RNA–Protein interactions for RNA: ENST00000608284.1

HDDC2-203, Transcript of HD domain containing 2, humanhuman

TSL 3 BASIC

Gene HDDC2, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-203ENST00000608284 FAM69CQ0P6D2 419 aa27.86■■■□□ 2.05
HDDC2-203ENST00000608284 ABCC10Q5T3U5 1492 aa27.71■■■□□ 2.03
HDDC2-203ENST00000608284 KIF27Q86VH2 1401 aa27.7■■■□□ 2.03
HDDC2-203ENST00000608284 RUSC2Q8N2Y8 1516 aa27.7■■■□□ 2.02
HDDC2-203ENST00000608284 KIAA0586Q9BVV6 1533 aa27.68■■■□□ 2.02
HDDC2-203ENST00000608284 IGF1RP08069 1367 aa27.68■■■□□ 2.02
HDDC2-203ENST00000608284 KIF13AQ9H1H9 1805 aa27.67■■■□□ 2.02
HDDC2-203ENST00000608284 MAPKBP1O60336 1514 aa27.64■■■□□ 2.02
HDDC2-203ENST00000608284 TTBK1Q5TCY1 1321 aaPredicted RBP27.6■■■□□ 2.01
HDDC2-203ENST00000608284 PTPRGP23470 1445 aa27.58■■■□□ 2
HDDC2-203ENST00000608284 ADCY10Q96PN6 1610 aa27.55■■■□□ 2
HDDC2-203ENST00000608284 CUL7Q14999 1698 aa27.54■■■□□ 2
HDDC2-203ENST00000608284 CARMIL2Q6F5E8 1435 aa27.54■■■□□ 2
HDDC2-203ENST00000608284 CARMIL1Q5VZK9 1371 aa27.53■■■□□ 2
HDDC2-203ENST00000608284 DIP2BQ9P265 1576 aa27.52■■■□□ 2
HDDC2-203ENST00000608284 TNIKQ9UKE5 1360 aa27.48■■□□□ 1.99
HDDC2-203ENST00000608284 KDM6BO15054 1643 aa27.45■■□□□ 1.98
HDDC2-203ENST00000608284 KDM4FA0A1W2PPD8 638 aa27.38■■□□□ 1.97
HDDC2-203ENST00000608284 ABCC2Q92887 1545 aa27.37■■□□□ 1.97
HDDC2-203ENST00000608284 PLB1Q6P1J6 1458 aa27.37■■□□□ 1.97
HDDC2-203ENST00000608284 TSPOAP1O95153 1857 aa27.35■■□□□ 1.97
HDDC2-203ENST00000608284 ASXL2Q76L83 1435 aa27.33■■□□□ 1.96
HDDC2-203ENST00000608284 UACAQ9BZF9 1416 aa27.31■■□□□ 1.96
HDDC2-203ENST00000608284 IQGAP2Q13576 1575 aa27.31■■□□□ 1.96
HDDC2-203ENST00000608284 UHRF1BP1LA0JNW5 1464 aa27.27■■□□□ 1.96
HDDC2-203ENST00000608284 GLI2P10070 1586 aa27.22■■□□□ 1.95
HDDC2-203ENST00000608284 RAPGEF2Q9Y4G8 1499 aa27.2■■□□□ 1.95
HDDC2-203ENST00000608284 DISP1Q96F81 1524 aa27.17■■□□□ 1.94
HDDC2-203ENST00000608284 FAM9AQ8IZU1 332 aaPredicted RBP27.14■■□□□ 1.94
HDDC2-203ENST00000608284 TEX14Q8IWB6 1497 aa27.13■■□□□ 1.93
HDDC2-203ENST00000608284 KDM5BQ9UGL1 1544 aa27.13■■□□□ 1.93
HDDC2-203ENST00000608284 EPRSP07814 1512 aaKnown RBP27.12■■□□□ 1.93
HDDC2-203ENST00000608284 UGGT2Q9NYU1 1516 aa27.12■■□□□ 1.93
HDDC2-203ENST00000608284 ADGRL1O94910 1474 aa27.04■■□□□ 1.92
HDDC2-203ENST00000608284 PPRC1Q5VV67 1664 aaKnown RBP27.02■■□□□ 1.92
HDDC2-203ENST00000608284 KCNH8Q96L42 1107 aa27.02■■□□□ 1.92
HDDC2-203ENST00000608284 KIAA0556O60303 1618 aa27.01■■□□□ 1.92
HDDC2-203ENST00000608284 GOLGA3Q08378 1498 aa27.01■■□□□ 1.91
HDDC2-203ENST00000608284 ZCCHC11Q5TAX3 1644 aaKnown RBP27■■□□□ 1.91
HDDC2-203ENST00000608284 COL17A1Q9UMD9 1497 aaPredicted RBP27■■□□□ 1.91
HDDC2-203ENST00000608284 WDR7Q9Y4E6 1490 aa27■■□□□ 1.91
HDDC2-203ENST00000608284 MAP3K4Q9Y6R4 1608 aa26.98■■□□□ 1.91
HDDC2-203ENST00000608284 CD109Q6YHK3 1445 aa26.95■■□□□ 1.9
HDDC2-203ENST00000608284 ILDR1Q86SU0 546 aaPredicted RBP26.92■■□□□ 1.9
HDDC2-203ENST00000608284 MAGI3Q5TCQ9 1506 aa26.85■■□□□ 1.89
HDDC2-203ENST00000608284 CTTNBP2Q8WZ74 1663 aa26.82■■□□□ 1.88
HDDC2-203ENST00000608284 P3H3Q8IVL6 736 aa26.8■■□□□ 1.88
HDDC2-203ENST00000608284 ABCA8O94911 1581 aa26.8■■□□□ 1.88
HDDC2-203ENST00000608284 ARID3CA6NKF2 412 aa26.79■■□□□ 1.88
HDDC2-203ENST00000608284 PRXQ9BXM0 1461 aa26.78■■□□□ 1.88
HDDC2-203ENST00000608284 CFAP43Q8NDM7 1665 aa26.77■■□□□ 1.88
HDDC2-203ENST00000608284 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.74■■□□□ 1.87
HDDC2-203ENST00000608284 HNRNPUL2Q1KMD3 747 aaKnown RBP26.74■■□□□ 1.87
HDDC2-203ENST00000608284 HECW2Q9P2P5 1572 aa26.71■■□□□ 1.87
HDDC2-203ENST00000608284 PHLDB1Q86UU1 1377 aa26.71■■□□□ 1.87
HDDC2-203ENST00000608284 CSRNP3Q8WYN3 585 aa26.67■■□□□ 1.86
HDDC2-203ENST00000608284 ATP10BO94823 1461 aa26.66■■□□□ 1.86
HDDC2-203ENST00000608284 ARAP3Q8WWN8 1544 aa26.65■■□□□ 1.86
HDDC2-203ENST00000608284 RAPGEF3O95398 923 aa26.58■■□□□ 1.85
HDDC2-203ENST00000608284 ARID4BQ4LE39 1312 aaPredicted RBP26.58■■□□□ 1.85
HDDC2-203ENST00000608284 RANGAP1P46060 587 aaPredicted RBP26.57■■□□□ 1.84
HDDC2-203ENST00000608284 PLEKHD1A6NEE1 506 aa26.54■■□□□ 1.84
HDDC2-203ENST00000608284 KIF21BO75037 1637 aa26.53■■□□□ 1.84
HDDC2-203ENST00000608284 NEO1Q92859 1461 aa26.52■■□□□ 1.84
HDDC2-203ENST00000608284 ABCA9Q8IUA7 1624 aa26.5■■□□□ 1.83
HDDC2-203ENST00000608284 RAPGEF6Q8TEU7 1601 aa26.47■■□□□ 1.83
HDDC2-203ENST00000608284 SAMD9Q5K651 1589 aa26.45■■□□□ 1.82
HDDC2-203ENST00000608284 PTPRMP28827 1452 aa26.44■■□□□ 1.82
HDDC2-203ENST00000608284 EEA1Q15075 1411 aa26.44■■□□□ 1.82
HDDC2-203ENST00000608284 FBXO41Q8TF61 875 aa26.42■■□□□ 1.82
HDDC2-203ENST00000608284 NUP153P49790 1475 aaKnown RBP26.38■■□□□ 1.81
HDDC2-203ENST00000608284 FHOD3Q2V2M9 1422 aa26.38■■□□□ 1.81
HDDC2-203ENST00000608284 DENND4BO75064 1496 aaPredicted RBP26.37■■□□□ 1.81
HDDC2-203ENST00000608284 ADAMTSL3P82987 1691 aa26.34■■□□□ 1.81
HDDC2-203ENST00000608284 AKNAQ7Z591 1439 aa26.34■■□□□ 1.81
HDDC2-203ENST00000608284 POGZQ7Z3K3 1410 aa26.31■■□□□ 1.8
HDDC2-203ENST00000608284 FANCAO15360 1455 aa26.3■■□□□ 1.8
HDDC2-203ENST00000608284 PLPPR3Q6T4P5 718 aa26.29■■□□□ 1.8
HDDC2-203ENST00000608284 ATP1B4Q9UN42 357 aaPredicted RBP26.28■■□□□ 1.8
HDDC2-203ENST00000608284 BCORL1Q5H9F3 1711 aa26.27■■□□□ 1.8
HDDC2-203ENST00000608284 CFAP74Q9C0B2 1584 aa26.24■■□□□ 1.79
HDDC2-203ENST00000608284 FRMPD1Q5SYB0 1578 aa26.24■■□□□ 1.79
HDDC2-203ENST00000608284 CDK11AQ9UQ88 783 aaPredicted RBP26.23■■□□□ 1.79
HDDC2-203ENST00000608284 MADDQ8WXG6 1647 aa26.23■■□□□ 1.79
HDDC2-203ENST00000608284 EFCAB5A4FU69 1503 aa26.23■■□□□ 1.79
HDDC2-203ENST00000608284 UBTFP17480 764 aaKnown RBP26.22■■□□□ 1.79
HDDC2-203ENST00000608284 PCF11O94913 1555 aaKnown RBP26.21■■□□□ 1.79
HDDC2-203ENST00000608284 MLECQ14165 292 aa26.21■■□□□ 1.79
HDDC2-203ENST00000608284 ARHGEF40Q8TER5 1519 aa26.2■■□□□ 1.79
HDDC2-203ENST00000608284 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.19■■□□□ 1.785e-7■■■□□ 15.7
HDDC2-203ENST00000608284 MAGI2Q86UL8 1455 aa26.18■■□□□ 1.78
HDDC2-203ENST00000608284 EFCAB2Q5VUJ9 269 aa26.17■■□□□ 1.78
HDDC2-203ENST00000608284 LMTK3Q96Q04 1460 aa26.17■■□□□ 1.78
HDDC2-203ENST00000608284 SCAPERQ9BY12 1400 aa26.15■■□□□ 1.78
HDDC2-203ENST00000608284 ZFYVE16Q7Z3T8 1539 aa26.15■■□□□ 1.78
HDDC2-203ENST00000608284 HSPA2P54652 639 aa26.15■■□□□ 1.78
HDDC2-203ENST00000608284 EHMT2Q96KQ7 1210 aa26.14■■□□□ 1.78
HDDC2-203ENST00000608284 RICTORQ6R327 1708 aa26.14■■□□□ 1.77
HDDC2-203ENST00000608284 PLCH2O75038 1416 aa26.14■■□□□ 1.77
HDDC2-203ENST00000608284 RIMS1Q86UR5 1692 aaKnown RBP26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms