RNA–Protein interactions for RNA: ENST00000610468.4

MUC1-222, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-222ENST00000610468 KIF27Q86VH2 1401 aa24.48■■□□□ 1.51
MUC1-222ENST00000610468 KIAA0586Q9BVV6 1533 aa24.43■■□□□ 1.5
MUC1-222ENST00000610468 CUL7Q14999 1698 aa24.4■■□□□ 1.5
MUC1-222ENST00000610468 MAPKBP1O60336 1514 aa24.32■■□□□ 1.48
MUC1-222ENST00000610468 CARMIL1Q5VZK9 1371 aa24.3■■□□□ 1.48
MUC1-222ENST00000610468 ADCY10Q96PN6 1610 aa24.29■■□□□ 1.48
MUC1-222ENST00000610468 KIF13AQ9H1H9 1805 aa24.29■■□□□ 1.48
MUC1-222ENST00000610468 ABCC10Q5T3U5 1492 aa24.29■■□□□ 1.48
MUC1-222ENST00000610468 NPM1P06748 294 aaKnown RBP eCLIP24.25■■□□□ 1.47
MUC1-222ENST00000610468 FAM69CQ0P6D2 419 aa24.21■■□□□ 1.47
MUC1-222ENST00000610468 DIP2BQ9P265 1576 aa24.2■■□□□ 1.47
MUC1-222ENST00000610468 AEBP2Q6ZN18 517 aaPredicted RBP24.2■■□□□ 1.46
MUC1-222ENST00000610468 PTPRGP23470 1445 aa24.18■■□□□ 1.46
MUC1-222ENST00000610468 CARMIL2Q6F5E8 1435 aa24.16■■□□□ 1.46
MUC1-222ENST00000610468 IQGAP2Q13576 1575 aa24.15■■□□□ 1.46
MUC1-222ENST00000610468 TNIKQ9UKE5 1360 aa24.15■■□□□ 1.46
MUC1-222ENST00000610468 ABCC2Q92887 1545 aa24.1■■□□□ 1.45
MUC1-222ENST00000610468 RAPGEF2Q9Y4G8 1499 aa24.08■■□□□ 1.45
MUC1-222ENST00000610468 DISP1Q96F81 1524 aa24.08■■□□□ 1.45
MUC1-222ENST00000610468 UHRF1BP1LA0JNW5 1464 aa24.07■■□□□ 1.44
MUC1-222ENST00000610468 UGGT2Q9NYU1 1516 aa24.04■■□□□ 1.44
MUC1-222ENST00000610468 UACAQ9BZF9 1416 aa24.01■■□□□ 1.43
MUC1-222ENST00000610468 ASXL2Q76L83 1435 aa24■■□□□ 1.43
MUC1-222ENST00000610468 TTBK1Q5TCY1 1321 aaPredicted RBP23.99■■□□□ 1.43
MUC1-222ENST00000610468 PLB1Q6P1J6 1458 aa23.99■■□□□ 1.43
MUC1-222ENST00000610468 KDM6BO15054 1643 aa23.96■■□□□ 1.43
MUC1-222ENST00000610468 GLI2P10070 1586 aa23.95■■□□□ 1.43
MUC1-222ENST00000610468 KDM5BQ9UGL1 1544 aa23.94■■□□□ 1.42
MUC1-222ENST00000610468 KIAA0556O60303 1618 aa23.93■■□□□ 1.42
MUC1-222ENST00000610468 TSPOAP1O95153 1857 aa23.87■■□□□ 1.41
MUC1-222ENST00000610468 PRXQ9BXM0 1461 aa23.86■■□□□ 1.41
MUC1-222ENST00000610468 EPRSP07814 1512 aaKnown RBP23.85■■□□□ 1.41
MUC1-222ENST00000610468 PPRC1Q5VV67 1664 aaKnown RBP23.84■■□□□ 1.41
MUC1-222ENST00000610468 GOLGA3Q08378 1498 aa23.81■■□□□ 1.4
MUC1-222ENST00000610468 ZCCHC11Q5TAX3 1644 aaKnown RBP23.81■■□□□ 1.4
MUC1-222ENST00000610468 CTTNBP2Q8WZ74 1663 aa23.79■■□□□ 1.4
MUC1-222ENST00000610468 KDM4FA0A1W2PPD8 638 aa23.79■■□□□ 1.4
MUC1-222ENST00000610468 MAP3K4Q9Y6R4 1608 aa23.78■■□□□ 1.4
MUC1-222ENST00000610468 WDR7Q9Y4E6 1490 aa23.76■■□□□ 1.39
MUC1-222ENST00000610468 COL17A1Q9UMD9 1497 aaPredicted RBP23.75■■□□□ 1.39
MUC1-222ENST00000610468 TEX14Q8IWB6 1497 aa23.74■■□□□ 1.39
MUC1-222ENST00000610468 ABCA8O94911 1581 aa23.74■■□□□ 1.39
MUC1-222ENST00000610468 MAGI3Q5TCQ9 1506 aa23.63■■□□□ 1.37
MUC1-222ENST00000610468 CD109Q6YHK3 1445 aa23.6■■□□□ 1.37
MUC1-222ENST00000610468 CSRNP3Q8WYN3 585 aa23.6■■□□□ 1.37
MUC1-222ENST00000610468 ADGRL1O94910 1474 aa23.59■■□□□ 1.37
MUC1-222ENST00000610468 CFAP43Q8NDM7 1665 aa23.57■■□□□ 1.36
MUC1-222ENST00000610468 SAMD9Q5K651 1589 aa23.55■■□□□ 1.36
MUC1-222ENST00000610468 EEA1Q15075 1411 aa23.54■■□□□ 1.36
MUC1-222ENST00000610468 KCNH8Q96L42 1107 aa23.54■■□□□ 1.36
MUC1-222ENST00000610468 ATP10BO94823 1461 aa23.54■■□□□ 1.36
MUC1-222ENST00000610468 P3H3Q8IVL6 736 aa23.51■■□□□ 1.35
MUC1-222ENST00000610468 FAM9AQ8IZU1 332 aaPredicted RBP23.51■■□□□ 1.35
MUC1-222ENST00000610468 ARAP3Q8WWN8 1544 aa23.44■■□□□ 1.34
MUC1-222ENST00000610468 ARID3CA6NKF2 412 aa23.44■■□□□ 1.34
MUC1-222ENST00000610468 RAPGEF6Q8TEU7 1601 aa23.42■■□□□ 1.34
MUC1-222ENST00000610468 ABCA9Q8IUA7 1624 aa23.41■■□□□ 1.34
MUC1-222ENST00000610468 NUP153P49790 1475 aaKnown RBP23.4■■□□□ 1.34
MUC1-222ENST00000610468 PHLDB1Q86UU1 1377 aa23.4■■□□□ 1.34
MUC1-222ENST00000610468 FHOD3Q2V2M9 1422 aa23.36■■□□□ 1.33
MUC1-222ENST00000610468 NEO1Q92859 1461 aa23.33■■□□□ 1.33
MUC1-222ENST00000610468 KIF21BO75037 1637 aa23.33■■□□□ 1.32
MUC1-222ENST00000610468 EFCAB5A4FU69 1503 aa23.31■■□□□ 1.32
MUC1-222ENST00000610468 RANGAP1P46060 587 aaPredicted RBP23.28■■□□□ 1.32
MUC1-222ENST00000610468 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.27■■□□□ 1.32
MUC1-222ENST00000610468 HNRNPUL2Q1KMD3 747 aaKnown RBP23.27■■□□□ 1.32
MUC1-222ENST00000610468 HECW2Q9P2P5 1572 aa23.27■■□□□ 1.32
MUC1-222ENST00000610468 RAPGEF3O95398 923 aa23.24■■□□□ 1.31
MUC1-222ENST00000610468 FRMPD1Q5SYB0 1578 aa23.23■■□□□ 1.31
MUC1-222ENST00000610468 PLEKHD1A6NEE1 506 aa23.22■■□□□ 1.31
MUC1-222ENST00000610468 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.17■■□□□ 1.3
MUC1-222ENST00000610468 ADAMTSL3P82987 1691 aa23.14■■□□□ 1.29
MUC1-222ENST00000610468 FANCAO15360 1455 aa23.14■■□□□ 1.29
MUC1-222ENST00000610468 DENND4BO75064 1496 aaPredicted RBP23.14■■□□□ 1.29
MUC1-222ENST00000610468 AKNAQ7Z591 1439 aa23.14■■□□□ 1.29
MUC1-222ENST00000610468 CDK13Q14004 1512 aaKnown RBP23.13■■□□□ 1.29
MUC1-222ENST00000610468 TTC37Q6PGP7 1564 aa23.12■■□□□ 1.29
MUC1-222ENST00000610468 ARHGEF40Q8TER5 1519 aa23.12■■□□□ 1.29
MUC1-222ENST00000610468 PTPRMP28827 1452 aa23.11■■□□□ 1.29
MUC1-222ENST00000610468 CFAP74Q9C0B2 1584 aa23.1■■□□□ 1.29
MUC1-222ENST00000610468 FMN1Q68DA7 1419 aa23.1■■□□□ 1.29
MUC1-222ENST00000610468 CHIC1Q5VXU3 224 aa23.1■■□□□ 1.29
MUC1-222ENST00000610468 ARHGAP35Q9NRY4 1499 aa23.09■■□□□ 1.29
MUC1-222ENST00000610468 RICTORQ6R327 1708 aa23.08■■□□□ 1.29
MUC1-222ENST00000610468 UBTFP17480 764 aaKnown RBP23.08■■□□□ 1.29
MUC1-222ENST00000610468 ILDR1Q86SU0 546 aaPredicted RBP23.08■■□□□ 1.29
MUC1-222ENST00000610468 ZMYM4Q5VZL5 1548 aa23.08■■□□□ 1.28
MUC1-222ENST00000610468 BCORL1Q5H9F3 1711 aa23.06■■□□□ 1.28
MUC1-222ENST00000610468 PLCH2O75038 1416 aa23.05■■□□□ 1.28
MUC1-222ENST00000610468 HECW1Q76N89 1606 aa23.04■■□□□ 1.28
MUC1-222ENST00000610468 MAGI2Q86UL8 1455 aa23.02■■□□□ 1.28
MUC1-222ENST00000610468 ARID4BQ4LE39 1312 aaPredicted RBP23.02■■□□□ 1.28
MUC1-222ENST00000610468 MADDQ8WXG6 1647 aa23■■□□□ 1.27
MUC1-222ENST00000610468 POGZQ7Z3K3 1410 aa23■■□□□ 1.27
MUC1-222ENST00000610468 ZFYVE16Q7Z3T8 1539 aa22.99■■□□□ 1.27
MUC1-222ENST00000610468 EHMT2Q96KQ7 1210 aa22.99■■□□□ 1.27
MUC1-222ENST00000610468 YEATS2Q9ULM3 1422 aa22.99■■□□□ 1.27
MUC1-222ENST00000610468 CDK11AQ9UQ88 783 aaPredicted RBP22.97■■□□□ 1.27
MUC1-222ENST00000610468 SCAPERQ9BY12 1400 aa22.97■■□□□ 1.27
MUC1-222ENST00000610468 TROQ12816 1431 aaPredicted RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 257.7 ms