RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 SYNJ1O43426 1573 aa8.45□□□□□ -1.06
SSX9-202ENST00000608568 C1QBPQ07021 282 aaKnown RBP8.44□□□□□ -1.06
SSX9-202ENST00000608568 RTN4Q9NQC3 1192 aaKnown RBP8.44□□□□□ -1.06
SSX9-202ENST00000608568 ARAP1Q96P48 1450 aa8.43□□□□□ -1.06
SSX9-202ENST00000608568 TOP2BQ02880 1626 aa8.41□□□□□ -1.06
SSX9-202ENST00000608568 ADAMTS12P58397 1594 aa8.41□□□□□ -1.06
SSX9-202ENST00000608568 OSCARQ8IYS5 282 aa8.41□□□□□ -1.06
SSX9-202ENST00000608568 CNKSR2Q8WXI2 1034 aa8.41□□□□□ -1.06
SSX9-202ENST00000608568 SOGA1O94964 1423 aa8.4□□□□□ -1.06
SSX9-202ENST00000608568 TDRD9Q8NDG6 1382 aaKnown RBP8.4□□□□□ -1.06
SSX9-202ENST00000608568 HOXD11P31277 338 aaPredicted RBP8.39□□□□□ -1.07
SSX9-202ENST00000608568 MAGI1Q96QZ7 1491 aaPredicted RBP8.38□□□□□ -1.07
SSX9-202ENST00000608568 ERCC6L2Q5T890 1561 aa8.38□□□□□ -1.07
SSX9-202ENST00000608568 ABCA10Q8WWZ4 1543 aa8.38□□□□□ -1.07
SSX9-202ENST00000608568 GRIN2BQ13224 1484 aa8.37□□□□□ -1.07
SSX9-202ENST00000608568 CEP170Q5SW79 1584 aa8.36□□□□□ -1.07
SSX9-202ENST00000608568 GAPVD1Q14C86 1478 aa8.35□□□□□ -1.07
SSX9-202ENST00000608568 SUPT5HO00267 1087 aaKnown RBP8.35□□□□□ -1.07
SSX9-202ENST00000608568 HRCP23327 699 aa8.35□□□□□ -1.07
SSX9-202ENST00000608568 FOXD4L1Q9NU39 408 aa8.35□□□□□ -1.07
SSX9-202ENST00000608568 SYNJ2O15056 1496 aa8.34□□□□□ -1.07
SSX9-202ENST00000608568 SHROOM2Q13796 1616 aa8.34□□□□□ -1.07
SSX9-202ENST00000608568 KIF13AQ9H1H9 1805 aa8.33□□□□□ -1.08
SSX9-202ENST00000608568 TTBK1Q5TCY1 1321 aaPredicted RBP8.31□□□□□ -1.08
SSX9-202ENST00000608568 FBLN2P98095 1184 aa8.31□□□□□ -1.08
SSX9-202ENST00000608568 RUSC2Q8N2Y8 1516 aa8.3□□□□□ -1.08
SSX9-202ENST00000608568 GRIN2AQ12879 1464 aa8.3□□□□□ -1.08
SSX9-202ENST00000608568 WRNQ14191 1432 aaPredicted RBP eCLIP8.29□□□□□ -1.08
SSX9-202ENST00000608568 ERICH3Q5RHP9 1530 aa8.27□□□□□ -1.09
SSX9-202ENST00000608568 CYB5RLQ6IPT4 315 aa8.26□□□□□ -1.09
SSX9-202ENST00000608568 NUP160Q12769 1436 aa8.26□□□□□ -1.09
SSX9-202ENST00000608568 CUL7Q14999 1698 aa8.24□□□□□ -1.09
SSX9-202ENST00000608568 RNF216Q9NWF9 866 aaPredicted RBP8.23□□□□□ -1.09
SSX9-202ENST00000608568 CHMP7Q8WUX9 453 aaPredicted RBP8.22□□□□□ -1.09
SSX9-202ENST00000608568 FHAD1B1AJZ9 1412 aa8.21□□□□□ -1.09
SSX9-202ENST00000608568 TSPOAP1O95153 1857 aa8.21□□□□□ -1.1
SSX9-202ENST00000608568 ADCY10Q96PN6 1610 aa8.21□□□□□ -1.1
SSX9-202ENST00000608568 POTEHQ6S545 545 aa8.19□□□□□ -1.1
SSX9-202ENST00000608568 CTTNBP2Q8WZ74 1663 aa8.18□□□□□ -1.1
SSX9-202ENST00000608568 DIP2BQ9P265 1576 aa8.14□□□□□ -1.11
SSX9-202ENST00000608568 PPRC1Q5VV67 1664 aaKnown RBP8.14□□□□□ -1.11
SSX9-202ENST00000608568 PRG4Q92954 1404 aaPredicted RBP8.13□□□□□ -1.11
SSX9-202ENST00000608568 TRHP20396 242 aaPredicted RBP8.13□□□□□ -1.11
SSX9-202ENST00000608568 IQGAP2Q13576 1575 aa8.11□□□□□ -1.11
SSX9-202ENST00000608568 MAPKBP1O60336 1514 aa8.09□□□□□ -1.11
SSX9-202ENST00000608568 KIF27Q86VH2 1401 aa8.09□□□□□ -1.11
SSX9-202ENST00000608568 IGF1RP08069 1367 aa8.09□□□□□ -1.12
SSX9-202ENST00000608568 KIAA0586Q9BVV6 1533 aa8.08□□□□□ -1.12
SSX9-202ENST00000608568 FKBP8Q14318 412 aa8.08□□□□□ -1.12
SSX9-202ENST00000608568 KIAA0556O60303 1618 aa8.07□□□□□ -1.12
SSX9-202ENST00000608568 ABCC2Q92887 1545 aa8.07□□□□□ -1.12
SSX9-202ENST00000608568 ZCCHC11Q5TAX3 1644 aaKnown RBP8.07□□□□□ -1.12
SSX9-202ENST00000608568 DISP1Q96F81 1524 aa8.05□□□□□ -1.12
SSX9-202ENST00000608568 JPH4Q96JJ6 628 aa8.04□□□□□ -1.12
SSX9-202ENST00000608568 KDM6BO15054 1643 aa8.03□□□□□ -1.12
SSX9-202ENST00000608568 ABCC10Q5T3U5 1492 aa8.03□□□□□ -1.12
SSX9-202ENST00000608568 ATXN8OSP0DMR3 200 aa8.03□□□□□ -1.12
SSX9-202ENST00000608568 MAP3K4Q9Y6R4 1608 aa8.03□□□□□ -1.12
SSX9-202ENST00000608568 UGGT2Q9NYU1 1516 aa8.03□□□□□ -1.12
SSX9-202ENST00000608568 CARMIL1Q5VZK9 1371 aa8.02□□□□□ -1.13
SSX9-202ENST00000608568 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.02□□□□□ -1.13
SSX9-202ENST00000608568 ZEB1P37275 1124 aaPredicted RBP8□□□□□ -1.13
SSX9-202ENST00000608568 RAPGEF2Q9Y4G8 1499 aa8□□□□□ -1.13
SSX9-202ENST00000608568 GLI2P10070 1586 aa7.98□□□□□ -1.13
SSX9-202ENST00000608568 ABCA8O94911 1581 aa7.97□□□□□ -1.13
SSX9-202ENST00000608568 SLC4A2P04920 1241 aa7.97□□□□□ -1.13
SSX9-202ENST00000608568 SAMD9Q5K651 1589 aa7.97□□□□□ -1.13
SSX9-202ENST00000608568 UHRF1BP1LA0JNW5 1464 aa7.96□□□□□ -1.13
SSX9-202ENST00000608568 TNIKQ9UKE5 1360 aa7.96□□□□□ -1.14
SSX9-202ENST00000608568 CFAP43Q8NDM7 1665 aa7.95□□□□□ -1.14
SSX9-202ENST00000608568 PTPRGP23470 1445 aa7.95□□□□□ -1.14
SSX9-202ENST00000608568 PRXQ9BXM0 1461 aa7.95□□□□□ -1.14
SSX9-202ENST00000608568 KDM5BQ9UGL1 1544 aa7.95□□□□□ -1.14
SSX9-202ENST00000608568 ASXL2Q76L83 1435 aa7.95□□□□□ -1.14
SSX9-202ENST00000608568 PLB1Q6P1J6 1458 aa7.94□□□□□ -1.14
SSX9-202ENST00000608568 LRRIQ1Q96JM4 1722 aa7.94□□□□□ -1.14
SSX9-202ENST00000608568 CARMIL2Q6F5E8 1435 aa7.94□□□□□ -1.14
SSX9-202ENST00000608568 MYCNP04198 464 aaPredicted RBP7.93□□□□□ -1.14
SSX9-202ENST00000608568 FAM69CQ0P6D2 419 aa7.93□□□□□ -1.14
SSX9-202ENST00000608568 UACAQ9BZF9 1416 aa7.93□□□□□ -1.14
SSX9-202ENST00000608568 EPRSP07814 1512 aaKnown RBP7.93□□□□□ -1.14
SSX9-202ENST00000608568 KIF21BO75037 1637 aa7.92□□□□□ -1.14
SSX9-202ENST00000608568 RAPGEF6Q8TEU7 1601 aa7.92□□□□□ -1.14
SSX9-202ENST00000608568 COL17A1Q9UMD9 1497 aaPredicted RBP7.91□□□□□ -1.14
SSX9-202ENST00000608568 WDR7Q9Y4E6 1490 aa7.88□□□□□ -1.15
SSX9-202ENST00000608568 ABCA9Q8IUA7 1624 aa7.88□□□□□ -1.15
SSX9-202ENST00000608568 FRMPD1Q5SYB0 1578 aa7.88□□□□□ -1.15
SSX9-202ENST00000608568 SIGLEC1Q9BZZ2 1709 aa7.87□□□□□ -1.15
SSX9-202ENST00000608568 GOLGA3Q08378 1498 aa7.87□□□□□ -1.15
SSX9-202ENST00000608568 RICTORQ6R327 1708 aa7.86□□□□□ -1.15
SSX9-202ENST00000608568 NPM1P06748 294 aaKnown RBP eCLIP7.85□□□□□ -1.15
SSX9-202ENST00000608568 ADGRL1O94910 1474 aa7.85□□□□□ -1.15
SSX9-202ENST00000608568 TTC37Q6PGP7 1564 aa7.84□□□□□ -1.15
SSX9-202ENST00000608568 DSG3P32926 999 aa7.84□□□□□ -1.15
SSX9-202ENST00000608568 PCGF6Q9BYE7 350 aa7.84□□□□□ -1.15
SSX9-202ENST00000608568 FHOD3Q2V2M9 1422 aa7.83□□□□□ -1.16
SSX9-202ENST00000608568 ATP10BO94823 1461 aa7.82□□□□□ -1.16
SSX9-202ENST00000608568 NUP153P49790 1475 aaKnown RBP7.82□□□□□ -1.16
SSX9-202ENST00000608568 TEX14Q8IWB6 1497 aa7.82□□□□□ -1.16
SSX9-202ENST00000608568 KDM4FA0A1W2PPD8 638 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms