RNA–Protein interactions for RNA: ENST00000603669.5

GRAMD1A-213, Transcript of GRAM domain containing 1A, humanhuman

TSL 5

Gene GRAMD1A, Length 552 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-213ENST00000603669 NPM1P06748 294 aaKnown RBP eCLIP27.07■■□□□ 1.92
GRAMD1A-213ENST00000603669 KIF13AQ9H1H9 1805 aa27.06■■□□□ 1.92
GRAMD1A-213ENST00000603669 ABCC10Q5T3U5 1492 aa26.99■■□□□ 1.91
GRAMD1A-213ENST00000603669 RUSC2Q8N2Y8 1516 aa26.97■■□□□ 1.91
GRAMD1A-213ENST00000603669 IGF1RP08069 1367 aa26.94■■□□□ 1.9
GRAMD1A-213ENST00000603669 MAPKBP1O60336 1514 aa26.9■■□□□ 1.9
GRAMD1A-213ENST00000603669 KIAA0586Q9BVV6 1533 aa26.89■■□□□ 1.89
GRAMD1A-213ENST00000603669 ADCY10Q96PN6 1610 aa26.88■■□□□ 1.89
GRAMD1A-213ENST00000603669 DIP2BQ9P265 1576 aa26.84■■□□□ 1.89
GRAMD1A-213ENST00000603669 TTBK1Q5TCY1 1321 aaPredicted RBP26.84■■□□□ 1.89
GRAMD1A-213ENST00000603669 KIF27Q86VH2 1401 aa26.82■■□□□ 1.88
GRAMD1A-213ENST00000603669 KDM4FA0A1W2PPD8 638 aa26.8■■□□□ 1.88
GRAMD1A-213ENST00000603669 PTPRGP23470 1445 aa26.77■■□□□ 1.88
GRAMD1A-213ENST00000603669 KDM6BO15054 1643 aa26.72■■□□□ 1.87
GRAMD1A-213ENST00000603669 CARMIL1Q5VZK9 1371 aa26.71■■□□□ 1.87
GRAMD1A-213ENST00000603669 TSPOAP1O95153 1857 aa26.7■■□□□ 1.86
GRAMD1A-213ENST00000603669 CUL7Q14999 1698 aa26.7■■□□□ 1.86
GRAMD1A-213ENST00000603669 TNIKQ9UKE5 1360 aa26.66■■□□□ 1.86
GRAMD1A-213ENST00000603669 CARMIL2Q6F5E8 1435 aa26.64■■□□□ 1.85
GRAMD1A-213ENST00000603669 ABCC2Q92887 1545 aa26.6■■□□□ 1.85
GRAMD1A-213ENST00000603669 ASXL2Q76L83 1435 aa26.59■■□□□ 1.85
GRAMD1A-213ENST00000603669 PLB1Q6P1J6 1458 aa26.55■■□□□ 1.84
GRAMD1A-213ENST00000603669 UACAQ9BZF9 1416 aa26.52■■□□□ 1.84
GRAMD1A-213ENST00000603669 IQGAP2Q13576 1575 aa26.5■■□□□ 1.83
GRAMD1A-213ENST00000603669 UHRF1BP1LA0JNW5 1464 aa26.49■■□□□ 1.83
GRAMD1A-213ENST00000603669 GLI2P10070 1586 aa26.48■■□□□ 1.83
GRAMD1A-213ENST00000603669 DISP1Q96F81 1524 aa26.48■■□□□ 1.83
GRAMD1A-213ENST00000603669 COL17A1Q9UMD9 1497 aaPredicted RBP26.45■■□□□ 1.82
GRAMD1A-213ENST00000603669 PPRC1Q5VV67 1664 aaKnown RBP26.44■■□□□ 1.82
GRAMD1A-213ENST00000603669 EPRSP07814 1512 aaKnown RBP26.4■■□□□ 1.82
GRAMD1A-213ENST00000603669 KDM5BQ9UGL1 1544 aa26.39■■□□□ 1.82
GRAMD1A-213ENST00000603669 ILDR1Q86SU0 546 aaPredicted RBP26.38■■□□□ 1.81
GRAMD1A-213ENST00000603669 ADGRL1O94910 1474 aa26.37■■□□□ 1.81
GRAMD1A-213ENST00000603669 RAPGEF2Q9Y4G8 1499 aa26.37■■□□□ 1.81
GRAMD1A-213ENST00000603669 UGGT2Q9NYU1 1516 aa26.35■■□□□ 1.81
GRAMD1A-213ENST00000603669 MAP3K4Q9Y6R4 1608 aa26.3■■□□□ 1.8
GRAMD1A-213ENST00000603669 ZCCHC11Q5TAX3 1644 aaKnown RBP26.29■■□□□ 1.8
GRAMD1A-213ENST00000603669 TEX14Q8IWB6 1497 aa26.29■■□□□ 1.8
GRAMD1A-213ENST00000603669 KIAA0556O60303 1618 aa26.27■■□□□ 1.8
GRAMD1A-213ENST00000603669 KCNH8Q96L42 1107 aa26.26■■□□□ 1.79
GRAMD1A-213ENST00000603669 WDR7Q9Y4E6 1490 aa26.23■■□□□ 1.79
GRAMD1A-213ENST00000603669 CD109Q6YHK3 1445 aa26.17■■□□□ 1.78
GRAMD1A-213ENST00000603669 GOLGA3Q08378 1498 aa26.11■■□□□ 1.77
GRAMD1A-213ENST00000603669 MAGI3Q5TCQ9 1506 aa26.1■■□□□ 1.77
GRAMD1A-213ENST00000603669 HECW2Q9P2P5 1572 aa26.1■■□□□ 1.77
GRAMD1A-213ENST00000603669 ABCA8O94911 1581 aa26.09■■□□□ 1.77
GRAMD1A-213ENST00000603669 ARID3CA6NKF2 412 aa26.09■■□□□ 1.77
GRAMD1A-213ENST00000603669 P3H3Q8IVL6 736 aa26.06■■□□□ 1.76
GRAMD1A-213ENST00000603669 CTTNBP2Q8WZ74 1663 aa26.04■■□□□ 1.76
GRAMD1A-213ENST00000603669 PRXQ9BXM0 1461 aa26.02■■□□□ 1.76
GRAMD1A-213ENST00000603669 CFAP43Q8NDM7 1665 aa26.01■■□□□ 1.75
GRAMD1A-213ENST00000603669 FAM9AQ8IZU1 332 aaPredicted RBP25.97■■□□□ 1.75
GRAMD1A-213ENST00000603669 ATP10BO94823 1461 aa25.95■■□□□ 1.74
GRAMD1A-213ENST00000603669 ARAP3Q8WWN8 1544 aa25.91■■□□□ 1.74
GRAMD1A-213ENST00000603669 RAPGEF3O95398 923 aa25.9■■□□□ 1.74
GRAMD1A-213ENST00000603669 KIF21BO75037 1637 aa25.89■■□□□ 1.74
GRAMD1A-213ENST00000603669 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.86■■□□□ 1.73
GRAMD1A-213ENST00000603669 HNRNPUL2Q1KMD3 747 aaKnown RBP25.86■■□□□ 1.73
GRAMD1A-213ENST00000603669 CSRNP3Q8WYN3 585 aa25.83■■□□□ 1.73
GRAMD1A-213ENST00000603669 PHLDB1Q86UU1 1377 aa25.82■■□□□ 1.72
GRAMD1A-213ENST00000603669 RANGAP1P46060 587 aaPredicted RBP25.8■■□□□ 1.72
GRAMD1A-213ENST00000603669 ABCA9Q8IUA7 1624 aa25.78■■□□□ 1.72
GRAMD1A-213ENST00000603669 PTPRMP28827 1452 aa25.77■■□□□ 1.72
GRAMD1A-213ENST00000603669 ARID4BQ4LE39 1312 aaPredicted RBP25.76■■□□□ 1.71
GRAMD1A-213ENST00000603669 FBXO41Q8TF61 875 aa25.73■■□□□ 1.71
GRAMD1A-213ENST00000603669 NEO1Q92859 1461 aa25.72■■□□□ 1.71
GRAMD1A-213ENST00000603669 SAMD9Q5K651 1589 aa25.71■■□□□ 1.71
GRAMD1A-213ENST00000603669 ADAMTSL3P82987 1691 aa25.71■■□□□ 1.71
GRAMD1A-213ENST00000603669 RAPGEF6Q8TEU7 1601 aa25.7■■□□□ 1.71
GRAMD1A-213ENST00000603669 NUP153P49790 1475 aaKnown RBP25.68■■□□□ 1.7
GRAMD1A-213ENST00000603669 PLEKHD1A6NEE1 506 aa25.67■■□□□ 1.7
GRAMD1A-213ENST00000603669 FRMPD1Q5SYB0 1578 aa25.64■■□□□ 1.69
GRAMD1A-213ENST00000603669 FHOD3Q2V2M9 1422 aa25.63■■□□□ 1.69
GRAMD1A-213ENST00000603669 BCORL1Q5H9F3 1711 aa25.6■■□□□ 1.69
GRAMD1A-213ENST00000603669 PLPPR3Q6T4P5 718 aa25.59■■□□□ 1.69
GRAMD1A-213ENST00000603669 DENND4BO75064 1496 aaPredicted RBP25.59■■□□□ 1.69
GRAMD1A-213ENST00000603669 MADDQ8WXG6 1647 aa25.59■■□□□ 1.69
GRAMD1A-213ENST00000603669 AKNAQ7Z591 1439 aa25.58■■□□□ 1.69
GRAMD1A-213ENST00000603669 LMTK3Q96Q04 1460 aa25.55■■□□□ 1.68
GRAMD1A-213ENST00000603669 PCF11O94913 1555 aaKnown RBP25.54■■□□□ 1.68
GRAMD1A-213ENST00000603669 HSPA2P54652 639 aa25.54■■□□□ 1.68
GRAMD1A-213ENST00000603669 FANCAO15360 1455 aa25.53■■□□□ 1.68
GRAMD1A-213ENST00000603669 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.5■■□□□ 1.671e-10■■■■□ 24.8
GRAMD1A-213ENST00000603669 MLECQ14165 292 aa25.49■■□□□ 1.67
GRAMD1A-213ENST00000603669 ARHGEF40Q8TER5 1519 aa25.48■■□□□ 1.67
GRAMD1A-213ENST00000603669 EEA1Q15075 1411 aa25.48■■□□□ 1.67
GRAMD1A-213ENST00000603669 RICTORQ6R327 1708 aa25.48■■□□□ 1.67
GRAMD1A-213ENST00000603669 YEATS2Q9ULM3 1422 aa25.47■■□□□ 1.67
GRAMD1A-213ENST00000603669 RIMS1Q86UR5 1692 aaKnown RBP25.47■■□□□ 1.67
GRAMD1A-213ENST00000603669 POGZQ7Z3K3 1410 aa25.44■■□□□ 1.66
GRAMD1A-213ENST00000603669 TTC37Q6PGP7 1564 aa25.43■■□□□ 1.66
GRAMD1A-213ENST00000603669 EHMT2Q96KQ7 1210 aa25.42■■□□□ 1.66
GRAMD1A-213ENST00000603669 ATP1B4Q9UN42 357 aaPredicted RBP25.42■■□□□ 1.66
GRAMD1A-213ENST00000603669 SCAPERQ9BY12 1400 aa25.4■■□□□ 1.66
GRAMD1A-213ENST00000603669 CDK13Q14004 1512 aaKnown RBP25.4■■□□□ 1.66
GRAMD1A-213ENST00000603669 ZFYVE16Q7Z3T8 1539 aa25.4■■□□□ 1.66
GRAMD1A-213ENST00000603669 CFAP74Q9C0B2 1584 aa25.39■■□□□ 1.65
GRAMD1A-213ENST00000603669 PLCH2O75038 1416 aa25.38■■□□□ 1.65
GRAMD1A-213ENST00000603669 ZMYM4Q5VZL5 1548 aa25.38■■□□□ 1.65
GRAMD1A-213ENST00000603669 SIGLEC1Q9BZZ2 1709 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms