RNA–Protein interactions for RNA: ENST00000606538.5

POLR2F-213, Transcript of RNA polymerase II subunit F, humanhuman

TSL 2 BASIC

Gene POLR2F, Length 760 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2F-213ENST00000606538 CEP170Q5SW79 1584 aa22.06■■□□□ 1.12
POLR2F-213ENST00000606538 CSRNP3Q8WYN3 585 aa22.05■■□□□ 1.12
POLR2F-213ENST00000606538 NUP160Q12769 1436 aa22.05■■□□□ 1.12
POLR2F-213ENST00000606538 PRXQ9BXM0 1461 aa22.04■■□□□ 1.12
POLR2F-213ENST00000606538 CLASP1Q7Z460 1538 aa22.04■■□□□ 1.12
POLR2F-213ENST00000606538 FAM9AQ8IZU1 332 aaPredicted RBP22.03■■□□□ 1.12
POLR2F-213ENST00000606538 RAPGEF2Q9Y4G8 1499 aa22.02■■□□□ 1.12
POLR2F-213ENST00000606538 KIF21BO75037 1637 aa21.91■■□□□ 1.1
POLR2F-213ENST00000606538 SHROOM2Q13796 1616 aa21.88■■□□□ 1.09
POLR2F-213ENST00000606538 KIAA0586Q9BVV6 1533 aa21.88■■□□□ 1.09
POLR2F-213ENST00000606538 CTTNBP2Q8WZ74 1663 aa21.85■■□□□ 1.09
POLR2F-213ENST00000606538 RIMBP3CA6NJZ7 1639 aa21.82■■□□□ 1.08
POLR2F-213ENST00000606538 RIMBP3BA6NNM3 1639 aa21.82■■□□□ 1.08
POLR2F-213ENST00000606538 RIMBP3Q9UFD9 1639 aa21.82■■□□□ 1.08
POLR2F-213ENST00000606538 ARHGEF11O15085 1522 aa21.81■■□□□ 1.08
POLR2F-213ENST00000606538 IQGAP2Q13576 1575 aa21.81■■□□□ 1.08
POLR2F-213ENST00000606538 JPH4Q96JJ6 628 aa21.8■■□□□ 1.08
POLR2F-213ENST00000606538 ERCC6L2Q5T890 1561 aa21.78■■□□□ 1.08
POLR2F-213ENST00000606538 GOLGA3Q08378 1498 aa21.76■■□□□ 1.07
POLR2F-213ENST00000606538 PRG4Q92954 1404 aaPredicted RBP21.73■■□□□ 1.07
POLR2F-213ENST00000606538 UGGT2Q9NYU1 1516 aa21.71■■□□□ 1.07
POLR2F-213ENST00000606538 EHMT2Q96KQ7 1210 aa21.71■■□□□ 1.07
POLR2F-213ENST00000606538 ARAP1Q96P48 1450 aa21.68■■□□□ 1.06
POLR2F-213ENST00000606538 DISP1Q96F81 1524 aa21.67■■□□□ 1.06
POLR2F-213ENST00000606538 UBTFP17480 764 aaKnown RBP21.64■■□□□ 1.05
POLR2F-213ENST00000606538 KIAA0556O60303 1618 aa21.61■■□□□ 1.05
POLR2F-213ENST00000606538 CARMIL2Q6F5E8 1435 aa21.59■■□□□ 1.05
POLR2F-213ENST00000606538 SAMD9Q5K651 1589 aa21.58■■□□□ 1.05
POLR2F-213ENST00000606538 CYB5RLQ6IPT4 315 aa21.57■■□□□ 1.04
POLR2F-213ENST00000606538 LOC105371045A0A1W2PR82 267 aa21.55■■□□□ 1.04
POLR2F-213ENST00000606538 TNIKQ9UKE5 1360 aa21.54■■□□□ 1.04
POLR2F-213ENST00000606538 RANGAP1P46060 587 aaPredicted RBP21.51■■□□□ 1.03
POLR2F-213ENST00000606538 PTPRGP23470 1445 aa21.49■■□□□ 1.03
POLR2F-213ENST00000606538 EFCAB5A4FU69 1503 aa21.49■■□□□ 1.03
POLR2F-213ENST00000606538 P3H3Q8IVL6 736 aa21.47■■□□□ 1.03
POLR2F-213ENST00000606538 ARHGAP35Q9NRY4 1499 aa21.46■■□□□ 1.03
POLR2F-213ENST00000606538 TTBK1Q5TCY1 1321 aaPredicted RBP21.43■■□□□ 1.02
POLR2F-213ENST00000606538 FHOD3Q2V2M9 1422 aa21.43■■□□□ 1.02
POLR2F-213ENST00000606538 ADCY10Q96PN6 1610 aa21.42■■□□□ 1.02
POLR2F-213ENST00000606538 CLIP1P30622 1438 aa21.38■■□□□ 1.01
POLR2F-213ENST00000606538 ABCA8O94911 1581 aa21.37■■□□□ 1.01
POLR2F-213ENST00000606538 PLB1Q6P1J6 1458 aa21.37■■□□□ 1.01
POLR2F-213ENST00000606538 UACAQ9BZF9 1416 aa21.37■■□□□ 1.01
POLR2F-213ENST00000606538 UHRF1BP1LA0JNW5 1464 aa21.36■■□□□ 1.01
POLR2F-213ENST00000606538 CEP162Q5TB80 1403 aa21.36■■□□□ 1.01
POLR2F-213ENST00000606538 ABCC2Q92887 1545 aa21.34■■□□□ 1.01
POLR2F-213ENST00000606538 RAPGEF6Q8TEU7 1601 aa21.29■■□□□ 1
POLR2F-213ENST00000606538 POTEDQ86YR6 584 aa21.28■■□□□ 1
POLR2F-213ENST00000606538 KDM5BQ9UGL1 1544 aa21.26■□□□□ 0.99
POLR2F-213ENST00000606538 FMN1Q68DA7 1419 aa21.25■□□□□ 0.99
POLR2F-213ENST00000606538 ZCCHC11Q5TAX3 1644 aaKnown RBP21.24■□□□□ 0.99
POLR2F-213ENST00000606538 NUP153P49790 1475 aaKnown RBP21.22■□□□□ 0.99
POLR2F-213ENST00000606538 MAPKBP1O60336 1514 aa21.19■□□□□ 0.98
POLR2F-213ENST00000606538 ATP10BO94823 1461 aa21.19■□□□□ 0.98
POLR2F-213ENST00000606538 NPM1P06748 294 aaKnown RBP eCLIP21.18■□□□□ 0.98
POLR2F-213ENST00000606538 PCF11O94913 1555 aaKnown RBP21.18■□□□□ 0.98
POLR2F-213ENST00000606538 LRRIQ1Q96JM4 1722 aa21.18■□□□□ 0.98
POLR2F-213ENST00000606538 CASKIN1Q8WXD9 1431 aa21.15■□□□□ 0.98
POLR2F-213ENST00000606538 HECW1Q76N89 1606 aa21.15■□□□□ 0.98
POLR2F-213ENST00000606538 ARID3CA6NKF2 412 aa21.14■□□□□ 0.97
POLR2F-213ENST00000606538 ASXL2Q76L83 1435 aa21.12■□□□□ 0.97
POLR2F-213ENST00000606538 FYCO1Q9BQS8 1478 aa21.11■□□□□ 0.97
POLR2F-213ENST00000606538 EPRSP07814 1512 aaKnown RBP21.1■□□□□ 0.97
POLR2F-213ENST00000606538 CDK13Q14004 1512 aaKnown RBP21.1■□□□□ 0.97
POLR2F-213ENST00000606538 KIF13AQ9H1H9 1805 aa21.08■□□□□ 0.97
POLR2F-213ENST00000606538 VPS8Q8N3P4 1428 aa21.08■□□□□ 0.97
POLR2F-213ENST00000606538 ATP1B4Q9UN42 357 aaPredicted RBP21.07■□□□□ 0.96
POLR2F-213ENST00000606538 ABCC10Q5T3U5 1492 aa21.06■□□□□ 0.96
POLR2F-213ENST00000606538 WDR7Q9Y4E6 1490 aa21.06■□□□□ 0.96
POLR2F-213ENST00000606538 DIP2BQ9P265 1576 aa21.06■□□□□ 0.96
POLR2F-213ENST00000606538 CCDC18Q5T9S5 1454 aa21.01■□□□□ 0.95
POLR2F-213ENST00000606538 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.01■□□□□ 0.95
POLR2F-213ENST00000606538 HNRNPUL2Q1KMD3 747 aaKnown RBP21.01■□□□□ 0.95
POLR2F-213ENST00000606538 TRHP20396 242 aaPredicted RBP20.99■□□□□ 0.95
POLR2F-213ENST00000606538 GLI2P10070 1586 aa20.98■□□□□ 0.95
POLR2F-213ENST00000606538 MAGI3Q5TCQ9 1506 aa20.97■□□□□ 0.95
POLR2F-213ENST00000606538 PLEKHD1A6NEE1 506 aa20.96■□□□□ 0.95
POLR2F-213ENST00000606538 FAM69CQ0P6D2 419 aa20.96■□□□□ 0.95
POLR2F-213ENST00000606538 KCNH8Q96L42 1107 aa20.94■□□□□ 0.94
POLR2F-213ENST00000606538 CFAP43Q8NDM7 1665 aa20.93■□□□□ 0.94
POLR2F-213ENST00000606538 MAP3K4Q9Y6R4 1608 aa20.93■□□□□ 0.94
POLR2F-213ENST00000606538 TROQ12816 1431 aaPredicted RBP20.91■□□□□ 0.94
POLR2F-213ENST00000606538 ABCA9Q8IUA7 1624 aa20.9■□□□□ 0.94
POLR2F-213ENST00000606538 TIAM1Q13009 1591 aa20.9■□□□□ 0.94
POLR2F-213ENST00000606538 CDK11AQ9UQ88 783 aaPredicted RBP20.9■□□□□ 0.94
POLR2F-213ENST00000606538 PPRC1Q5VV67 1664 aaKnown RBP20.89■□□□□ 0.93
POLR2F-213ENST00000606538 KIF14Q15058 1648 aa20.89■□□□□ 0.93
POLR2F-213ENST00000606538 MAP3K1Q13233 1512 aa20.88■□□□□ 0.93
POLR2F-213ENST00000606538 TSPOAP1O95153 1857 aa20.88■□□□□ 0.93
POLR2F-213ENST00000606538 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.88■□□□□ 0.932e-10■■■■■ 58.5
POLR2F-213ENST00000606538 TTC37Q6PGP7 1564 aa20.85■□□□□ 0.93
POLR2F-213ENST00000606538 CD109Q6YHK3 1445 aa20.82■□□□□ 0.92
POLR2F-213ENST00000606538 EHBP1L1Q8N3D4 1523 aa20.81■□□□□ 0.92
POLR2F-213ENST00000606538 LRRC9Q6ZRR7 1453 aa20.81■□□□□ 0.92
POLR2F-213ENST00000606538 KANK4Q5T7N3 995 aaPredicted RBP20.8■□□□□ 0.92
POLR2F-213ENST00000606538 MTUS2Q5JR59 1369 aa20.8■□□□□ 0.92
POLR2F-213ENST00000606538 MYO5CQ9NQX4 1742 aa20.75■□□□□ 0.91
POLR2F-213ENST00000606538 CDC42BPAQ5VT25 1732 aa20.74■□□□□ 0.91
POLR2F-213ENST00000606538 SUPT6HQ7KZ85 1726 aaKnown RBP20.73■□□□□ 0.91
POLR2F-213ENST00000606538 CDC42BPBQ9Y5S2 1711 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms