aa17.55■□□□□ 0.4
MALAT1-204ENST00000610481 LRRIQ1Q96JM4 1722 aa17.55■□□□□ 0.4
MALAT1-204ENST00000610481 DENND4BO75064 1496 aaPredicted RBP17.54■□□□□ 0.4
MALAT1-204ENST00000610481 EFCAB2Q5VUJ9 269 aa17.53■□□□□ 0.4
MALAT1-204ENST00000610481 ADGRL1O94910 1474 aa17.52■□□□□ 0.4
MALAT1-204ENST00000610481 FRMPD1Q5SYB0 1578 aa17.51■□□□□ 0.39
MALAT1-204ENST00000610481 CFAP74Q9C0B2 1584 aa17.5■□□□□ 0.39
MALAT1-204ENST00000610481 SCAPERQ9BY12 1400 aa17.5■□□□□ 0.39
MALAT1-204ENST00000610481 ARHGAP5Q13017 1502 aa17.47■□□□□ 0.39
MALAT1-204ENST00000610481 POGZQ7Z3K3 1410 aa17.46■□□□□ 0.39
MALAT1-204ENST00000610481 MTUS2Q5JR59 1369 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms